RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 CFAP53Q96M91 514 aa12.67□□□□□ -0.38
USP34-218ENST00000490552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.66□□□□□ -0.38
USP34-218ENST00000490552 COG3Q96JB2 828 aa12.66□□□□□ -0.38
USP34-218ENST00000490552 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
USP34-218ENST00000490552 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
USP34-218ENST00000490552 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
USP34-218ENST00000490552 NRKQ7Z2Y5 1582 aa12.66□□□□□ -0.38
USP34-218ENST00000490552 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
USP34-218ENST00000490552 ESCO1Q5FWF5 840 aa12.65□□□□□ -0.38
USP34-218ENST00000490552 PMFBP1Q8TBY8 1022 aa12.65□□□□□ -0.38
USP34-218ENST00000490552 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
USP34-218ENST00000490552 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
USP34-218ENST00000490552 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP34-218ENST00000490552 LRRC7Q96NW7 1537 aa12.64□□□□□ -0.39
USP34-218ENST00000490552 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
USP34-218ENST00000490552 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
USP34-218ENST00000490552 C1orf167Q5SNV9 1468 aa12.64□□□□□ -0.39
USP34-218ENST00000490552 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
USP34-218ENST00000490552 MTHFSP49914 203 aa12.63□□□□□ -0.39
USP34-218ENST00000490552 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP34-218ENST00000490552 NME9Q86XW9 330 aa12.63□□□□□ -0.39
USP34-218ENST00000490552 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
USP34-218ENST00000490552 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
USP34-218ENST00000490552 MST1RQ04912 1400 aa12.62□□□□□ -0.39
USP34-218ENST00000490552 PSME1Q06323 249 aa12.61□□□□□ -0.39
USP34-218ENST00000490552 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
USP34-218ENST00000490552 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
USP34-218ENST00000490552 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
USP34-218ENST00000490552 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
USP34-218ENST00000490552 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
USP34-218ENST00000490552 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
USP34-218ENST00000490552 ORAI2Q96SN7 254 aa12.58□□□□□ -0.39
USP34-218ENST00000490552 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.39
USP34-218ENST00000490552 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
USP34-218ENST00000490552 ABTB2Q8N961 1025 aa12.58□□□□□ -0.4
USP34-218ENST00000490552 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
USP34-218ENST00000490552 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
USP34-218ENST00000490552 POLKQ9UBT6 870 aa12.57□□□□□ -0.4
USP34-218ENST00000490552 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
USP34-218ENST00000490552 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
USP34-218ENST00000490552 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
USP34-218ENST00000490552 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
USP34-218ENST00000490552 FOXO3O43524 673 aa12.56□□□□□ -0.4
USP34-218ENST00000490552 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
USP34-218ENST00000490552 NLRP6P59044 892 aa12.56□□□□□ -0.4
USP34-218ENST00000490552 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
USP34-218ENST00000490552 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
USP34-218ENST00000490552 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
USP34-218ENST00000490552 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
USP34-218ENST00000490552 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
USP34-218ENST00000490552 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
USP34-218ENST00000490552 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
USP34-218ENST00000490552 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
USP34-218ENST00000490552 COL3A1P02461 1466 aaPredicted RBP12.54□□□□□ -0.4
USP34-218ENST00000490552 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
USP34-218ENST00000490552 MAP2P11137 1827 aaKnown RBP12.53□□□□□ -0.4
USP34-218ENST00000490552 SHPRHQ149N8 1683 aa12.52□□□□□ -0.41
USP34-218ENST00000490552 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
USP34-218ENST00000490552 PDE3BQ13370 1112 aa12.52□□□□□ -0.41
USP34-218ENST00000490552 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
USP34-218ENST00000490552 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP34-218ENST00000490552 BRINP3Q76B58 766 aa12.51□□□□□ -0.41
USP34-218ENST00000490552 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
USP34-218ENST00000490552 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
USP34-218ENST00000490552 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
USP34-218ENST00000490552 FLT4P35916 1363 aa12.51□□□□□ -0.41
USP34-218ENST00000490552 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
USP34-218ENST00000490552 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
USP34-218ENST00000490552 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
USP34-218ENST00000490552 FCHSD2O94868 740 aa12.5□□□□□ -0.41
USP34-218ENST00000490552 RRS1Q15050 365 aaKnown RBP12.5□□□□□ -0.41
USP34-218ENST00000490552 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
USP34-218ENST00000490552 NEFMP07197 916 aa12.49□□□□□ -0.41
USP34-218ENST00000490552 TNS3Q68CZ2 1445 aa12.49□□□□□ -0.41
USP34-218ENST00000490552 IL13P35225 146 aa12.48□□□□□ -0.41
USP34-218ENST00000490552 AMPHP49418 695 aa12.48□□□□□ -0.41
USP34-218ENST00000490552 USP19O94966 1318 aa12.48□□□□□ -0.41
USP34-218ENST00000490552 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
USP34-218ENST00000490552 PXDNQ92626 1479 aa12.48□□□□□ -0.41
USP34-218ENST00000490552 SLIT3O75094 1523 aa12.48□□□□□ -0.41
USP34-218ENST00000490552 SOS2Q07890 1332 aaPredicted RBP12.48□□□□□ -0.41
USP34-218ENST00000490552 ALS2Q96Q42 1657 aa12.47□□□□□ -0.41
USP34-218ENST00000490552 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
USP34-218ENST00000490552 FBLN1P23142 703 aa12.47□□□□□ -0.41
USP34-218ENST00000490552 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
USP34-218ENST00000490552 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
USP34-218ENST00000490552 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
USP34-218ENST00000490552 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
USP34-218ENST00000490552 GCP02774 474 aa12.46□□□□□ -0.41
USP34-218ENST00000490552 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.41
USP34-218ENST00000490552 APAF1O14727 1248 aa12.46□□□□□ -0.42
USP34-218ENST00000490552 SOX12O15370 315 aa12.46□□□□□ -0.42
USP34-218ENST00000490552 NFAT5O94916 1531 aa12.46□□□□□ -0.42
USP34-218ENST00000490552 PHRF1Q9P1Y6 1649 aaKnown RBP12.45□□□□□ -0.42
USP34-218ENST00000490552 CCDC27Q2M243 656 aa12.45□□□□□ -0.42
USP34-218ENST00000490552 CCDC146Q8IYE0 955 aa12.45□□□□□ -0.42
USP34-218ENST00000490552 IQSEC2Q5JU85 1478 aa12.44□□□□□ -0.42
USP34-218ENST00000490552 HOXC9P31274 260 aa12.44□□□□□ -0.42
USP34-218ENST00000490552 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
USP34-218ENST00000490552 HSP90AB2PQ58FF8 381 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms