RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CDC42BPGQ6DT37 1551 aa18.16■□□□□ 0.5
COPS7B-221ENST00000488111 FYB1O15117 783 aa18.16■□□□□ 0.5
COPS7B-221ENST00000488111 ESCO1Q5FWF5 840 aa18.15■□□□□ 0.5
COPS7B-221ENST00000488111 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
COPS7B-221ENST00000488111 RGPD8O14715 1765 aaPredicted RBP18.15■□□□□ 0.5
COPS7B-221ENST00000488111 FMN2Q9NZ56 1722 aa18.15■□□□□ 0.5
COPS7B-221ENST00000488111 AEBP2Q6ZN18 517 aaPredicted RBP18.15■□□□□ 0.5
COPS7B-221ENST00000488111 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
COPS7B-221ENST00000488111 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
COPS7B-221ENST00000488111 ATF3P18847 181 aa18.13■□□□□ 0.49
COPS7B-221ENST00000488111 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
COPS7B-221ENST00000488111 ORAI2Q96SN7 254 aa18.13■□□□□ 0.49
COPS7B-221ENST00000488111 ANP32AP39687 249 aaKnown RBP18.13■□□□□ 0.49
COPS7B-221ENST00000488111 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
COPS7B-221ENST00000488111 NLRP13Q86W25 1043 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 NME9Q86XW9 330 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 LRRC7Q96NW7 1537 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
COPS7B-221ENST00000488111 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
COPS7B-221ENST00000488111 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
COPS7B-221ENST00000488111 MSH6P52701 1360 aa18.1■□□□□ 0.49
COPS7B-221ENST00000488111 NCOA3Q9Y6Q9 1424 aa18.09■□□□□ 0.49
COPS7B-221ENST00000488111 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
COPS7B-221ENST00000488111 POLR3AO14802 1390 aaPredicted RBP18.09■□□□□ 0.49
COPS7B-221ENST00000488111 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
COPS7B-221ENST00000488111 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
COPS7B-221ENST00000488111 USP6P35125 1406 aa18.08■□□□□ 0.49
COPS7B-221ENST00000488111 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.48
COPS7B-221ENST00000488111 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
COPS7B-221ENST00000488111 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.48
COPS7B-221ENST00000488111 NSD2O96028 1365 aa18.08■□□□□ 0.48
COPS7B-221ENST00000488111 FOXO3O43524 673 aa18.07■□□□□ 0.48
COPS7B-221ENST00000488111 FBLN1P23142 703 aa18.07■□□□□ 0.48
COPS7B-221ENST00000488111 ITSN1Q15811 1721 aa18.07■□□□□ 0.48
COPS7B-221ENST00000488111 C1orf167Q5SNV9 1468 aa18.07■□□□□ 0.48
COPS7B-221ENST00000488111 AKAP12Q02952 1782 aa18.06■□□□□ 0.48
COPS7B-221ENST00000488111 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
COPS7B-221ENST00000488111 PSME1Q06323 249 aa18.05■□□□□ 0.48
COPS7B-221ENST00000488111 MST1RQ04912 1400 aa18.05■□□□□ 0.48
COPS7B-221ENST00000488111 MON2Q7Z3U7 1717 aa18.05■□□□□ 0.48
COPS7B-221ENST00000488111 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
COPS7B-221ENST00000488111 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
COPS7B-221ENST00000488111 DCCP43146 1447 aa18.04■□□□□ 0.48
COPS7B-221ENST00000488111 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
COPS7B-221ENST00000488111 COG3Q96JB2 828 aa18.03■□□□□ 0.48
COPS7B-221ENST00000488111 SSH2Q76I76 1423 aa18.03■□□□□ 0.48
COPS7B-221ENST00000488111 MTHFSP49914 203 aa18.03■□□□□ 0.48
COPS7B-221ENST00000488111 IL27Q8NEV9 243 aa18.03■□□□□ 0.48
COPS7B-221ENST00000488111 DDX17Q92841 729 aaKnown RBP18.03■□□□□ 0.48
COPS7B-221ENST00000488111 SOX12O15370 315 aa18.01■□□□□ 0.47
COPS7B-221ENST00000488111 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
COPS7B-221ENST00000488111 KIF20BQ96Q89 1820 aa18■□□□□ 0.47
COPS7B-221ENST00000488111 SLAIN2Q9P270 581 aa18■□□□□ 0.47
COPS7B-221ENST00000488111 TTC21AQ8NDW8 1320 aa18■□□□□ 0.47
COPS7B-221ENST00000488111 NRKQ7Z2Y5 1582 aa18■□□□□ 0.47
COPS7B-221ENST00000488111 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
COPS7B-221ENST00000488111 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
COPS7B-221ENST00000488111 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
COPS7B-221ENST00000488111 PPM1GO15355 546 aaPredicted RBP17.98■□□□□ 0.47
COPS7B-221ENST00000488111 NLRP6P59044 892 aa17.98■□□□□ 0.47
COPS7B-221ENST00000488111 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
COPS7B-221ENST00000488111 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
COPS7B-221ENST00000488111 RRS1Q15050 365 aaKnown RBP17.97■□□□□ 0.47
COPS7B-221ENST00000488111 LMOD2Q6P5Q4 547 aa17.97■□□□□ 0.47
COPS7B-221ENST00000488111 BRINP3Q76B58 766 aa17.96■□□□□ 0.47
COPS7B-221ENST00000488111 USP35Q9P2H5 1018 aa17.96■□□□□ 0.47
COPS7B-221ENST00000488111 LTBP4Q8N2S1 1624 aa17.96■□□□□ 0.47
COPS7B-221ENST00000488111 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
COPS7B-221ENST00000488111 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
COPS7B-221ENST00000488111 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.46
COPS7B-221ENST00000488111 OVOS2A0A0J9YW53 1432 aa17.95■□□□□ 0.46
COPS7B-221ENST00000488111 OVOS2Q6IE36 1432 aa17.95■□□□□ 0.46
COPS7B-221ENST00000488111 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
COPS7B-221ENST00000488111 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
COPS7B-221ENST00000488111 CFAP53Q96M91 514 aa17.93■□□□□ 0.46
COPS7B-221ENST00000488111 PIK3C2AO00443 1686 aa17.92■□□□□ 0.46
COPS7B-221ENST00000488111 USP31Q70CQ4 1352 aa17.92■□□□□ 0.46
COPS7B-221ENST00000488111 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
COPS7B-221ENST00000488111 KIF1AQ12756 1690 aa17.91■□□□□ 0.46
COPS7B-221ENST00000488111 AATKQ6ZMQ8 1374 aa17.9■□□□□ 0.46
COPS7B-221ENST00000488111 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
COPS7B-221ENST00000488111 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
COPS7B-221ENST00000488111 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
COPS7B-221ENST00000488111 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
COPS7B-221ENST00000488111 NEFMP07197 916 aa17.86■□□□□ 0.45
COPS7B-221ENST00000488111 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
COPS7B-221ENST00000488111 MAP3K19Q56UN5 1328 aa17.86■□□□□ 0.45
COPS7B-221ENST00000488111 PNPLA6Q8IY17 1366 aa17.86■□□□□ 0.45
COPS7B-221ENST00000488111 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
COPS7B-221ENST00000488111 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
COPS7B-221ENST00000488111 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
COPS7B-221ENST00000488111 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
COPS7B-221ENST00000488111 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
COPS7B-221ENST00000488111 HSP90AB2PQ58FF8 381 aa17.84■□□□□ 0.45
COPS7B-221ENST00000488111 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
COPS7B-221ENST00000488111 PXDNQ92626 1479 aa17.84■□□□□ 0.45
COPS7B-221ENST00000488111 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms