RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 WASLO00401 505 aaPredicted RBP13.69□□□□□ -0.22
SNX17-207ENST00000489402 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
SNX17-207ENST00000489402 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
SNX17-207ENST00000489402 ARHGEF28Q8N1W1 1705 aaKnown RBP13.69□□□□□ -0.22
SNX17-207ENST00000489402 MSH5O43196 834 aa13.68□□□□□ -0.22
SNX17-207ENST00000489402 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
SNX17-207ENST00000489402 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
SNX17-207ENST00000489402 BTG4Q9NY30 223 aa13.67□□□□□ -0.22
SNX17-207ENST00000489402 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
SNX17-207ENST00000489402 HRCP23327 699 aa13.66□□□□□ -0.22
SNX17-207ENST00000489402 CRYBG1Q9Y4K1 1723 aa13.66□□□□□ -0.22
SNX17-207ENST00000489402 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
SNX17-207ENST00000489402 ATP7BP35670 1465 aa13.65□□□□□ -0.22
SNX17-207ENST00000489402 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
SNX17-207ENST00000489402 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
SNX17-207ENST00000489402 BAG6P46379 1132 aa13.63□□□□□ -0.23
SNX17-207ENST00000489402 NUDT16Q96DE0 195 aaKnown RBP13.63□□□□□ -0.23
SNX17-207ENST00000489402 KIAA1210Q9ULL0 1709 aa13.63□□□□□ -0.23
SNX17-207ENST00000489402 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
SNX17-207ENST00000489402 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
SNX17-207ENST00000489402 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
SNX17-207ENST00000489402 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
SNX17-207ENST00000489402 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
SNX17-207ENST00000489402 SPATA31A5Q5VU36 1347 aa13.61□□□□□ -0.23
SNX17-207ENST00000489402 SPATA31A7Q8IWB4 1347 aa13.61□□□□□ -0.23
SNX17-207ENST00000489402 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
SNX17-207ENST00000489402 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
SNX17-207ENST00000489402 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
SNX17-207ENST00000489402 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
SNX17-207ENST00000489402 KIAA0232Q92628 1395 aa13.58□□□□□ -0.23
SNX17-207ENST00000489402 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
SNX17-207ENST00000489402 ACEP12821 1306 aa13.58□□□□□ -0.24
SNX17-207ENST00000489402 LRP5O75197 1615 aa13.57□□□□□ -0.24
SNX17-207ENST00000489402 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
SNX17-207ENST00000489402 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
SNX17-207ENST00000489402 NBPF8Q3BBV2 869 aa13.56□□□□□ -0.24
SNX17-207ENST00000489402 SPATA31A1Q5TZJ5 1347 aa13.56□□□□□ -0.24
SNX17-207ENST00000489402 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
SNX17-207ENST00000489402 EVA1CP58658 441 aa13.55□□□□□ -0.24
SNX17-207ENST00000489402 ABTB2Q8N961 1025 aa13.55□□□□□ -0.24
SNX17-207ENST00000489402 TNS1Q9HBL0 1735 aaKnown RBP13.55□□□□□ -0.24
SNX17-207ENST00000489402 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
SNX17-207ENST00000489402 PSDA5PKW4 1024 aaPredicted RBP13.54□□□□□ -0.24
SNX17-207ENST00000489402 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
SNX17-207ENST00000489402 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
SNX17-207ENST00000489402 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
SNX17-207ENST00000489402 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
SNX17-207ENST00000489402 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
SNX17-207ENST00000489402 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
SNX17-207ENST00000489402 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
SNX17-207ENST00000489402 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
SNX17-207ENST00000489402 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
SNX17-207ENST00000489402 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
SNX17-207ENST00000489402 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
SNX17-207ENST00000489402 CPDO75976 1380 aa13.52□□□□□ -0.25
SNX17-207ENST00000489402 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
SNX17-207ENST00000489402 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
SNX17-207ENST00000489402 USP19O94966 1318 aa13.51□□□□□ -0.25
SNX17-207ENST00000489402 BARGINQ6ZT62 677 aa13.51□□□□□ -0.25
SNX17-207ENST00000489402 SIN3AQ96ST3 1273 aa13.51□□□□□ -0.25
SNX17-207ENST00000489402 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
SNX17-207ENST00000489402 TRIM37O94972 964 aa13.5□□□□□ -0.25
SNX17-207ENST00000489402 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
SNX17-207ENST00000489402 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
SNX17-207ENST00000489402 TCP11L2Q8N4U5 519 aa13.49□□□□□ -0.25
SNX17-207ENST00000489402 PARD3Q8TEW0 1356 aa13.48□□□□□ -0.25
SNX17-207ENST00000489402 GCP02774 474 aa13.48□□□□□ -0.25
SNX17-207ENST00000489402 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
SNX17-207ENST00000489402 EZH2Q15910 746 aaKnown RBP13.48□□□□□ -0.25
SNX17-207ENST00000489402 L3MBTL2Q969R5 705 aa13.48□□□□□ -0.25
SNX17-207ENST00000489402 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
SNX17-207ENST00000489402 APBA3O96018 575 aa13.47□□□□□ -0.25
SNX17-207ENST00000489402 COL5A2P05997 1499 aaPredicted RBP13.47□□□□□ -0.25
SNX17-207ENST00000489402 USP6P35125 1406 aa13.47□□□□□ -0.25
SNX17-207ENST00000489402 ZBTB7CA1YPR0 619 aa13.46□□□□□ -0.25
SNX17-207ENST00000489402 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
SNX17-207ENST00000489402 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
SNX17-207ENST00000489402 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.25
SNX17-207ENST00000489402 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.26
SNX17-207ENST00000489402 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
SNX17-207ENST00000489402 RREB1Q92766 1687 aa13.45□□□□□ -0.26
SNX17-207ENST00000489402 NLRP6P59044 892 aa13.45□□□□□ -0.26
SNX17-207ENST00000489402 CRB1P82279 1406 aa13.45□□□□□ -0.26
SNX17-207ENST00000489402 SLIT3O75094 1523 aa13.44□□□□□ -0.26
SNX17-207ENST00000489402 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
SNX17-207ENST00000489402 NUP188Q5SRE5 1749 aa13.43□□□□□ -0.26
SNX17-207ENST00000489402 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
SNX17-207ENST00000489402 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
SNX17-207ENST00000489402 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
SNX17-207ENST00000489402 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
SNX17-207ENST00000489402 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
SNX17-207ENST00000489402 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
SNX17-207ENST00000489402 OVOS2A0A0G2JMS6 1433 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 COL18A1P39060 1754 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
SNX17-207ENST00000489402 LRRC37A3O60309 1634 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms