RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 F12P00748 615 aaPredicted RBP9.84□□□□□ -0.83
RAB4A-204ENST00000489342 TMEM259Q4ZIN3 620 aa9.84□□□□□ -0.83
RAB4A-204ENST00000489342 BAP1Q92560 729 aa9.84□□□□□ -0.83
RAB4A-204ENST00000489342 WNT7BP56706 349 aa9.83□□□□□ -0.84
RAB4A-204ENST00000489342 ARMC2Q8NEN0 867 aa9.83□□□□□ -0.84
RAB4A-204ENST00000489342 LRRN4Q8WUT4 740 aa9.83□□□□□ -0.84
RAB4A-204ENST00000489342 NRG2O14511 850 aaPredicted RBP9.82□□□□□ -0.84
RAB4A-204ENST00000489342 GDF9O60383 454 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 USP17L8P0C7I0 530 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 PRR20EP86478 221 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 PRR20CP86479 221 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 PRR20DP86480 221 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 PRR20BP86481 221 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 PRR20AP86496 221 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 MYO15BQ96JP2 1530 aa9.82□□□□□ -0.84
RAB4A-204ENST00000489342 AGERQ15109 404 aa9.81□□□□□ -0.84
RAB4A-204ENST00000489342 RC3H1Q5TC82 1133 aaKnown RBP9.81□□□□□ -0.84
RAB4A-204ENST00000489342 Q6ZNB5 142 aa9.81□□□□□ -0.84
RAB4A-204ENST00000489342 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
RAB4A-204ENST00000489342 CYP4X1Q8N118 509 aa9.81□□□□□ -0.84
RAB4A-204ENST00000489342 EHBP1Q8NDI1 1231 aa9.81□□□□□ -0.84
RAB4A-204ENST00000489342 TTC24A2A3L6 582 aaPredicted RBP9.8□□□□□ -0.84
RAB4A-204ENST00000489342 WNT7AO00755 349 aa9.8□□□□□ -0.84
RAB4A-204ENST00000489342 SH3BP2P78314 561 aa9.8□□□□□ -0.84
RAB4A-204ENST00000489342 SKOR1P84550 965 aa9.8□□□□□ -0.84
RAB4A-204ENST00000489342 ZNF511Q8NB15 262 aa9.8□□□□□ -0.84
RAB4A-204ENST00000489342 PKD2L1Q9P0L9 805 aa9.8□□□□□ -0.84
RAB4A-204ENST00000489342 NBPF14Q5TI25 921 aa9.79□□□□□ -0.84
RAB4A-204ENST00000489342 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
RAB4A-204ENST00000489342 NR6A1Q15406 480 aa9.78□□□□□ -0.84
RAB4A-204ENST00000489342 PNMA1Q8ND90 353 aa9.78□□□□□ -0.84
RAB4A-204ENST00000489342 FAM187AA6NFU0 413 aa9.77□□□□□ -0.85
RAB4A-204ENST00000489342 PKDCCQ504Y2 493 aa9.77□□□□□ -0.85
RAB4A-204ENST00000489342 BPHLQ86WA6 291 aaPredicted RBP9.75□□□□□ -0.85
RAB4A-204ENST00000489342 HMX1Q9NP08 348 aaPredicted RBP9.75□□□□□ -0.85
RAB4A-204ENST00000489342 BANK1Q8NDB2 785 aa9.74□□□□□ -0.85
RAB4A-204ENST00000489342 SNIP1Q8TAD8 396 aaKnown RBP9.74□□□□□ -0.85
RAB4A-204ENST00000489342 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.852e-6■■■■□ 21.7
RAB4A-204ENST00000489342 FKBPLQ9UIM3 349 aa9.74□□□□□ -0.85
RAB4A-204ENST00000489342 VARSP26640 1264 aaKnown RBP9.73□□□□□ -0.85
RAB4A-204ENST00000489342 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
RAB4A-204ENST00000489342 ZCCHC6Q5VYS8 1495 aaKnown RBP9.72□□□□□ -0.85
RAB4A-204ENST00000489342 SHROOM4Q9ULL8 1493 aa9.72□□□□□ -0.85
RAB4A-204ENST00000489342 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
RAB4A-204ENST00000489342 APBB1O00213 710 aa9.72□□□□□ -0.85
RAB4A-204ENST00000489342 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
RAB4A-204ENST00000489342 FAM174AQ8TBP5 190 aa9.72□□□□□ -0.85
RAB4A-204ENST00000489342 TOR4AQ9NXH8 423 aa9.72□□□□□ -0.85
RAB4A-204ENST00000489342 DGAT1O75907 488 aa9.71□□□□□ -0.86
RAB4A-204ENST00000489342 ALDH1A1P00352 501 aa9.71□□□□□ -0.86
RAB4A-204ENST00000489342 EPS8L1Q8TE68 723 aa9.71□□□□□ -0.86
RAB4A-204ENST00000489342 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
RAB4A-204ENST00000489342 WASF2Q9Y6W5 498 aa9.7□□□□□ -0.86
RAB4A-204ENST00000489342 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
RAB4A-204ENST00000489342 ARID5BQ14865 1188 aa9.69□□□□□ -0.86
RAB4A-204ENST00000489342 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
RAB4A-204ENST00000489342 ARHGAP9Q9BRR9 750 aa9.69□□□□□ -0.86
RAB4A-204ENST00000489342 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
RAB4A-204ENST00000489342 J3QL48 77 aa9.68□□□□□ -0.86
RAB4A-204ENST00000489342 PTK2Q05397 1052 aa9.68□□□□□ -0.86
RAB4A-204ENST00000489342 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
RAB4A-204ENST00000489342 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
RAB4A-204ENST00000489342 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
RAB4A-204ENST00000489342 SIAH2O43255 324 aa9.67□□□□□ -0.86
RAB4A-204ENST00000489342 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
RAB4A-204ENST00000489342 SH3BP5LQ7L8J4 393 aa9.67□□□□□ -0.86
RAB4A-204ENST00000489342 PRM3Q9NNZ6 103 aa9.67□□□□□ -0.86
RAB4A-204ENST00000489342 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
RAB4A-204ENST00000489342 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
RAB4A-204ENST00000489342 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
RAB4A-204ENST00000489342 SMPD1P17405 629 aa9.65□□□□□ -0.86
RAB4A-204ENST00000489342 MTMR14Q8NCE2 650 aa9.65□□□□□ -0.86
RAB4A-204ENST00000489342 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
RAB4A-204ENST00000489342 GJD4Q96KN9 370 aaPredicted RBP9.64□□□□□ -0.87
RAB4A-204ENST00000489342 DCAF1Q9Y4B6 1507 aa9.63□□□□□ -0.87
RAB4A-204ENST00000489342 SLC10A4Q96EP9 437 aa9.63□□□□□ -0.87
RAB4A-204ENST00000489342 GPSM3Q9Y4H4 160 aa9.63□□□□□ -0.87
RAB4A-204ENST00000489342 SOCS7O14512 581 aa9.62□□□□□ -0.87
RAB4A-204ENST00000489342 MYT1Q01538 1121 aa9.62□□□□□ -0.87
RAB4A-204ENST00000489342 ERFEQ4G0M1 354 aa9.62□□□□□ -0.87
RAB4A-204ENST00000489342 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
RAB4A-204ENST00000489342 MPNDQ8N594 471 aa9.62□□□□□ -0.87
RAB4A-204ENST00000489342 CUX2O14529 1486 aa9.61□□□□□ -0.87
RAB4A-204ENST00000489342 HPS1Q92902 700 aa9.61□□□□□ -0.87
RAB4A-204ENST00000489342 AXIN1O15169 862 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 ADH1CP00326 375 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 AVPP01185 164 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 NNTQ13423 1086 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 ADAM32Q8TC27 787 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 C1QTNF2Q9BXJ5 285 aa9.6□□□□□ -0.87
RAB4A-204ENST00000489342 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
RAB4A-204ENST00000489342 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
RAB4A-204ENST00000489342 TRMT44Q8IYL2 757 aaKnown RBP9.59□□□□□ -0.87
RAB4A-204ENST00000489342 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
RAB4A-204ENST00000489342 FSHRP23945 695 aa9.58□□□□□ -0.88
RAB4A-204ENST00000489342 NR5A1Q13285 461 aa9.58□□□□□ -0.88
RAB4A-204ENST00000489342 CDV3Q9UKY7 258 aaKnown RBP9.58□□□□□ -0.88
RAB4A-204ENST00000489342 AAASQ9NRG9 546 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms