RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 SLIT2O94813 1529 aa12.98□□□□□ -0.33
SKAP2-207ENST00000490456 POTEMA6NI47 508 aa12.97□□□□□ -0.33
SKAP2-207ENST00000490456 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
SKAP2-207ENST00000490456 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
SKAP2-207ENST00000490456 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
SKAP2-207ENST00000490456 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
SKAP2-207ENST00000490456 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
SKAP2-207ENST00000490456 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
SKAP2-207ENST00000490456 USP32Q8NFA0 1604 aa12.95□□□□□ -0.34
SKAP2-207ENST00000490456 ROBO2Q9HCK4 1378 aa12.95□□□□□ -0.34
SKAP2-207ENST00000490456 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
SKAP2-207ENST00000490456 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
SKAP2-207ENST00000490456 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
SKAP2-207ENST00000490456 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
SKAP2-207ENST00000490456 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
SKAP2-207ENST00000490456 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
SKAP2-207ENST00000490456 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
SKAP2-207ENST00000490456 BAG6P46379 1132 aa12.92□□□□□ -0.34
SKAP2-207ENST00000490456 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
SKAP2-207ENST00000490456 SEPT12Q8IYM1 358 aa12.92□□□□□ -0.34
SKAP2-207ENST00000490456 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
SKAP2-207ENST00000490456 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
SKAP2-207ENST00000490456 FOXO3O43524 673 aa12.9□□□□□ -0.34
SKAP2-207ENST00000490456 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
SKAP2-207ENST00000490456 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
SKAP2-207ENST00000490456 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
SKAP2-207ENST00000490456 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
SKAP2-207ENST00000490456 VPS72Q15906 364 aa12.89□□□□□ -0.35
SKAP2-207ENST00000490456 PPLO60437 1756 aa12.89□□□□□ -0.35
SKAP2-207ENST00000490456 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
SKAP2-207ENST00000490456 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
SKAP2-207ENST00000490456 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
SKAP2-207ENST00000490456 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
SKAP2-207ENST00000490456 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
SKAP2-207ENST00000490456 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
SKAP2-207ENST00000490456 HAP1P54257 671 aaPredicted RBP12.86□□□□□ -0.35
SKAP2-207ENST00000490456 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
SKAP2-207ENST00000490456 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
SKAP2-207ENST00000490456 TNS1Q9HBL0 1735 aaKnown RBP12.85□□□□□ -0.35
SKAP2-207ENST00000490456 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
SKAP2-207ENST00000490456 RPGRIP1LQ68CZ1 1315 aa12.85□□□□□ -0.35
SKAP2-207ENST00000490456 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
SKAP2-207ENST00000490456 DISP2A7MBM2 1401 aa12.84□□□□□ -0.35
SKAP2-207ENST00000490456 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
SKAP2-207ENST00000490456 IFT172Q9UG01 1749 aa12.83□□□□□ -0.36
SKAP2-207ENST00000490456 ADGRB2O60241 1585 aa12.83□□□□□ -0.36
SKAP2-207ENST00000490456 A0A0G2JS52 829 aa12.83□□□□□ -0.36
SKAP2-207ENST00000490456 YY1P25490 414 aa12.83□□□□□ -0.36
SKAP2-207ENST00000490456 MYT1Q01538 1121 aa12.83□□□□□ -0.36
SKAP2-207ENST00000490456 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
SKAP2-207ENST00000490456 RGPD8O14715 1765 aaPredicted RBP12.82□□□□□ -0.36
SKAP2-207ENST00000490456 TECPR2O15040 1411 aa12.82□□□□□ -0.36
SKAP2-207ENST00000490456 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
SKAP2-207ENST00000490456 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
SKAP2-207ENST00000490456 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
SKAP2-207ENST00000490456 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
SKAP2-207ENST00000490456 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
SKAP2-207ENST00000490456 SPATA31E1Q6ZUB1 1445 aa12.8□□□□□ -0.36
SKAP2-207ENST00000490456 PSME1Q06323 249 aa12.8□□□□□ -0.36
SKAP2-207ENST00000490456 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
SKAP2-207ENST00000490456 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
SKAP2-207ENST00000490456 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
SKAP2-207ENST00000490456 MIER1Q8N108 512 aa12.79□□□□□ -0.36
SKAP2-207ENST00000490456 PROM2Q8N271 834 aa12.79□□□□□ -0.36
SKAP2-207ENST00000490456 KIF12Q96FN5 646 aa12.79□□□□□ -0.36
SKAP2-207ENST00000490456 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
SKAP2-207ENST00000490456 THSD7AQ9UPZ6 1657 aa12.78□□□□□ -0.36
SKAP2-207ENST00000490456 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
SKAP2-207ENST00000490456 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
SKAP2-207ENST00000490456 RREB1Q92766 1687 aa12.77□□□□□ -0.36
SKAP2-207ENST00000490456 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
SKAP2-207ENST00000490456 SIN3AQ96ST3 1273 aa12.77□□□□□ -0.37
SKAP2-207ENST00000490456 PARD3Q8TEW0 1356 aa12.77□□□□□ -0.37
SKAP2-207ENST00000490456 NRXN1Q9ULB1 1477 aa12.77□□□□□ -0.37
SKAP2-207ENST00000490456 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
SKAP2-207ENST00000490456 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
SKAP2-207ENST00000490456 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
SKAP2-207ENST00000490456 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
SKAP2-207ENST00000490456 FAM163AQ96GL9 167 aaPredicted RBP12.75□□□□□ -0.37
SKAP2-207ENST00000490456 STK26Q9P289 416 aa12.75□□□□□ -0.37
SKAP2-207ENST00000490456 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SKAP2-207ENST00000490456 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
SKAP2-207ENST00000490456 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
SKAP2-207ENST00000490456 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
SKAP2-207ENST00000490456 PLEKHH1Q9ULM0 1364 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 TIE1P35590 1138 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
SKAP2-207ENST00000490456 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
SKAP2-207ENST00000490456 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
SKAP2-207ENST00000490456 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
SKAP2-207ENST00000490456 SEC24BO95487 1268 aa12.72□□□□□ -0.37
SKAP2-207ENST00000490456 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
SKAP2-207ENST00000490456 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
SKAP2-207ENST00000490456 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
SKAP2-207ENST00000490456 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
SKAP2-207ENST00000490456 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms