RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RGPD1P0DJD0 1748 aa14.17□□□□□ -0.14
SSBP1-212ENST00000489378 ROCK1Q13464 1354 aa14.17□□□□□ -0.14
SSBP1-212ENST00000489378 NAIPQ13075 1403 aa14.16□□□□□ -0.14
SSBP1-212ENST00000489378 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
SSBP1-212ENST00000489378 FAM98CQ17RN3 349 aaKnown RBP14.15□□□□□ -0.14
SSBP1-212ENST00000489378 KIF1BO60333 1816 aa14.15□□□□□ -0.14
SSBP1-212ENST00000489378 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
SSBP1-212ENST00000489378 EZH2Q15910 746 aaKnown RBP14.15□□□□□ -0.14
SSBP1-212ENST00000489378 KRT28Q7Z3Y7 464 aa14.15□□□□□ -0.14
SSBP1-212ENST00000489378 TNS1Q9HBL0 1735 aaKnown RBP14.14□□□□□ -0.15
SSBP1-212ENST00000489378 CCDC144AA2RUR9 1427 aa14.14□□□□□ -0.15
SSBP1-212ENST00000489378 DISP2A7MBM2 1401 aa14.14□□□□□ -0.15
SSBP1-212ENST00000489378 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
SSBP1-212ENST00000489378 WAPLQ7Z5K2 1190 aa14.13□□□□□ -0.15
SSBP1-212ENST00000489378 ABCA3Q99758 1704 aa14.13□□□□□ -0.15
SSBP1-212ENST00000489378 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
SSBP1-212ENST00000489378 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
SSBP1-212ENST00000489378 NRAPQ86VF7 1730 aa14.11□□□□□ -0.15
SSBP1-212ENST00000489378 FMN2Q9NZ56 1722 aa14.11□□□□□ -0.15
SSBP1-212ENST00000489378 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
SSBP1-212ENST00000489378 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
SSBP1-212ENST00000489378 STK26Q9P289 416 aa14.09□□□□□ -0.15
SSBP1-212ENST00000489378 RGPD8O14715 1765 aaPredicted RBP14.08□□□□□ -0.16
SSBP1-212ENST00000489378 PPLO60437 1756 aa14.08□□□□□ -0.16
SSBP1-212ENST00000489378 ITGAEP38570 1179 aa14.07□□□□□ -0.16
SSBP1-212ENST00000489378 LMOD2Q6P5Q4 547 aa14.07□□□□□ -0.16
SSBP1-212ENST00000489378 PROM2Q8N271 834 aa14.07□□□□□ -0.16
SSBP1-212ENST00000489378 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
SSBP1-212ENST00000489378 TECPR2O15040 1411 aa14.07□□□□□ -0.16
SSBP1-212ENST00000489378 TRIM37O94972 964 aa14.07□□□□□ -0.16
SSBP1-212ENST00000489378 RPGRIP1LQ68CZ1 1315 aa14.06□□□□□ -0.16
SSBP1-212ENST00000489378 THSD7AQ9UPZ6 1657 aa14.06□□□□□ -0.16
SSBP1-212ENST00000489378 PSME1Q06323 249 aa14.06□□□□□ -0.16
SSBP1-212ENST00000489378 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
SSBP1-212ENST00000489378 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
SSBP1-212ENST00000489378 SPATA31A5Q5VU36 1347 aa14.05□□□□□ -0.16
SSBP1-212ENST00000489378 SPATA31A7Q8IWB4 1347 aa14.05□□□□□ -0.16
SSBP1-212ENST00000489378 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
SSBP1-212ENST00000489378 ARHGEF10O15013 1369 aa14.05□□□□□ -0.16
SSBP1-212ENST00000489378 CAMTA1Q9Y6Y1 1673 aa14.04□□□□□ -0.16
SSBP1-212ENST00000489378 APBA3O96018 575 aa14.04□□□□□ -0.16
SSBP1-212ENST00000489378 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
SSBP1-212ENST00000489378 PPP1R1BQ9UD71 204 aaPredicted RBP14.04□□□□□ -0.16
SSBP1-212ENST00000489378 NUP188Q5SRE5 1749 aa14.03□□□□□ -0.16
SSBP1-212ENST00000489378 RREB1Q92766 1687 aa14.03□□□□□ -0.16
SSBP1-212ENST00000489378 IFFO2Q5TF58 517 aa14.03□□□□□ -0.16
SSBP1-212ENST00000489378 ADGRF5Q8IZF2 1346 aa14.03□□□□□ -0.16
SSBP1-212ENST00000489378 COL14A1Q05707 1796 aaKnown RBP14.02□□□□□ -0.16
SSBP1-212ENST00000489378 PARD3Q8TEW0 1356 aa14.02□□□□□ -0.16
SSBP1-212ENST00000489378 ABCC11Q96J66 1382 aa14.02□□□□□ -0.16
SSBP1-212ENST00000489378 NINLQ9Y2I6 1382 aa14.02□□□□□ -0.16
SSBP1-212ENST00000489378 TMEM132EQ6IEE7 984 aa14.02□□□□□ -0.16
SSBP1-212ENST00000489378 IFT172Q9UG01 1749 aa14.02□□□□□ -0.17
SSBP1-212ENST00000489378 NRXN1Q9ULB1 1477 aa14.01□□□□□ -0.17
SSBP1-212ENST00000489378 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
SSBP1-212ENST00000489378 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
SSBP1-212ENST00000489378 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
SSBP1-212ENST00000489378 ZNF784Q8NCA9 323 aaPredicted RBP14.01□□□□□ -0.17
SSBP1-212ENST00000489378 SPON1Q9HCB6 807 aa14.01□□□□□ -0.17
SSBP1-212ENST00000489378 FAM196AQ6ZSG2 479 aa14□□□□□ -0.17
SSBP1-212ENST00000489378 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
SSBP1-212ENST00000489378 UTRNP46939 3433 aa14□□□□□ -0.17
SSBP1-212ENST00000489378 KCNQ2O43526 872 aa13.99□□□□□ -0.17
SSBP1-212ENST00000489378 NBPF8Q3BBV2 869 aa13.98□□□□□ -0.17
SSBP1-212ENST00000489378 NBPF14Q5TI25 921 aa13.98□□□□□ -0.17
SSBP1-212ENST00000489378 RRBP1Q9P2E9 1410 aaKnown RBP13.98□□□□□ -0.17
SSBP1-212ENST00000489378 CLCN6P51797 869 aa13.98□□□□□ -0.17
SSBP1-212ENST00000489378 PMFBP1Q8TBY8 1022 aa13.98□□□□□ -0.17
SSBP1-212ENST00000489378 TRPM3Q9HCF6 1732 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-212ENST00000489378 SPATA31A1Q5TZJ5 1347 aa13.97□□□□□ -0.17
SSBP1-212ENST00000489378 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.17
SSBP1-212ENST00000489378 ALS2Q96Q42 1657 aa13.96□□□□□ -0.18
SSBP1-212ENST00000489378 C1QTNF8P60827 252 aa13.94□□□□□ -0.18
SSBP1-212ENST00000489378 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
SSBP1-212ENST00000489378 PRDM11Q9NQV5 511 aa13.93□□□□□ -0.18
SSBP1-212ENST00000489378 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
SSBP1-212ENST00000489378 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
SSBP1-212ENST00000489378 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
SSBP1-212ENST00000489378 STRN4Q9NRL3 753 aa13.92□□□□□ -0.18
SSBP1-212ENST00000489378 NRKQ7Z2Y5 1582 aa13.92□□□□□ -0.18
SSBP1-212ENST00000489378 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
SSBP1-212ENST00000489378 PDE3BQ13370 1112 aa13.9□□□□□ -0.18
SSBP1-212ENST00000489378 CHRNA2Q15822 529 aa13.9□□□□□ -0.18
SSBP1-212ENST00000489378 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
SSBP1-212ENST00000489378 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.18
SSBP1-212ENST00000489378 KIAA0232Q92628 1395 aa13.9□□□□□ -0.18
SSBP1-212ENST00000489378 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.18
SSBP1-212ENST00000489378 PDGFDQ9GZP0 370 aaPredicted RBP13.9□□□□□ -0.19
SSBP1-212ENST00000489378 CASZ1Q86V15 1759 aa13.9□□□□□ -0.19
SSBP1-212ENST00000489378 MYOM1P52179 1685 aa13.89□□□□□ -0.19
SSBP1-212ENST00000489378 SPATA31E1Q6ZUB1 1445 aa13.89□□□□□ -0.19
SSBP1-212ENST00000489378 GPRASP1Q5JY77 1395 aa13.89□□□□□ -0.19
SSBP1-212ENST00000489378 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
SSBP1-212ENST00000489378 LHX8Q68G74 356 aa13.89□□□□□ -0.19
SSBP1-212ENST00000489378 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
SSBP1-212ENST00000489378 ANO8Q9HCE9 1232 aaPredicted RBP13.89□□□□□ -0.19
SSBP1-212ENST00000489378 CHD4Q14839 1912 aa13.88□□□□□ -0.19
SSBP1-212ENST00000489378 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
SSBP1-212ENST00000489378 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
SSBP1-212ENST00000489378 PTGER2P43116 358 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms