RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
RAB11FIP3-210ENST00000487899 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
RAB11FIP3-210ENST00000487899 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
RAB11FIP3-210ENST00000487899 NUDT16Q96DE0 195 aaKnown RBP16.24■□□□□ 0.19
RAB11FIP3-210ENST00000487899 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
RAB11FIP3-210ENST00000487899 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
RAB11FIP3-210ENST00000487899 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
RAB11FIP3-210ENST00000487899 WNK3Q9BYP7 1800 aa16.23■□□□□ 0.19
RAB11FIP3-210ENST00000487899 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
RAB11FIP3-210ENST00000487899 CDK19Q9BWU1 502 aa16.22■□□□□ 0.19
RAB11FIP3-210ENST00000487899 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
RAB11FIP3-210ENST00000487899 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
RAB11FIP3-210ENST00000487899 TNS1Q9HBL0 1735 aaKnown RBP16.21■□□□□ 0.19
RAB11FIP3-210ENST00000487899 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
RAB11FIP3-210ENST00000487899 NGDNQ8NEJ9 315 aaKnown RBP16.2■□□□□ 0.18
RAB11FIP3-210ENST00000487899 SRCAPQ6ZRS2 3230 aa16.2■□□□□ 0.18
RAB11FIP3-210ENST00000487899 SLIT3O75094 1523 aa16.19■□□□□ 0.18
RAB11FIP3-210ENST00000487899 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
RAB11FIP3-210ENST00000487899 RGPD1P0DJD0 1748 aa16.19■□□□□ 0.18
RAB11FIP3-210ENST00000487899 ACEP12821 1306 aa16.19■□□□□ 0.18
RAB11FIP3-210ENST00000487899 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
RAB11FIP3-210ENST00000487899 VPS72Q15906 364 aa16.18■□□□□ 0.18
RAB11FIP3-210ENST00000487899 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
RAB11FIP3-210ENST00000487899 USP6P35125 1406 aa16.18■□□□□ 0.18
RAB11FIP3-210ENST00000487899 COL18A1P39060 1754 aa16.18■□□□□ 0.18
RAB11FIP3-210ENST00000487899 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
RAB11FIP3-210ENST00000487899 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
RAB11FIP3-210ENST00000487899 KIAA0232Q92628 1395 aa16.16■□□□□ 0.18
RAB11FIP3-210ENST00000487899 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
RAB11FIP3-210ENST00000487899 USP19O94966 1318 aa16.16■□□□□ 0.18
RAB11FIP3-210ENST00000487899 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
RAB11FIP3-210ENST00000487899 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
RAB11FIP3-210ENST00000487899 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
RAB11FIP3-210ENST00000487899 SSH2Q76I76 1423 aa16.15■□□□□ 0.18
RAB11FIP3-210ENST00000487899 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.18
RAB11FIP3-210ENST00000487899 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
RAB11FIP3-210ENST00000487899 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
RAB11FIP3-210ENST00000487899 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
RAB11FIP3-210ENST00000487899 BTG4Q9NY30 223 aa16.13■□□□□ 0.17
RAB11FIP3-210ENST00000487899 LTN1O94822 1766 aa16.13■□□□□ 0.17
RAB11FIP3-210ENST00000487899 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
RAB11FIP3-210ENST00000487899 CPDO75976 1380 aa16.12■□□□□ 0.17
RAB11FIP3-210ENST00000487899 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
RAB11FIP3-210ENST00000487899 NFAT5O94916 1531 aa16.11■□□□□ 0.17
RAB11FIP3-210ENST00000487899 ONECUT3O60422 494 aaPredicted RBP16.11■□□□□ 0.17
RAB11FIP3-210ENST00000487899 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
RAB11FIP3-210ENST00000487899 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
RAB11FIP3-210ENST00000487899 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
RAB11FIP3-210ENST00000487899 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
RAB11FIP3-210ENST00000487899 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
RAB11FIP3-210ENST00000487899 TONSLQ96HA7 1378 aa16.1■□□□□ 0.17
RAB11FIP3-210ENST00000487899 CD163L1Q9NR16 1453 aa16.1■□□□□ 0.17
RAB11FIP3-210ENST00000487899 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
RAB11FIP3-210ENST00000487899 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
RAB11FIP3-210ENST00000487899 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
RAB11FIP3-210ENST00000487899 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
RAB11FIP3-210ENST00000487899 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
RAB11FIP3-210ENST00000487899 PEAK1Q9H792 1746 aa16.08■□□□□ 0.16
RAB11FIP3-210ENST00000487899 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
RAB11FIP3-210ENST00000487899 ABCC6O95255 1503 aa16.07■□□□□ 0.16
RAB11FIP3-210ENST00000487899 RREB1Q92766 1687 aa16.07■□□□□ 0.16
RAB11FIP3-210ENST00000487899 SBF2Q86WG5 1849 aa16.07■□□□□ 0.16
RAB11FIP3-210ENST00000487899 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
RAB11FIP3-210ENST00000487899 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
RAB11FIP3-210ENST00000487899 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
RAB11FIP3-210ENST00000487899 CABP1Q9NZU7 370 aa16.06■□□□□ 0.16
RAB11FIP3-210ENST00000487899 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
RAB11FIP3-210ENST00000487899 ZC3H6P61129 1189 aaKnown RBP16.05■□□□□ 0.16
RAB11FIP3-210ENST00000487899 MYOM1P52179 1685 aa16.05■□□□□ 0.16
RAB11FIP3-210ENST00000487899 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
RAB11FIP3-210ENST00000487899 NUP188Q5SRE5 1749 aa16.03■□□□□ 0.16
RAB11FIP3-210ENST00000487899 CCDC125Q86Z20 511 aa16.03■□□□□ 0.16
RAB11FIP3-210ENST00000487899 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.15
RAB11FIP3-210ENST00000487899 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.15
RAB11FIP3-210ENST00000487899 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
RAB11FIP3-210ENST00000487899 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
RAB11FIP3-210ENST00000487899 LRP5O75197 1615 aa16.01■□□□□ 0.15
RAB11FIP3-210ENST00000487899 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
RAB11FIP3-210ENST00000487899 A0A0G2JS52 829 aa16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 GCP02774 474 aa16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 MYT1Q01538 1121 aa16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 STRN4Q9NRL3 753 aa16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 DISP2A7MBM2 1401 aa16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
RAB11FIP3-210ENST00000487899 TTC21BQ7Z4L5 1316 aa15.99■□□□□ 0.15
RAB11FIP3-210ENST00000487899 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
RAB11FIP3-210ENST00000487899 CRB1P82279 1406 aa15.99■□□□□ 0.15
RAB11FIP3-210ENST00000487899 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
RAB11FIP3-210ENST00000487899 LARP1Q6PKG0 1096 aaKnown RBP15.98■□□□□ 0.15
RAB11FIP3-210ENST00000487899 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
RAB11FIP3-210ENST00000487899 NLRP6P59044 892 aa15.97■□□□□ 0.15
RAB11FIP3-210ENST00000487899 FAM182BQ5T319 152 aa15.97■□□□□ 0.15
RAB11FIP3-210ENST00000487899 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
RAB11FIP3-210ENST00000487899 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
RAB11FIP3-210ENST00000487899 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
RAB11FIP3-210ENST00000487899 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
RAB11FIP3-210ENST00000487899 BARGINQ6ZT62 677 aa15.95■□□□□ 0.14
RAB11FIP3-210ENST00000487899 TESK2Q96S53 571 aa15.95■□□□□ 0.14
RAB11FIP3-210ENST00000487899 USP31Q70CQ4 1352 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms