RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 COL14A1Q05707 1796 aaKnown RBP23.23■■□□□ 1.31
PLOD3-216ENST00000489927 A0A0G2JS52 829 aa23.23■■□□□ 1.31
PLOD3-216ENST00000489927 MYT1Q01538 1121 aa23.23■■□□□ 1.31
PLOD3-216ENST00000489927 FAM98CQ17RN3 349 aaKnown RBP23.23■■□□□ 1.31
PLOD3-216ENST00000489927 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
PLOD3-216ENST00000489927 HRCP23327 699 aa23.22■■□□□ 1.31
PLOD3-216ENST00000489927 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
PLOD3-216ENST00000489927 ATP7BP35670 1465 aa23.21■■□□□ 1.31
PLOD3-216ENST00000489927 CRYBG1Q9Y4K1 1723 aa23.2■■□□□ 1.3
PLOD3-216ENST00000489927 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
PLOD3-216ENST00000489927 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
PLOD3-216ENST00000489927 SPATA31A5Q5VU36 1347 aa23.17■■□□□ 1.3
PLOD3-216ENST00000489927 SPATA31A7Q8IWB4 1347 aa23.17■■□□□ 1.3
PLOD3-216ENST00000489927 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
PLOD3-216ENST00000489927 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
PLOD3-216ENST00000489927 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
PLOD3-216ENST00000489927 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
PLOD3-216ENST00000489927 BAG6P46379 1132 aa23.12■■□□□ 1.29
PLOD3-216ENST00000489927 THSD7AQ9UPZ6 1657 aa23.12■■□□□ 1.29
PLOD3-216ENST00000489927 NUTM2GQ5VZR2 741 aa23.11■■□□□ 1.29
PLOD3-216ENST00000489927 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
PLOD3-216ENST00000489927 PHRF1Q9P1Y6 1649 aaKnown RBP23.11■■□□□ 1.29
PLOD3-216ENST00000489927 ACEP12821 1306 aa23.1■■□□□ 1.29
PLOD3-216ENST00000489927 CHRNA2Q15822 529 aa23.1■■□□□ 1.29
PLOD3-216ENST00000489927 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
PLOD3-216ENST00000489927 CCDC61Q9Y6R9 512 aa23.09■■□□□ 1.29
PLOD3-216ENST00000489927 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.29
PLOD3-216ENST00000489927 KIAA1210Q9ULL0 1709 aa23.08■■□□□ 1.29
PLOD3-216ENST00000489927 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.29
PLOD3-216ENST00000489927 NBPF8Q3BBV2 869 aa23.08■■□□□ 1.29
PLOD3-216ENST00000489927 NBPF1Q3BBV0 1214 aa23.07■■□□□ 1.28
PLOD3-216ENST00000489927 STRN4Q9NRL3 753 aa23.07■■□□□ 1.28
PLOD3-216ENST00000489927 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
PLOD3-216ENST00000489927 PLEKHG3A1L390 1219 aa23.06■■□□□ 1.28
PLOD3-216ENST00000489927 PSDA5PKW4 1024 aaPredicted RBP23.06■■□□□ 1.28
PLOD3-216ENST00000489927 EN1Q05925 392 aaPredicted RBP23.06■■□□□ 1.28
PLOD3-216ENST00000489927 LRP5O75197 1615 aa23.04■■□□□ 1.28
PLOD3-216ENST00000489927 ABTB2Q8N961 1025 aa23.03■■□□□ 1.28
PLOD3-216ENST00000489927 NRKQ7Z2Y5 1582 aa23.02■■□□□ 1.28
PLOD3-216ENST00000489927 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
PLOD3-216ENST00000489927 DISP2A7MBM2 1401 aa23.01■■□□□ 1.27
PLOD3-216ENST00000489927 TNS1Q9HBL0 1735 aaKnown RBP23.01■■□□□ 1.27
PLOD3-216ENST00000489927 SSH2Q76I76 1423 aa23■■□□□ 1.27
PLOD3-216ENST00000489927 SRPK2P78362 688 aaKnown RBP23■■□□□ 1.27
PLOD3-216ENST00000489927 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
PLOD3-216ENST00000489927 EVA1CP58658 441 aa22.99■■□□□ 1.27
PLOD3-216ENST00000489927 USP19O94966 1318 aa22.99■■□□□ 1.27
PLOD3-216ENST00000489927 CENPJQ9HC77 1338 aaPredicted RBP22.99■■□□□ 1.27
PLOD3-216ENST00000489927 CAMTA1Q9Y6Y1 1673 aa22.99■■□□□ 1.27
PLOD3-216ENST00000489927 FAM196AQ6ZSG2 479 aa22.98■■□□□ 1.27
PLOD3-216ENST00000489927 CABP2Q9NPB3 220 aa22.98■■□□□ 1.27
PLOD3-216ENST00000489927 CPDO75976 1380 aa22.98■■□□□ 1.27
PLOD3-216ENST00000489927 TRIM37O94972 964 aa22.97■■□□□ 1.27
PLOD3-216ENST00000489927 EZH2Q15910 746 aaKnown RBP22.97■■□□□ 1.27
PLOD3-216ENST00000489927 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
PLOD3-216ENST00000489927 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
PLOD3-216ENST00000489927 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
PLOD3-216ENST00000489927 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
PLOD3-216ENST00000489927 NLRP13Q86W25 1043 aa22.95■■□□□ 1.26
PLOD3-216ENST00000489927 GCP02774 474 aa22.94■■□□□ 1.26
PLOD3-216ENST00000489927 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
PLOD3-216ENST00000489927 PDE3BQ13370 1112 aa22.93■■□□□ 1.26
PLOD3-216ENST00000489927 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
PLOD3-216ENST00000489927 QRICH2Q9H0J4 1663 aa22.93■■□□□ 1.26
PLOD3-216ENST00000489927 APBA3O96018 575 aa22.91■■□□□ 1.26
PLOD3-216ENST00000489927 CABP1Q9NZU7 370 aa22.91■■□□□ 1.26
PLOD3-216ENST00000489927 COL5A2P05997 1499 aaPredicted RBP22.91■■□□□ 1.26
PLOD3-216ENST00000489927 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
PLOD3-216ENST00000489927 L3MBTL2Q969R5 705 aa22.9■■□□□ 1.26
PLOD3-216ENST00000489927 USP6P35125 1406 aa22.9■■□□□ 1.26
PLOD3-216ENST00000489927 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.25
PLOD3-216ENST00000489927 THRAP3Q9Y2W1 955 aaKnown RBP22.88■■□□□ 1.25
PLOD3-216ENST00000489927 NLRP6P59044 892 aa22.87■■□□□ 1.25
PLOD3-216ENST00000489927 ZBTB7CA1YPR0 619 aa22.86■■□□□ 1.25
PLOD3-216ENST00000489927 CRB1P82279 1406 aa22.85■■□□□ 1.25
PLOD3-216ENST00000489927 SLIT3O75094 1523 aa22.85■■□□□ 1.25
PLOD3-216ENST00000489927 PARP4Q9UKK3 1724 aaKnown RBP22.84■■□□□ 1.25
PLOD3-216ENST00000489927 SIN3AQ96ST3 1273 aa22.83■■□□□ 1.25
PLOD3-216ENST00000489927 AATKQ6ZMQ8 1374 aa22.83■■□□□ 1.25
PLOD3-216ENST00000489927 RREB1Q92766 1687 aa22.83■■□□□ 1.24
PLOD3-216ENST00000489927 EVC2Q86UK5 1308 aa22.82■■□□□ 1.24
PLOD3-216ENST00000489927 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
PLOD3-216ENST00000489927 PIK3C2AO00443 1686 aa22.82■■□□□ 1.24
PLOD3-216ENST00000489927 NUP188Q5SRE5 1749 aa22.8■■□□□ 1.24
PLOD3-216ENST00000489927 ROCK2O75116 1388 aaKnown RBP22.78■■□□□ 1.24
PLOD3-216ENST00000489927 TOM1L2Q6ZVM7 507 aa22.78■■□□□ 1.24
PLOD3-216ENST00000489927 AXIN2Q9Y2T1 843 aa22.78■■□□□ 1.24
PLOD3-216ENST00000489927 OVOS2A0A0G2JMS6 1433 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 OVOS2A0A0J9YW53 1432 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 OVOS2Q6IE36 1432 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 COL18A1P39060 1754 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 LRRC37A3O60309 1634 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 TTC21BQ7Z4L5 1316 aa22.77■■□□□ 1.24
PLOD3-216ENST00000489927 PEAK1Q9H792 1746 aa22.77■■□□□ 1.23
PLOD3-216ENST00000489927 C11orf95C9JLR9 678 aaPredicted RBP22.76■■□□□ 1.23
PLOD3-216ENST00000489927 NBPF14Q5TI25 921 aa22.76■■□□□ 1.23
PLOD3-216ENST00000489927 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
PLOD3-216ENST00000489927 DDB1Q16531 1140 aa22.75■■□□□ 1.23
PLOD3-216ENST00000489927 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms