RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TSKSQ9UJT2 592 aa13.75□□□□□ -0.21
TNRC6B-208ENST00000489500 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
TNRC6B-208ENST00000489500 OSBPP22059 807 aa13.74□□□□□ -0.21
TNRC6B-208ENST00000489500 BCAMP50895 628 aa13.74□□□□□ -0.21
TNRC6B-208ENST00000489500 ZFRQ96KR1 1074 aaKnown RBP13.74□□□□□ -0.21
TNRC6B-208ENST00000489500 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
TNRC6B-208ENST00000489500 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
TNRC6B-208ENST00000489500 CAMSAP1Q5T5Y3 1602 aa13.72□□□□□ -0.21
TNRC6B-208ENST00000489500 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
TNRC6B-208ENST00000489500 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
TNRC6B-208ENST00000489500 KDM5DQ9BY66 1539 aa13.72□□□□□ -0.21
TNRC6B-208ENST00000489500 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
TNRC6B-208ENST00000489500 NCOA1Q15788 1441 aa13.71□□□□□ -0.22
TNRC6B-208ENST00000489500 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
TNRC6B-208ENST00000489500 CDHR5Q9HBB8 845 aa13.7□□□□□ -0.22
TNRC6B-208ENST00000489500 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
TNRC6B-208ENST00000489500 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
TNRC6B-208ENST00000489500 EIF2AK4Q9P2K8 1649 aaKnown RBP13.69□□□□□ -0.22
TNRC6B-208ENST00000489500 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
TNRC6B-208ENST00000489500 ZC3H13Q5T200 1668 aaKnown RBP13.69□□□□□ -0.22
TNRC6B-208ENST00000489500 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
TNRC6B-208ENST00000489500 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
TNRC6B-208ENST00000489500 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
TNRC6B-208ENST00000489500 KCNV2Q8TDN2 545 aa13.68□□□□□ -0.22
TNRC6B-208ENST00000489500 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
TNRC6B-208ENST00000489500 PRSS12P56730 875 aa13.67□□□□□ -0.22
TNRC6B-208ENST00000489500 TNRQ92752 1358 aa13.67□□□□□ -0.22
TNRC6B-208ENST00000489500 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
TNRC6B-208ENST00000489500 PZPP20742 1482 aa13.67□□□□□ -0.22
TNRC6B-208ENST00000489500 DUOX2Q9NRD8 1548 aa13.66□□□□□ -0.22
TNRC6B-208ENST00000489500 PTPN23Q9H3S7 1636 aa13.66□□□□□ -0.22
TNRC6B-208ENST00000489500 C3orf80F5H4A9 247 aa13.66□□□□□ -0.22
TNRC6B-208ENST00000489500 RNF17Q9BXT8 1623 aaKnown RBP13.65□□□□□ -0.22
TNRC6B-208ENST00000489500 SMAPO00193 183 aa13.65□□□□□ -0.22
TNRC6B-208ENST00000489500 THEMISQ8N1K5 641 aaPredicted RBP13.65□□□□□ -0.22
TNRC6B-208ENST00000489500 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
TNRC6B-208ENST00000489500 IQSEC2Q5JU85 1478 aa13.64□□□□□ -0.23
TNRC6B-208ENST00000489500 ARHGEF1Q92888 912 aaKnown RBP13.64□□□□□ -0.23
TNRC6B-208ENST00000489500 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
TNRC6B-208ENST00000489500 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
TNRC6B-208ENST00000489500 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
TNRC6B-208ENST00000489500 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
TNRC6B-208ENST00000489500 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
TNRC6B-208ENST00000489500 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
TNRC6B-208ENST00000489500 KANK1Q14678 1352 aa13.62□□□□□ -0.23
TNRC6B-208ENST00000489500 MLLT3P42568 568 aaPredicted RBP13.62□□□□□ -0.23
TNRC6B-208ENST00000489500 ANKLE2Q86XL3 938 aa13.62□□□□□ -0.23
TNRC6B-208ENST00000489500 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
TNRC6B-208ENST00000489500 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
TNRC6B-208ENST00000489500 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
TNRC6B-208ENST00000489500 ANKRD30AQ9BXX3 1397 aa13.6□□□□□ -0.23
TNRC6B-208ENST00000489500 KIF15Q9NS87 1388 aa13.6□□□□□ -0.23
TNRC6B-208ENST00000489500 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
TNRC6B-208ENST00000489500 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.6□□□□□ -0.23
TNRC6B-208ENST00000489500 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
TNRC6B-208ENST00000489500 CEP152O94986 1710 aa13.59□□□□□ -0.23
TNRC6B-208ENST00000489500 DAPK1P53355 1430 aa13.59□□□□□ -0.23
TNRC6B-208ENST00000489500 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
TNRC6B-208ENST00000489500 LRCH3Q96II8 777 aa13.59□□□□□ -0.23
TNRC6B-208ENST00000489500 NPDC1Q9NQX5 325 aaPredicted RBP13.59□□□□□ -0.23
TNRC6B-208ENST00000489500 ABCC3O15438 1527 aa13.59□□□□□ -0.23
TNRC6B-208ENST00000489500 UGGT1Q9NYU2 1555 aa13.58□□□□□ -0.23
TNRC6B-208ENST00000489500 ABCC5O15440 1437 aa13.58□□□□□ -0.24
TNRC6B-208ENST00000489500 TATDN2Q93075 761 aa13.58□□□□□ -0.24
TNRC6B-208ENST00000489500 HPS5Q9UPZ3 1129 aa13.58□□□□□ -0.24
TNRC6B-208ENST00000489500 LTBP4Q8N2S1 1624 aa13.57□□□□□ -0.24
TNRC6B-208ENST00000489500 PNMA3Q9UL41 463 aa13.57□□□□□ -0.24
TNRC6B-208ENST00000489500 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
TNRC6B-208ENST00000489500 SPATA31D1Q6ZQQ2 1576 aa13.55□□□□□ -0.24
TNRC6B-208ENST00000489500 TSR3Q9UJK0 312 aaKnown RBP13.55□□□□□ -0.24
TNRC6B-208ENST00000489500 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
TNRC6B-208ENST00000489500 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 NUDT18Q6ZVK8 323 aa13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 SAMD7Q7Z3H4 446 aa13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 CHIC2Q9UKJ5 165 aa13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 ERVK-7P63135 1459 aa13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
TNRC6B-208ENST00000489500 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
TNRC6B-208ENST00000489500 NBPF26B4DH59 902 aa13.53□□□□□ -0.24
TNRC6B-208ENST00000489500 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
TNRC6B-208ENST00000489500 CPS1P31327 1500 aa13.53□□□□□ -0.24
TNRC6B-208ENST00000489500 MROH1Q8NDA8 1641 aa13.53□□□□□ -0.24
TNRC6B-208ENST00000489500 A0A0G2JS52 829 aa13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 UBAP1LF5GYI3 381 aa13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 ITGBL1O95965 494 aaPredicted RBP13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 NYAP1Q6ZVC0 841 aa13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 TTC13Q8NBP0 860 aa13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 RBM27Q9P2N5 1060 aaKnown RBP13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
TNRC6B-208ENST00000489500 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
TNRC6B-208ENST00000489500 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
TNRC6B-208ENST00000489500 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
TNRC6B-208ENST00000489500 TOM1O60784 492 aa13.5□□□□□ -0.25
TNRC6B-208ENST00000489500 NEURL4Q96JN8 1562 aa13.49□□□□□ -0.25
TNRC6B-208ENST00000489500 MED14O60244 1454 aa13.49□□□□□ -0.25
TNRC6B-208ENST00000489500 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
TNRC6B-208ENST00000489500 ADGRL2O95490 1459 aa13.48□□□□□ -0.25
TNRC6B-208ENST00000489500 PPP4CP60510 307 aa13.48□□□□□ -0.25
TNRC6B-208ENST00000489500 LMTK2Q8IWU2 1503 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms