RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 NNTQ13423 1086 aa7□□□□□ -1.29
R3HDM1-219ENST00000488035 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
R3HDM1-219ENST00000488035 GPCPD1Q9NPB8 672 aa7□□□□□ -1.29
R3HDM1-219ENST00000488035 C6orf229H3BNL8 230 aa6.99□□□□□ -1.29
R3HDM1-219ENST00000488035 FDX1P10109 184 aa6.99□□□□□ -1.29
R3HDM1-219ENST00000488035 KRT76Q01546 638 aa6.99□□□□□ -1.29
R3HDM1-219ENST00000488035 PTPRNQ16849 979 aa6.99□□□□□ -1.29
R3HDM1-219ENST00000488035 KRI1Q8N9T8 703 aaKnown RBP6.99□□□□□ -1.29
R3HDM1-219ENST00000488035 TLL2Q9Y6L7 1015 aa6.99□□□□□ -1.29
R3HDM1-219ENST00000488035 UNC93B1Q9H1C4 597 aa6.98□□□□□ -1.29
R3HDM1-219ENST00000488035 FAM217BQ9NTX9 383 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-219ENST00000488035 EVA1BQ9NVM1 165 aa6.98□□□□□ -1.29
R3HDM1-219ENST00000488035 WDR4P57081 412 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-219ENST00000488035 FOXK2Q01167 660 aa6.97□□□□□ -1.29
R3HDM1-219ENST00000488035 KCNH2Q12809 1159 aa6.96□□□□□ -1.3
R3HDM1-219ENST00000488035 XP32Q5T750 250 aa6.96□□□□□ -1.3
R3HDM1-219ENST00000488035 BAP1Q92560 729 aa6.96□□□□□ -1.3
R3HDM1-219ENST00000488035 CDK15Q96Q40 435 aa6.96□□□□□ -1.3
R3HDM1-219ENST00000488035 MAN1A2O60476 641 aa6.95□□□□□ -1.3
R3HDM1-219ENST00000488035 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-219ENST00000488035 ZNF511Q8NB15 262 aa6.95□□□□□ -1.3
R3HDM1-219ENST00000488035 SPDYE5A6NIY4 337 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 ARHGEF15O94989 841 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 FAM174AQ8TBP5 190 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 NANOS1Q8WY41 292 aaKnown RBP6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 CCDC102AQ96A19 550 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 PCDHGC3Q9UN70 934 aa6.94□□□□□ -1.3
R3HDM1-219ENST00000488035 ZNF385CQ66K41 422 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-219ENST00000488035 KANK3Q6NY19 840 aa6.93□□□□□ -1.3
R3HDM1-219ENST00000488035 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
R3HDM1-219ENST00000488035 SLURP2P0DP57 97 aa6.92□□□□□ -1.3
R3HDM1-219ENST00000488035 PRR7Q8TB68 274 aa6.92□□□□□ -1.3
R3HDM1-219ENST00000488035 SOS2Q07890 1332 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-219ENST00000488035 UPP2O95045 317 aa6.91□□□□□ -1.3
R3HDM1-219ENST00000488035 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
R3HDM1-219ENST00000488035 CNTNAP3BQ96NU0 1288 aa6.91□□□□□ -1.3
R3HDM1-219ENST00000488035 CNTNAP3Q9BZ76 1288 aa6.91□□□□□ -1.3
R3HDM1-219ENST00000488035 MTMR2Q13614 643 aa6.9□□□□□ -1.3
R3HDM1-219ENST00000488035 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
R3HDM1-219ENST00000488035 ZIC2O95409 532 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 NR5A1Q13285 461 aa6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 SPIRE2Q8WWL2 714 aa6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 ITPKCQ96DU7 683 aa6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 BCANQ96GW7 911 aa6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 DNMT3LQ9UJW3 386 aa6.89□□□□□ -1.31
R3HDM1-219ENST00000488035 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-219ENST00000488035 SSTR3P32745 418 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-219ENST00000488035 CTHP32929 405 aa6.88□□□□□ -1.31
R3HDM1-219ENST00000488035 MOXD2PA6NHM9 499 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 SPTLC1O15269 473 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 NR3C2P08235 984 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 NDUFV2P19404 249 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 IRS1P35568 1242 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 ARID5BQ14865 1188 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 WHAMMQ8TF30 809 aa6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-219ENST00000488035 ADAM23O75077 832 aa6.86□□□□□ -1.31
R3HDM1-219ENST00000488035 BMP2P12643 396 aa6.86□□□□□ -1.31
R3HDM1-219ENST00000488035 GJA5P36382 358 aa6.86□□□□□ -1.31
R3HDM1-219ENST00000488035 GRM5P41594 1212 aa6.86□□□□□ -1.31
R3HDM1-219ENST00000488035 C6orf118Q5T5N4 469 aa6.86□□□□□ -1.31
R3HDM1-219ENST00000488035 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
R3HDM1-219ENST00000488035 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
R3HDM1-219ENST00000488035 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.85□□□□□ -1.31
R3HDM1-219ENST00000488035 RNFT1Q5M7Z0 435 aa6.85□□□□□ -1.31
R3HDM1-219ENST00000488035 SVOPQ8N4V2 548 aa6.85□□□□□ -1.31
R3HDM1-219ENST00000488035 SCARF2Q96GP6 870 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-219ENST00000488035 AGERQ15109 404 aa6.84□□□□□ -1.31
R3HDM1-219ENST00000488035 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
R3HDM1-219ENST00000488035 PTSQ03393 145 aa6.83□□□□□ -1.32
R3HDM1-219ENST00000488035 BPHLQ86WA6 291 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-219ENST00000488035 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
R3HDM1-219ENST00000488035 TSEN34Q9BSV6 310 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-219ENST00000488035 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
R3HDM1-219ENST00000488035 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
R3HDM1-219ENST00000488035 SLC35F4A4IF30 521 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 F12P00748 615 aaPredicted RBP6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 MARSP56192 900 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 CCDC155Q8N6L0 562 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 ARMC2Q8NEN0 867 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 C1QTNF2Q9BXJ5 285 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 ZBTB3Q9H5J0 574 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 MAP4K5Q9Y4K4 846 aa6.8□□□□□ -1.32
R3HDM1-219ENST00000488035 TTLL8A6PVC2 850 aa6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 MSTNO14793 375 aa6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 ITGB2P05107 769 aa6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 PRKCSHP14314 528 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 RSBN1LQ6PCB5 846 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 BEGAINQ9BUH8 593 aa6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 MAP10Q9P2G4 905 aa6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 EMILIN1Q9Y6C2 1016 aa6.79□□□□□ -1.32
R3HDM1-219ENST00000488035 CFAP99D6REC4 459 aa6.78□□□□□ -1.32
R3HDM1-219ENST00000488035 AMHR2Q16671 573 aa6.78□□□□□ -1.32
R3HDM1-219ENST00000488035 PLA2G4EQ3MJ16 856 aa6.78□□□□□ -1.32
R3HDM1-219ENST00000488035 PRPF38BQ5VTL8 546 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms