RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
DNMT3A-214ENST00000491288 BLMP54132 1417 aaPredicted RBP19.04■□□□□ 0.64
DNMT3A-214ENST00000491288 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
DNMT3A-214ENST00000491288 SEPT12Q8IYM1 358 aa19.04■□□□□ 0.64
DNMT3A-214ENST00000491288 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
DNMT3A-214ENST00000491288 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
DNMT3A-214ENST00000491288 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
DNMT3A-214ENST00000491288 LMOD2Q6P5Q4 547 aa19.02■□□□□ 0.64
DNMT3A-214ENST00000491288 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
DNMT3A-214ENST00000491288 TRPM3Q9HCF6 1732 aaPredicted RBP19.02■□□□□ 0.63
DNMT3A-214ENST00000491288 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
DNMT3A-214ENST00000491288 NUDT16Q96DE0 195 aaKnown RBP19.01■□□□□ 0.63
DNMT3A-214ENST00000491288 ALS2Q96Q42 1657 aa18.99■□□□□ 0.63
DNMT3A-214ENST00000491288 ATP7BP35670 1465 aa18.99■□□□□ 0.63
DNMT3A-214ENST00000491288 PLCH1Q4KWH8 1693 aa18.98■□□□□ 0.63
DNMT3A-214ENST00000491288 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
DNMT3A-214ENST00000491288 KRT27Q7Z3Y8 459 aa18.97■□□□□ 0.63
DNMT3A-214ENST00000491288 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
DNMT3A-214ENST00000491288 BTG4Q9NY30 223 aa18.97■□□□□ 0.63
DNMT3A-214ENST00000491288 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
DNMT3A-214ENST00000491288 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
DNMT3A-214ENST00000491288 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
DNMT3A-214ENST00000491288 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
DNMT3A-214ENST00000491288 POLR3AO14802 1390 aaPredicted RBP18.94■□□□□ 0.62
DNMT3A-214ENST00000491288 DEFB132Q7Z7B7 95 aa18.94■□□□□ 0.62
DNMT3A-214ENST00000491288 CCDC9Q9Y3X0 531 aaKnown RBP18.94■□□□□ 0.62
DNMT3A-214ENST00000491288 SPATA31A5Q5VU36 1347 aa18.94■□□□□ 0.62
DNMT3A-214ENST00000491288 SPATA31A7Q8IWB4 1347 aa18.94■□□□□ 0.62
DNMT3A-214ENST00000491288 NRAPQ86VF7 1730 aa18.94■□□□□ 0.62
DNMT3A-214ENST00000491288 USP47Q96K76 1375 aa18.93■□□□□ 0.62
DNMT3A-214ENST00000491288 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
DNMT3A-214ENST00000491288 COL14A1Q05707 1796 aaKnown RBP18.92■□□□□ 0.62
DNMT3A-214ENST00000491288 EIF4G2P78344 907 aaKnown RBP eCLIP18.92■□□□□ 0.62
DNMT3A-214ENST00000491288 FAM98CQ17RN3 349 aaKnown RBP18.92■□□□□ 0.62
DNMT3A-214ENST00000491288 BRWD3Q6RI45 1802 aa18.92■□□□□ 0.62
DNMT3A-214ENST00000491288 SBNO2Q9Y2G9 1366 aa18.92■□□□□ 0.62
DNMT3A-214ENST00000491288 CRYBG1Q9Y4K1 1723 aa18.91■□□□□ 0.62
DNMT3A-214ENST00000491288 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
DNMT3A-214ENST00000491288 TMF1P82094 1093 aa18.9■□□□□ 0.62
DNMT3A-214ENST00000491288 SF3B2Q13435 895 aaKnown RBP18.89■□□□□ 0.61
DNMT3A-214ENST00000491288 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
DNMT3A-214ENST00000491288 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
DNMT3A-214ENST00000491288 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
DNMT3A-214ENST00000491288 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
DNMT3A-214ENST00000491288 ACEP12821 1306 aa18.88■□□□□ 0.61
DNMT3A-214ENST00000491288 KIAA0232Q92628 1395 aa18.88■□□□□ 0.61
DNMT3A-214ENST00000491288 ITSN1Q15811 1721 aa18.87■□□□□ 0.61
DNMT3A-214ENST00000491288 TESK2Q96S53 571 aa18.87■□□□□ 0.61
DNMT3A-214ENST00000491288 PPIP5K1Q6PFW1 1433 aa18.86■□□□□ 0.61
DNMT3A-214ENST00000491288 SPATA31A1Q5TZJ5 1347 aa18.86■□□□□ 0.61
DNMT3A-214ENST00000491288 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
DNMT3A-214ENST00000491288 THSD7AQ9UPZ6 1657 aa18.85■□□□□ 0.61
DNMT3A-214ENST00000491288 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
DNMT3A-214ENST00000491288 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
DNMT3A-214ENST00000491288 USP19O94966 1318 aa18.84■□□□□ 0.61
DNMT3A-214ENST00000491288 HSPA5P11021 654 aaKnown RBP18.84■□□□□ 0.61
DNMT3A-214ENST00000491288 DISP2A7MBM2 1401 aa18.83■□□□□ 0.61
DNMT3A-214ENST00000491288 CPDO75976 1380 aa18.83■□□□□ 0.61
DNMT3A-214ENST00000491288 BAG6P46379 1132 aa18.83■□□□□ 0.6
DNMT3A-214ENST00000491288 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
DNMT3A-214ENST00000491288 A0A0G2JS52 829 aa18.82■□□□□ 0.6
DNMT3A-214ENST00000491288 ZC3H6P61129 1189 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-214ENST00000491288 MYT1Q01538 1121 aa18.82■□□□□ 0.6
DNMT3A-214ENST00000491288 CHRNA2Q15822 529 aa18.82■□□□□ 0.6
DNMT3A-214ENST00000491288 BARGINQ6ZT62 677 aa18.81■□□□□ 0.6
DNMT3A-214ENST00000491288 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-214ENST00000491288 FAM182BQ5T319 152 aa18.8■□□□□ 0.6
DNMT3A-214ENST00000491288 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
DNMT3A-214ENST00000491288 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
DNMT3A-214ENST00000491288 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
DNMT3A-214ENST00000491288 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-214ENST00000491288 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
DNMT3A-214ENST00000491288 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
DNMT3A-214ENST00000491288 NRKQ7Z2Y5 1582 aa18.78■□□□□ 0.6
DNMT3A-214ENST00000491288 POLR3GLQ9BT43 218 aa18.78■□□□□ 0.6
DNMT3A-214ENST00000491288 SLC12A5Q9H2X9 1139 aa18.78■□□□□ 0.6
DNMT3A-214ENST00000491288 CAMTA1Q9Y6Y1 1673 aa18.78■□□□□ 0.6
DNMT3A-214ENST00000491288 GCP02774 474 aa18.77■□□□□ 0.6
DNMT3A-214ENST00000491288 EN1Q05925 392 aaPredicted RBP18.77■□□□□ 0.6
DNMT3A-214ENST00000491288 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
DNMT3A-214ENST00000491288 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
DNMT3A-214ENST00000491288 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
DNMT3A-214ENST00000491288 LMO7Q8WWI1 1683 aa18.76■□□□□ 0.59
DNMT3A-214ENST00000491288 LARP1Q6PKG0 1096 aaKnown RBP18.75■□□□□ 0.59
DNMT3A-214ENST00000491288 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
DNMT3A-214ENST00000491288 NINLQ9Y2I6 1382 aa18.75■□□□□ 0.59
DNMT3A-214ENST00000491288 CAMKK2Q96RR4 588 aa18.74■□□□□ 0.59
DNMT3A-214ENST00000491288 THRAP3Q9Y2W1 955 aaKnown RBP18.74■□□□□ 0.59
DNMT3A-214ENST00000491288 LRP5O75197 1615 aa18.74■□□□□ 0.59
DNMT3A-214ENST00000491288 USP6P35125 1406 aa18.74■□□□□ 0.59
DNMT3A-214ENST00000491288 EVA1CP58658 441 aa18.73■□□□□ 0.59
DNMT3A-214ENST00000491288 TCP11L2Q8N4U5 519 aa18.73■□□□□ 0.59
DNMT3A-214ENST00000491288 RGPD1P0DJD0 1748 aa18.72■□□□□ 0.59
DNMT3A-214ENST00000491288 PARD3Q8TEW0 1356 aa18.71■□□□□ 0.59
DNMT3A-214ENST00000491288 PSDA5PKW4 1024 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-214ENST00000491288 NLRP6P59044 892 aa18.71■□□□□ 0.59
DNMT3A-214ENST00000491288 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-214ENST00000491288 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-214ENST00000491288 AATKQ6ZMQ8 1374 aa18.7■□□□□ 0.58
DNMT3A-214ENST00000491288 TRIM37O94972 964 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms