RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 COL14A1Q05707 1796 aaKnown RBP37.68■■■■□ 3.62
RNF220-216ENST00000488865 NRAPQ86VF7 1730 aa37.67■■■■□ 3.62
RNF220-216ENST00000488865 BTG4Q9NY30 223 aa37.66■■■■□ 3.62
RNF220-216ENST00000488865 CRYBG1Q9Y4K1 1723 aa37.65■■■■□ 3.62
RNF220-216ENST00000488865 BLMP54132 1417 aaPredicted RBP37.65■■■■□ 3.62
RNF220-216ENST00000488865 NBPF1Q3BBV0 1214 aa37.63■■■■□ 3.61
RNF220-216ENST00000488865 CCDC61Q9Y6R9 512 aa37.62■■■■□ 3.61
RNF220-216ENST00000488865 POLR3AO14802 1390 aaPredicted RBP37.61■■■■□ 3.61
RNF220-216ENST00000488865 ZRANB1Q9UGI0 708 aa37.61■■■■□ 3.61
RNF220-216ENST00000488865 TOPAZ1Q8N9V7 1692 aa37.6■■■■□ 3.61
RNF220-216ENST00000488865 KRT27Q7Z3Y8 459 aa37.59■■■■□ 3.61
RNF220-216ENST00000488865 PLEKHG3A1L390 1219 aa37.58■■■■□ 3.61
RNF220-216ENST00000488865 SRCAPQ6ZRS2 3230 aa37.57■■■■□ 3.6
RNF220-216ENST00000488865 ACEP12821 1306 aa37.57■■■■□ 3.6
RNF220-216ENST00000488865 PRDM11Q9NQV5 511 aa37.56■■■■□ 3.6
RNF220-216ENST00000488865 NBPF8Q3BBV2 869 aa37.55■■■■□ 3.6
RNF220-216ENST00000488865 FAM98CQ17RN3 349 aaKnown RBP37.54■■■■□ 3.6
RNF220-216ENST00000488865 SF3B2Q13435 895 aaKnown RBP37.52■■■■□ 3.6
RNF220-216ENST00000488865 SPATA31A5Q5VU36 1347 aa37.52■■■■□ 3.6
RNF220-216ENST00000488865 SPATA31A7Q8IWB4 1347 aa37.52■■■■□ 3.6
RNF220-216ENST00000488865 CENPJQ9HC77 1338 aaPredicted RBP37.52■■■■□ 3.6
RNF220-216ENST00000488865 A0A0G2JS52 829 aa37.51■■■■□ 3.6
RNF220-216ENST00000488865 MYT1Q01538 1121 aa37.51■■■■□ 3.6
RNF220-216ENST00000488865 KIAA0232Q92628 1395 aa37.5■■■■□ 3.59
RNF220-216ENST00000488865 PHRF1Q9P1Y6 1649 aaKnown RBP37.5■■■■□ 3.59
RNF220-216ENST00000488865 L3MBTL2Q969R5 705 aa37.47■■■■□ 3.59
RNF220-216ENST00000488865 SRPK2P78362 688 aaKnown RBP37.46■■■■□ 3.59
RNF220-216ENST00000488865 DEFB132Q7Z7B7 95 aa37.46■■■■□ 3.59
RNF220-216ENST00000488865 NUTM2GQ5VZR2 741 aa37.45■■■■□ 3.59
RNF220-216ENST00000488865 PPIP5K1Q6PFW1 1433 aa37.43■■■■□ 3.58
RNF220-216ENST00000488865 ZC3H6P61129 1189 aaKnown RBP37.42■■■■□ 3.58
RNF220-216ENST00000488865 CHRNA2Q15822 529 aa37.42■■■■□ 3.58
RNF220-216ENST00000488865 ABTB2Q8N961 1025 aa37.42■■■■□ 3.58
RNF220-216ENST00000488865 QRICH2Q9H0J4 1663 aa37.41■■■■□ 3.58
RNF220-216ENST00000488865 CABP2Q9NPB3 220 aa37.4■■■■□ 3.58
RNF220-216ENST00000488865 THSD7AQ9UPZ6 1657 aa37.4■■■■□ 3.58
RNF220-216ENST00000488865 SPATA31A1Q5TZJ5 1347 aa37.39■■■■□ 3.58
RNF220-216ENST00000488865 SIN3AQ96ST3 1273 aa37.38■■■■□ 3.57
RNF220-216ENST00000488865 BRD4O60885 1362 aaPredicted RBP37.38■■■■□ 3.57
RNF220-216ENST00000488865 USP19O94966 1318 aa37.36■■■■□ 3.57
RNF220-216ENST00000488865 NRKQ7Z2Y5 1582 aa37.36■■■■□ 3.57
RNF220-216ENST00000488865 STRN4Q9NRL3 753 aa37.35■■■■□ 3.57
RNF220-216ENST00000488865 CPDO75976 1380 aa37.34■■■■□ 3.57
RNF220-216ENST00000488865 NLRP13Q86W25 1043 aa37.34■■■■□ 3.57
RNF220-216ENST00000488865 TRPM1Q7Z4N2 1603 aa37.34■■■■□ 3.57
RNF220-216ENST00000488865 BAG6P46379 1132 aa37.33■■■■□ 3.57
RNF220-216ENST00000488865 EVA1CP58658 441 aa37.3■■■■□ 3.56
RNF220-216ENST00000488865 CABP1Q9NZU7 370 aa37.3■■■■□ 3.56
RNF220-216ENST00000488865 NEUROD1Q13562 356 aa37.29■■■■□ 3.56
RNF220-216ENST00000488865 EVC2Q86UK5 1308 aa37.29■■■■□ 3.56
RNF220-216ENST00000488865 SSH2Q76I76 1423 aa37.28■■■■□ 3.56
RNF220-216ENST00000488865 GCP02774 474 aa37.28■■■■□ 3.56
RNF220-216ENST00000488865 CAMTA1Q9Y6Y1 1673 aa37.28■■■■□ 3.56
RNF220-216ENST00000488865 RGPD1P0DJD0 1748 aa37.27■■■■□ 3.56
RNF220-216ENST00000488865 FAM182BQ5T319 152 aa37.27■■■■□ 3.56
RNF220-216ENST00000488865 LMO7Q8WWI1 1683 aa37.27■■■■□ 3.56
RNF220-216ENST00000488865 USP6P35125 1406 aa37.27■■■■□ 3.56
RNF220-216ENST00000488865 ROCK2O75116 1388 aaKnown RBP37.26■■■■□ 3.55
RNF220-216ENST00000488865 BARGINQ6ZT62 677 aa37.25■■■■□ 3.55
RNF220-216ENST00000488865 USP35Q9P2H5 1018 aa37.22■■■■□ 3.55
RNF220-216ENST00000488865 LARP1Q6PKG0 1096 aaKnown RBP37.21■■■■□ 3.55
RNF220-216ENST00000488865 FAM196AQ6ZSG2 479 aa37.2■■■■□ 3.55
RNF220-216ENST00000488865 DISP2A7MBM2 1401 aa37.19■■■■□ 3.54
RNF220-216ENST00000488865 NLRP6P59044 892 aa37.18■■■■□ 3.54
RNF220-216ENST00000488865 TCP11L2Q8N4U5 519 aa37.18■■■■□ 3.54
RNF220-216ENST00000488865 EN1Q05925 392 aaPredicted RBP37.17■■■■□ 3.54
RNF220-216ENST00000488865 THRAP3Q9Y2W1 955 aaKnown RBP37.17■■■■□ 3.54
RNF220-216ENST00000488865 SLIT3O75094 1523 aa37.15■■■■□ 3.54
RNF220-216ENST00000488865 ZNF692Q9BU19 519 aaPredicted RBP37.15■■■■□ 3.54
RNF220-216ENST00000488865 TNS1Q9HBL0 1735 aaKnown RBP37.15■■■■□ 3.54
RNF220-216ENST00000488865 COL5A2P05997 1499 aaPredicted RBP37.14■■■■□ 3.54
RNF220-216ENST00000488865 PDE3BQ13370 1112 aa37.13■■■■□ 3.53
RNF220-216ENST00000488865 AATKQ6ZMQ8 1374 aa37.12■■■■□ 3.53
RNF220-216ENST00000488865 PIK3C2AO00443 1686 aa37.11■■■■□ 3.53
RNF220-216ENST00000488865 TRIM37O94972 964 aa37.1■■■■□ 3.53
RNF220-216ENST00000488865 AKAP12Q02952 1782 aa37.07■■■■□ 3.53
RNF220-216ENST00000488865 CRB1P82279 1406 aa37.07■■■■□ 3.52
RNF220-216ENST00000488865 TTC21BQ7Z4L5 1316 aa37.07■■■■□ 3.52
RNF220-216ENST00000488865 SBNO2Q9Y2G9 1366 aa37.05■■■■□ 3.52
RNF220-216ENST00000488865 ZBTB7CA1YPR0 619 aa37.05■■■■□ 3.52
RNF220-216ENST00000488865 PSDA5PKW4 1024 aaPredicted RBP37.05■■■■□ 3.52
RNF220-216ENST00000488865 LRP5O75197 1615 aa37.05■■■■□ 3.52
RNF220-216ENST00000488865 CPSF1Q10570 1443 aaKnown RBP37.04■■■■□ 3.52
RNF220-216ENST00000488865 TTC21AQ8NDW8 1320 aa37.04■■■■□ 3.52
RNF220-216ENST00000488865 PARP4Q9UKK3 1724 aaKnown RBP37.03■■■■□ 3.52
RNF220-216ENST00000488865 EZH2Q15910 746 aaKnown RBP37.03■■■■□ 3.52
RNF220-216ENST00000488865 CAMKK2Q96RR4 588 aa37.03■■■■□ 3.52
RNF220-216ENST00000488865 PARD3Q8TEW0 1356 aa37.02■■■■□ 3.52
RNF220-216ENST00000488865 COL18A1P39060 1754 aa37.01■■■■□ 3.52
RNF220-216ENST00000488865 KCNH5Q8NCM2 988 aa37.01■■■■□ 3.52
RNF220-216ENST00000488865 APBA3O96018 575 aa37■■■■□ 3.51
RNF220-216ENST00000488865 C11orf95C9JLR9 678 aaPredicted RBP36.99■■■■□ 3.51
RNF220-216ENST00000488865 CARD11Q9BXL7 1154 aa36.99■■■■□ 3.51
RNF220-216ENST00000488865 ARHGEF25Q86VW2 580 aa36.98■■■■□ 3.51
RNF220-216ENST00000488865 KTN1Q86UP2 1357 aaKnown RBP36.98■■■■□ 3.51
RNF220-216ENST00000488865 TOM1L2Q6ZVM7 507 aa36.95■■■■□ 3.51
RNF220-216ENST00000488865 AXIN2Q9Y2T1 843 aa36.95■■■■□ 3.51
RNF220-216ENST00000488865 TONSLQ96HA7 1378 aa36.94■■■■□ 3.5
RNF220-216ENST00000488865 WDR17Q8IZU2 1322 aa36.94■■■■□ 3.5
RNF220-216ENST00000488865 R3HDM1Q15032 1099 aaKnown RBP36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms