RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
LMNB2-203ENST00000490554 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
LMNB2-203ENST00000490554 NGDNQ8NEJ9 315 aaKnown RBP22.8■■□□□ 1.24
LMNB2-203ENST00000490554 COL14A1Q05707 1796 aaKnown RBP22.8■■□□□ 1.24
LMNB2-203ENST00000490554 SPATA31A5Q5VU36 1347 aa22.8■■□□□ 1.24
LMNB2-203ENST00000490554 SPATA31A7Q8IWB4 1347 aa22.8■■□□□ 1.24
LMNB2-203ENST00000490554 STAC3Q96MF2 364 aa22.79■■□□□ 1.24
LMNB2-203ENST00000490554 PAK3O75914 559 aaPredicted RBP22.77■■□□□ 1.24
LMNB2-203ENST00000490554 PRDM11Q9NQV5 511 aa22.76■■□□□ 1.23
LMNB2-203ENST00000490554 LRP5O75197 1615 aa22.75■■□□□ 1.23
LMNB2-203ENST00000490554 PSDA5PKW4 1024 aaPredicted RBP22.75■■□□□ 1.23
LMNB2-203ENST00000490554 FAM182BQ5T319 152 aa22.75■■□□□ 1.23
LMNB2-203ENST00000490554 EN1Q05925 392 aaPredicted RBP22.74■■□□□ 1.23
LMNB2-203ENST00000490554 CRYBG1Q9Y4K1 1723 aa22.74■■□□□ 1.23
LMNB2-203ENST00000490554 HRCP23327 699 aa22.73■■□□□ 1.23
LMNB2-203ENST00000490554 NUDT16Q96DE0 195 aaKnown RBP22.73■■□□□ 1.23
LMNB2-203ENST00000490554 ATP7BP35670 1465 aa22.73■■□□□ 1.23
LMNB2-203ENST00000490554 THSD7AQ9UPZ6 1657 aa22.71■■□□□ 1.23
LMNB2-203ENST00000490554 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
LMNB2-203ENST00000490554 KIAA0232Q92628 1395 aa22.71■■□□□ 1.23
LMNB2-203ENST00000490554 DISP2A7MBM2 1401 aa22.7■■□□□ 1.22
LMNB2-203ENST00000490554 CHRNA2Q15822 529 aa22.69■■□□□ 1.22
LMNB2-203ENST00000490554 RGPD1P0DJD0 1748 aa22.68■■□□□ 1.22
LMNB2-203ENST00000490554 CDK19Q9BWU1 502 aa22.67■■□□□ 1.22
LMNB2-203ENST00000490554 ARHGEF28Q8N1W1 1705 aaKnown RBP22.67■■□□□ 1.22
LMNB2-203ENST00000490554 ZC3H6P61129 1189 aaKnown RBP22.66■■□□□ 1.22
LMNB2-203ENST00000490554 STRN4Q9NRL3 753 aa22.66■■□□□ 1.22
LMNB2-203ENST00000490554 POLR3AO14802 1390 aaPredicted RBP22.65■■□□□ 1.22
LMNB2-203ENST00000490554 NUTM2GQ5VZR2 741 aa22.65■■□□□ 1.22
LMNB2-203ENST00000490554 ITSN1Q15811 1721 aa22.65■■□□□ 1.22
LMNB2-203ENST00000490554 R3HDM1Q15032 1099 aaKnown RBP22.64■■□□□ 1.21
LMNB2-203ENST00000490554 EZH2Q15910 746 aaKnown RBP22.64■■□□□ 1.21
LMNB2-203ENST00000490554 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.21
LMNB2-203ENST00000490554 FAM196AQ6ZSG2 479 aa22.64■■□□□ 1.21
LMNB2-203ENST00000490554 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.21
LMNB2-203ENST00000490554 ACEP12821 1306 aa22.63■■□□□ 1.21
LMNB2-203ENST00000490554 PLEKHG3A1L390 1219 aa22.63■■□□□ 1.21
LMNB2-203ENST00000490554 CAMKK2Q96RR4 588 aa22.63■■□□□ 1.21
LMNB2-203ENST00000490554 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
LMNB2-203ENST00000490554 TRIM37O94972 964 aa22.62■■□□□ 1.21
LMNB2-203ENST00000490554 TNS1Q9HBL0 1735 aaKnown RBP22.62■■□□□ 1.21
LMNB2-203ENST00000490554 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
LMNB2-203ENST00000490554 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
LMNB2-203ENST00000490554 SSH2Q76I76 1423 aa22.59■■□□□ 1.21
LMNB2-203ENST00000490554 EVA1CP58658 441 aa22.59■■□□□ 1.21
LMNB2-203ENST00000490554 TOPAZ1Q8N9V7 1692 aa22.58■■□□□ 1.21
LMNB2-203ENST00000490554 ABTB2Q8N961 1025 aa22.58■■□□□ 1.21
LMNB2-203ENST00000490554 USP19O94966 1318 aa22.57■■□□□ 1.2
LMNB2-203ENST00000490554 APBA3O96018 575 aa22.57■■□□□ 1.2
LMNB2-203ENST00000490554 CPDO75976 1380 aa22.57■■□□□ 1.2
LMNB2-203ENST00000490554 PARD3Q8TEW0 1356 aa22.57■■□□□ 1.2
LMNB2-203ENST00000490554 CAMTA1Q9Y6Y1 1673 aa22.56■■□□□ 1.2
LMNB2-203ENST00000490554 PDE3BQ13370 1112 aa22.56■■□□□ 1.2
LMNB2-203ENST00000490554 LARP1Q6PKG0 1096 aaKnown RBP22.56■■□□□ 1.2
LMNB2-203ENST00000490554 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
LMNB2-203ENST00000490554 TCP11L2Q8N4U5 519 aa22.55■■□□□ 1.2
LMNB2-203ENST00000490554 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
LMNB2-203ENST00000490554 NLRP13Q86W25 1043 aa22.53■■□□□ 1.2
LMNB2-203ENST00000490554 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
LMNB2-203ENST00000490554 KIAA1210Q9ULL0 1709 aa22.52■■□□□ 1.2
LMNB2-203ENST00000490554 GCP02774 474 aa22.52■■□□□ 1.2
LMNB2-203ENST00000490554 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
LMNB2-203ENST00000490554 SRPK2P78362 688 aaKnown RBP22.5■■□□□ 1.19
LMNB2-203ENST00000490554 PPIP5K1Q6PFW1 1433 aa22.49■■□□□ 1.19
LMNB2-203ENST00000490554 CENPJQ9HC77 1338 aaPredicted RBP22.49■■□□□ 1.19
LMNB2-203ENST00000490554 CABP2Q9NPB3 220 aa22.48■■□□□ 1.19
LMNB2-203ENST00000490554 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
LMNB2-203ENST00000490554 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
LMNB2-203ENST00000490554 NBPF14Q5TI25 921 aa22.46■■□□□ 1.19
LMNB2-203ENST00000490554 RREB1Q92766 1687 aa22.46■■□□□ 1.19
LMNB2-203ENST00000490554 C11orf95C9JLR9 678 aaPredicted RBP22.44■■□□□ 1.18
LMNB2-203ENST00000490554 CRB1P82279 1406 aa22.44■■□□□ 1.18
LMNB2-203ENST00000490554 USP6P35125 1406 aa22.43■■□□□ 1.18
LMNB2-203ENST00000490554 CABP1Q9NZU7 370 aa22.43■■□□□ 1.18
LMNB2-203ENST00000490554 AATKQ6ZMQ8 1374 aa22.42■■□□□ 1.18
LMNB2-203ENST00000490554 NLRP6P59044 892 aa22.42■■□□□ 1.18
LMNB2-203ENST00000490554 NUP188Q5SRE5 1749 aa22.42■■□□□ 1.18
LMNB2-203ENST00000490554 PARP4Q9UKK3 1724 aaKnown RBP22.41■■□□□ 1.18
LMNB2-203ENST00000490554 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.17
LMNB2-203ENST00000490554 SLIT3O75094 1523 aa22.39■■□□□ 1.17
LMNB2-203ENST00000490554 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.17
LMNB2-203ENST00000490554 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
LMNB2-203ENST00000490554 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
LMNB2-203ENST00000490554 DDB1Q16531 1140 aa22.36■■□□□ 1.17
LMNB2-203ENST00000490554 TOM1L2Q6ZVM7 507 aa22.36■■□□□ 1.17
LMNB2-203ENST00000490554 SPON1Q9HCB6 807 aa22.36■■□□□ 1.17
LMNB2-203ENST00000490554 PEAK1Q9H792 1746 aa22.36■■□□□ 1.17
LMNB2-203ENST00000490554 QRICH2Q9H0J4 1663 aa22.36■■□□□ 1.17
LMNB2-203ENST00000490554 PLSCR1O15162 318 aa22.35■■□□□ 1.17
LMNB2-203ENST00000490554 AXIN2Q9Y2T1 843 aa22.35■■□□□ 1.17
LMNB2-203ENST00000490554 KCNQ2O43526 872 aa22.34■■□□□ 1.17
LMNB2-203ENST00000490554 EVC2Q86UK5 1308 aa22.33■■□□□ 1.17
LMNB2-203ENST00000490554 WDR17Q8IZU2 1322 aa22.33■■□□□ 1.17
LMNB2-203ENST00000490554 LRRC37A3O60309 1634 aa22.33■■□□□ 1.17
LMNB2-203ENST00000490554 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.17
LMNB2-203ENST00000490554 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
LMNB2-203ENST00000490554 COL18A1P39060 1754 aa22.32■■□□□ 1.16
LMNB2-203ENST00000490554 PIK3C2AO00443 1686 aa22.31■■□□□ 1.16
LMNB2-203ENST00000490554 PTF1AQ7RTS3 328 aa22.31■■□□□ 1.16
LMNB2-203ENST00000490554 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms