RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 USP21Q9UK80 565 aa31.77■■■□□ 2.68
VAMP2-204ENST00000488857 BCL9LQ86UU0 1499 aa31.77■■■□□ 2.68
VAMP2-204ENST00000488857 SLIT2O94813 1529 aa31.75■■■□□ 2.67
VAMP2-204ENST00000488857 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.75■■■□□ 2.67
VAMP2-204ENST00000488857 PAK3O75914 559 aaPredicted RBP31.75■■■□□ 2.67
VAMP2-204ENST00000488857 BRD4O60885 1362 aaPredicted RBP31.74■■■□□ 2.67
VAMP2-204ENST00000488857 HAP1P54257 671 aaPredicted RBP31.74■■■□□ 2.67
VAMP2-204ENST00000488857 CABP1Q9NZU7 370 aa31.73■■■□□ 2.67
VAMP2-204ENST00000488857 ATRNO75882 1429 aa31.73■■■□□ 2.67
VAMP2-204ENST00000488857 RBM6P78332 1123 aaKnown RBP31.72■■■□□ 2.67
VAMP2-204ENST00000488857 ATAD2Q6PL18 1390 aa31.71■■■□□ 2.67
VAMP2-204ENST00000488857 TRPC5Q9UL62 973 aaPredicted RBP31.71■■■□□ 2.67
VAMP2-204ENST00000488857 NWD2Q9ULI1 1742 aa31.7■■■□□ 2.67
VAMP2-204ENST00000488857 PLCH1Q4KWH8 1693 aa31.69■■■□□ 2.66
VAMP2-204ENST00000488857 USP6P35125 1406 aa31.67■■■□□ 2.66
VAMP2-204ENST00000488857 PHRF1Q9P1Y6 1649 aaKnown RBP31.67■■■□□ 2.66
VAMP2-204ENST00000488857 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
VAMP2-204ENST00000488857 AKAP12Q02952 1782 aa31.66■■■□□ 2.66
VAMP2-204ENST00000488857 PLEKHG5O94827 1062 aa31.65■■■□□ 2.66
VAMP2-204ENST00000488857 UNC5CLQ8IV45 518 aa31.65■■■□□ 2.66
VAMP2-204ENST00000488857 SSH2Q76I76 1423 aa31.65■■■□□ 2.66
VAMP2-204ENST00000488857 PUS7Q96PZ0 661 aaKnown RBP31.63■■■□□ 2.65
VAMP2-204ENST00000488857 TESK2Q96S53 571 aa31.63■■■□□ 2.65
VAMP2-204ENST00000488857 RGS12O14924 1447 aa31.63■■■□□ 2.65
VAMP2-204ENST00000488857 COL14A1Q05707 1796 aaKnown RBP31.63■■■□□ 2.65
VAMP2-204ENST00000488857 ST20-MTHFSA0A0A6YYL1 179 aa31.62■■■□□ 2.65
VAMP2-204ENST00000488857 FAM83GA6ND36 823 aa31.62■■■□□ 2.65
VAMP2-204ENST00000488857 CPSF1Q10570 1443 aaKnown RBP31.61■■■□□ 2.65
VAMP2-204ENST00000488857 SLC24A1O60721 1099 aa31.61■■■□□ 2.65
VAMP2-204ENST00000488857 ABTB2Q8N961 1025 aa31.61■■■□□ 2.65
VAMP2-204ENST00000488857 ZNF692Q9BU19 519 aaPredicted RBP31.61■■■□□ 2.65
VAMP2-204ENST00000488857 USP47Q96K76 1375 aa31.59■■■□□ 2.65
VAMP2-204ENST00000488857 USP19O94966 1318 aa31.59■■■□□ 2.65
VAMP2-204ENST00000488857 NRAPQ86VF7 1730 aa31.58■■■□□ 2.65
VAMP2-204ENST00000488857 NRKQ7Z2Y5 1582 aa31.57■■■□□ 2.64
VAMP2-204ENST00000488857 NUTM2GQ5VZR2 741 aa31.57■■■□□ 2.64
VAMP2-204ENST00000488857 GJD4Q96KN9 370 aaPredicted RBP31.57■■■□□ 2.64
VAMP2-204ENST00000488857 MON2Q7Z3U7 1717 aa31.56■■■□□ 2.64
VAMP2-204ENST00000488857 PIK3C2AO00443 1686 aa31.55■■■□□ 2.64
VAMP2-204ENST00000488857 NLRP13Q86W25 1043 aa31.55■■■□□ 2.64
VAMP2-204ENST00000488857 GLI3P10071 1580 aa31.55■■■□□ 2.64
VAMP2-204ENST00000488857 CD163L1Q9NR16 1453 aa31.53■■■□□ 2.64
VAMP2-204ENST00000488857 VPS72Q15906 364 aa31.53■■■□□ 2.64
VAMP2-204ENST00000488857 KIAA0232Q92628 1395 aa31.53■■■□□ 2.64
VAMP2-204ENST00000488857 PRDM11Q9NQV5 511 aa31.52■■■□□ 2.64
VAMP2-204ENST00000488857 BTG4Q9NY30 223 aa31.51■■■□□ 2.63
VAMP2-204ENST00000488857 CPDO75976 1380 aa31.51■■■□□ 2.63
VAMP2-204ENST00000488857 KTN1Q86UP2 1357 aaKnown RBP31.51■■■□□ 2.63
VAMP2-204ENST00000488857 TTC21BQ7Z4L5 1316 aa31.5■■■□□ 2.63
VAMP2-204ENST00000488857 SLIT3O75094 1523 aa31.5■■■□□ 2.63
VAMP2-204ENST00000488857 TTC21AQ8NDW8 1320 aa31.49■■■□□ 2.63
VAMP2-204ENST00000488857 NINLQ9Y2I6 1382 aa31.49■■■□□ 2.63
VAMP2-204ENST00000488857 GCP02774 474 aa31.47■■■□□ 2.63
VAMP2-204ENST00000488857 NLRP6P59044 892 aa31.46■■■□□ 2.63
VAMP2-204ENST00000488857 ZC3H6P61129 1189 aaKnown RBP31.46■■■□□ 2.63
VAMP2-204ENST00000488857 SLC12A5Q9H2X9 1139 aa31.46■■■□□ 2.63
VAMP2-204ENST00000488857 TMC1Q8TDI8 760 aa31.45■■■□□ 2.63
VAMP2-204ENST00000488857 LMO7Q8WWI1 1683 aa31.44■■■□□ 2.62
VAMP2-204ENST00000488857 TMF1P82094 1093 aa31.43■■■□□ 2.62
VAMP2-204ENST00000488857 USP54Q70EL1 1684 aa31.42■■■□□ 2.62
VAMP2-204ENST00000488857 HDGFL2Q7Z4V5 671 aaPredicted RBP31.42■■■□□ 2.62
VAMP2-204ENST00000488857 TERF2IPQ9NYB0 399 aa31.42■■■□□ 2.62
VAMP2-204ENST00000488857 ONECUT3O60422 494 aaPredicted RBP31.41■■■□□ 2.62
VAMP2-204ENST00000488857 CHRNA2Q15822 529 aa31.41■■■□□ 2.62
VAMP2-204ENST00000488857 A0A1W2PP64 1363 aa31.41■■■□□ 2.62
VAMP2-204ENST00000488857 EDC4Q6P2E9 1401 aaKnown RBP31.41■■■□□ 2.62
VAMP2-204ENST00000488857 UPF1Q92900 1129 aaKnown RBP eCLIP31.39■■■□□ 2.62
VAMP2-204ENST00000488857 CCDC9Q9Y3X0 531 aaKnown RBP31.38■■■□□ 2.61
VAMP2-204ENST00000488857 USP31Q70CQ4 1352 aa31.38■■■□□ 2.61
VAMP2-204ENST00000488857 CAMTA1Q9Y6Y1 1673 aa31.38■■■□□ 2.61
VAMP2-204ENST00000488857 SPATA31A5Q5VU36 1347 aa31.37■■■□□ 2.61
VAMP2-204ENST00000488857 SPATA31A7Q8IWB4 1347 aa31.37■■■□□ 2.61
VAMP2-204ENST00000488857 EP400Q96L91 3159 aa31.37■■■□□ 2.61
VAMP2-204ENST00000488857 CDCA8Q53HL2 280 aa31.36■■■□□ 2.61
VAMP2-204ENST00000488857 BRWD3Q6RI45 1802 aa31.35■■■□□ 2.61
VAMP2-204ENST00000488857 KCNH5Q8NCM2 988 aa31.34■■■□□ 2.61
VAMP2-204ENST00000488857 AATKQ6ZMQ8 1374 aa31.33■■■□□ 2.61
VAMP2-204ENST00000488857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.33■■■□□ 2.61
VAMP2-204ENST00000488857 NFAT5O94916 1531 aa31.33■■■□□ 2.61
VAMP2-204ENST00000488857 COL18A1P39060 1754 aa31.32■■■□□ 2.6
VAMP2-204ENST00000488857 ANKRD36BQ8N2N9 1353 aa31.31■■■□□ 2.6
VAMP2-204ENST00000488857 SEPT12Q8IYM1 358 aa31.31■■■□□ 2.6
VAMP2-204ENST00000488857 SPATA31A1Q5TZJ5 1347 aa31.29■■■□□ 2.6
VAMP2-204ENST00000488857 COL5A2P05997 1499 aaPredicted RBP31.29■■■□□ 2.6
VAMP2-204ENST00000488857 NME9Q86XW9 330 aa31.29■■■□□ 2.6
VAMP2-204ENST00000488857 THSD7AQ9UPZ6 1657 aa31.29■■■□□ 2.6
VAMP2-204ENST00000488857 ARHGEF25Q86VW2 580 aa31.28■■■□□ 2.6
VAMP2-204ENST00000488857 STRN4Q9NRL3 753 aa31.28■■■□□ 2.6
VAMP2-204ENST00000488857 FAM98CQ17RN3 349 aaKnown RBP31.27■■■□□ 2.6
VAMP2-204ENST00000488857 ABCC6O95255 1503 aa31.27■■■□□ 2.6
VAMP2-204ENST00000488857 MYOM1P52179 1685 aa31.26■■■□□ 2.6
VAMP2-204ENST00000488857 EVA1CP58658 441 aa31.26■■■□□ 2.59
VAMP2-204ENST00000488857 EIF4G2P78344 907 aaKnown RBP eCLIP31.26■■■□□ 2.59
VAMP2-204ENST00000488857 ZRANB1Q9UGI0 708 aa31.26■■■□□ 2.59
VAMP2-204ENST00000488857 OVOS2A0A0J9YW53 1432 aa31.25■■■□□ 2.59
VAMP2-204ENST00000488857 OVOS2Q6IE36 1432 aa31.25■■■□□ 2.59
VAMP2-204ENST00000488857 LARP1Q6PKG0 1096 aaKnown RBP31.23■■■□□ 2.59
VAMP2-204ENST00000488857 HSPA5P11021 654 aaKnown RBP31.2■■■□□ 2.59
VAMP2-204ENST00000488857 BARGINQ6ZT62 677 aa31.2■■■□□ 2.59
VAMP2-204ENST00000488857 CRB1P82279 1406 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms