RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC93-209ENST00000488908 ZSCAN1Q8NBB4 408 aa8.12□□□□□ -1.11
CCDC93-209ENST00000488908 SCARF1Q14162 830 aa8.11□□□□□ -1.11
CCDC93-209ENST00000488908 ADH1CP00326 375 aa8.1□□□□□ -1.11
CCDC93-209ENST00000488908 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
CCDC93-209ENST00000488908 CTHP32929 405 aa8.09□□□□□ -1.11
CCDC93-209ENST00000488908 GJA5P36382 358 aa8.09□□□□□ -1.11
CCDC93-209ENST00000488908 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
CCDC93-209ENST00000488908 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
CCDC93-209ENST00000488908 AMHR2Q16671 573 aa8.09□□□□□ -1.11
CCDC93-209ENST00000488908 GIGYF2Q6Y7W6 1299 aaKnown RBP8.09□□□□□ -1.11
CCDC93-209ENST00000488908 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
CCDC93-209ENST00000488908 TIMP2P16035 220 aa8.08□□□□□ -1.12
CCDC93-209ENST00000488908 BARGINQ6ZT62 677 aa8.08□□□□□ -1.12
CCDC93-209ENST00000488908 BEGAINQ9BUH8 593 aa8.08□□□□□ -1.12
CCDC93-209ENST00000488908 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
CCDC93-209ENST00000488908 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
CCDC93-209ENST00000488908 LYPD8Q6UX82 237 aa8.07□□□□□ -1.12
CCDC93-209ENST00000488908 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
CCDC93-209ENST00000488908 ZMYND10O75800 440 aa8.05□□□□□ -1.12
CCDC93-209ENST00000488908 RSBN1LQ6PCB5 846 aaPredicted RBP8.05□□□□□ -1.12
CCDC93-209ENST00000488908 CDK15Q96Q40 435 aa8.05□□□□□ -1.12
CCDC93-209ENST00000488908 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
CCDC93-209ENST00000488908 ARID5BQ14865 1188 aa8.04□□□□□ -1.12
CCDC93-209ENST00000488908 KLF16Q9BXK1 252 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-209ENST00000488908 ZBTB3Q9H5J0 574 aa8.04□□□□□ -1.12
CCDC93-209ENST00000488908 CFAP99D6REC4 459 aa8.03□□□□□ -1.12
CCDC93-209ENST00000488908 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
CCDC93-209ENST00000488908 MAP10Q9P2G4 905 aa8.03□□□□□ -1.12
CCDC93-209ENST00000488908 SOBPA7XYQ1 873 aa8.02□□□□□ -1.13
CCDC93-209ENST00000488908 ZIC2O95409 532 aaPredicted RBP8.02□□□□□ -1.13
CCDC93-209ENST00000488908 F12P00748 615 aaPredicted RBP8.02□□□□□ -1.13
CCDC93-209ENST00000488908 VSIG8P0DPA2 414 aa8.02□□□□□ -1.13
CCDC93-209ENST00000488908 NR5A1Q13285 461 aa8.02□□□□□ -1.13
CCDC93-209ENST00000488908 AGERQ15109 404 aa8.02□□□□□ -1.13
CCDC93-209ENST00000488908 PCDHB15Q9Y5E8 787 aa8.02□□□□□ -1.13
CCDC93-209ENST00000488908 SPTLC1O15269 473 aa8.01□□□□□ -1.13
CCDC93-209ENST00000488908 MAN1A2O60476 641 aa8.01□□□□□ -1.13
CCDC93-209ENST00000488908 HRCP23327 699 aa8.01□□□□□ -1.13
CCDC93-209ENST00000488908 PRPF38BQ5VTL8 546 aaKnown RBP8.01□□□□□ -1.13
CCDC93-209ENST00000488908 BPHLQ86WA6 291 aaPredicted RBP8.01□□□□□ -1.13
CCDC93-209ENST00000488908 UPP2O95045 317 aa8□□□□□ -1.13
CCDC93-209ENST00000488908 ZC3H15Q8WU90 426 aaKnown RBP8□□□□□ -1.13
CCDC93-209ENST00000488908 ITPKCQ96DU7 683 aa8□□□□□ -1.13
CCDC93-209ENST00000488908 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
CCDC93-209ENST00000488908 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
CCDC93-209ENST00000488908 RIC3Q7Z5B4 369 aa7.99□□□□□ -1.13
CCDC93-209ENST00000488908 PARP9Q8IXQ6 854 aa7.99□□□□□ -1.13
CCDC93-209ENST00000488908 NR3C2P08235 984 aa7.98□□□□□ -1.13
CCDC93-209ENST00000488908 BMP2P12643 396 aa7.97□□□□□ -1.13
CCDC93-209ENST00000488908 GRM5P41594 1212 aa7.97□□□□□ -1.13
CCDC93-209ENST00000488908 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
CCDC93-209ENST00000488908 ARMC2Q8NEN0 867 aa7.97□□□□□ -1.13
CCDC93-209ENST00000488908 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
CCDC93-209ENST00000488908 TSC1Q92574 1164 aa7.97□□□□□ -1.13
CCDC93-209ENST00000488908 CSPP1Q1MSJ5 1256 aa7.96□□□□□ -1.14
CCDC93-209ENST00000488908 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
CCDC93-209ENST00000488908 MEIOBQ8N635 442 aa7.96□□□□□ -1.14
CCDC93-209ENST00000488908 TRIM66O15016 1216 aa7.95□□□□□ -1.14
CCDC93-209ENST00000488908 PER1O15534 1290 aaPredicted RBP7.95□□□□□ -1.14
CCDC93-209ENST00000488908 NUTM2BA6NNL0 878 aaPredicted RBP7.94□□□□□ -1.14
CCDC93-209ENST00000488908 NUTM2EB1AL46 878 aaPredicted RBP7.94□□□□□ -1.14
CCDC93-209ENST00000488908 PPFIA3O75145 1194 aa7.94□□□□□ -1.14
CCDC93-209ENST00000488908 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
CCDC93-209ENST00000488908 NUTM2DQ5VT03 806 aaPredicted RBP7.94□□□□□ -1.14
CCDC93-209ENST00000488908 NUTM2AQ8IVF1 878 aaPredicted RBP7.94□□□□□ -1.14
CCDC93-209ENST00000488908 FSHRP23945 695 aa7.93□□□□□ -1.14
CCDC93-209ENST00000488908 C1QTNF2Q9BXJ5 285 aa7.93□□□□□ -1.14
CCDC93-209ENST00000488908 MAP4K5Q9Y4K4 846 aa7.93□□□□□ -1.14
CCDC93-209ENST00000488908 VASH1Q7L8A9 365 aaPredicted RBP7.92□□□□□ -1.14
CCDC93-209ENST00000488908 SH3RF1Q7Z6J0 888 aa7.92□□□□□ -1.14
CCDC93-209ENST00000488908 HELBQ8NG08 1087 aaPredicted RBP7.92□□□□□ -1.14
CCDC93-209ENST00000488908 AK7Q96M32 723 aa7.92□□□□□ -1.14
CCDC93-209ENST00000488908 TSEN34Q9BSV6 310 aaKnown RBP7.92□□□□□ -1.14
CCDC93-209ENST00000488908 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
CCDC93-209ENST00000488908 SOS2Q07890 1332 aaPredicted RBP7.92□□□□□ -1.14
CCDC93-209ENST00000488908 QPCTQ16769 361 aa7.91□□□□□ -1.14
CCDC93-209ENST00000488908 TUSC1Q2TAM9 212 aa7.91□□□□□ -1.14
CCDC93-209ENST00000488908 MYSM1Q5VVJ2 828 aa7.91□□□□□ -1.14
CCDC93-209ENST00000488908 TRMT44Q8IYL2 757 aaKnown RBP7.91□□□□□ -1.14
CCDC93-209ENST00000488908 LIMD1Q9UGP4 676 aa7.91□□□□□ -1.14
CCDC93-209ENST00000488908 DNMT3LQ9UJW3 386 aa7.91□□□□□ -1.14
CCDC93-209ENST00000488908 MAGEB6P1A0A0J9YX57 407 aa7.9□□□□□ -1.14
CCDC93-209ENST00000488908 CCDC116Q8IYX3 515 aa7.9□□□□□ -1.14
CCDC93-209ENST00000488908 LILRB3O75022 631 aa7.89□□□□□ -1.15
CCDC93-209ENST00000488908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.89□□□□□ -1.15
CCDC93-209ENST00000488908 SH3BP5LQ7L8J4 393 aa7.89□□□□□ -1.15
CCDC93-209ENST00000488908 TTLL8A6PVC2 850 aa7.88□□□□□ -1.15
CCDC93-209ENST00000488908 KCNMA1Q12791 1236 aa7.88□□□□□ -1.15
CCDC93-209ENST00000488908 GPKOWQ92917 476 aaPredicted RBP eCLIP7.88□□□□□ -1.15
CCDC93-209ENST00000488908 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
CCDC93-209ENST00000488908 PGPEP1Q9NXJ5 209 aa7.86□□□□□ -1.15
CCDC93-209ENST00000488908 PTSQ03393 145 aa7.85□□□□□ -1.15
CCDC93-209ENST00000488908 PDE4DQ08499 809 aa7.85□□□□□ -1.15
CCDC93-209ENST00000488908 CLK2P49760 499 aaKnown RBP7.84□□□□□ -1.15
CCDC93-209ENST00000488908 ERFEQ4G0M1 354 aa7.84□□□□□ -1.15
CCDC93-209ENST00000488908 RTL5Q5HYW3 569 aaPredicted RBP7.84□□□□□ -1.15
CCDC93-209ENST00000488908 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
CCDC93-209ENST00000488908 CNTNAP3BQ96NU0 1288 aa7.84□□□□□ -1.15
CCDC93-209ENST00000488908 CNTNAP3Q9BZ76 1288 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms