RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
FGFR1-222ENST00000487647 SSH2Q76I76 1423 aa19.57■□□□□ 0.72
FGFR1-222ENST00000487647 NME9Q86XW9 330 aa19.57■□□□□ 0.72
FGFR1-222ENST00000487647 C14orf37Q86TY3 774 aa19.56■□□□□ 0.72
FGFR1-222ENST00000487647 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
FGFR1-222ENST00000487647 NALCNQ8IZF0 1738 aa19.55■□□□□ 0.72
FGFR1-222ENST00000487647 PNPLA6Q8IY17 1366 aa19.55■□□□□ 0.72
FGFR1-222ENST00000487647 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
FGFR1-222ENST00000487647 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
FGFR1-222ENST00000487647 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
FGFR1-222ENST00000487647 NRKQ7Z2Y5 1582 aa19.53■□□□□ 0.72
FGFR1-222ENST00000487647 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.72
FGFR1-222ENST00000487647 POLKQ9UBT6 870 aa19.51■□□□□ 0.71
FGFR1-222ENST00000487647 USP31Q70CQ4 1352 aa19.51■□□□□ 0.71
FGFR1-222ENST00000487647 OVOS2A0A0J9YW53 1432 aa19.5■□□□□ 0.71
FGFR1-222ENST00000487647 DCCP43146 1447 aa19.5■□□□□ 0.71
FGFR1-222ENST00000487647 OVOS2Q6IE36 1432 aa19.5■□□□□ 0.71
FGFR1-222ENST00000487647 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
FGFR1-222ENST00000487647 RBM33Q96EV2 1170 aaKnown RBP19.49■□□□□ 0.71
FGFR1-222ENST00000487647 COL3A1P02461 1466 aaPredicted RBP19.49■□□□□ 0.71
FGFR1-222ENST00000487647 DIAPH1O60610 1272 aaKnown RBP19.48■□□□□ 0.71
FGFR1-222ENST00000487647 TMEM94Q12767 1356 aa19.48■□□□□ 0.71
FGFR1-222ENST00000487647 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
FGFR1-222ENST00000487647 PNNQ9H307 717 aaKnown RBP19.47■□□□□ 0.71
FGFR1-222ENST00000487647 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
FGFR1-222ENST00000487647 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
FGFR1-222ENST00000487647 ESCO1Q5FWF5 840 aa19.47■□□□□ 0.71
FGFR1-222ENST00000487647 DMRT2Q9Y5R5 561 aa19.47■□□□□ 0.71
FGFR1-222ENST00000487647 CDK12Q9NYV4 1490 aaPredicted RBP19.46■□□□□ 0.71
FGFR1-222ENST00000487647 RGPD8O14715 1765 aaPredicted RBP19.46■□□□□ 0.71
FGFR1-222ENST00000487647 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
FGFR1-222ENST00000487647 ATF3P18847 181 aa19.45■□□□□ 0.7
FGFR1-222ENST00000487647 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
FGFR1-222ENST00000487647 STRCQ7RTU9 1775 aa19.44■□□□□ 0.7
FGFR1-222ENST00000487647 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
FGFR1-222ENST00000487647 APAF1O14727 1248 aa19.43■□□□□ 0.7
FGFR1-222ENST00000487647 CADPS2Q86UW7 1296 aa19.43■□□□□ 0.7
FGFR1-222ENST00000487647 NEFLP07196 543 aa19.43■□□□□ 0.7
FGFR1-222ENST00000487647 PSME1Q06323 249 aa19.43■□□□□ 0.7
FGFR1-222ENST00000487647 SALL2Q9Y467 1007 aaPredicted RBP19.43■□□□□ 0.7
FGFR1-222ENST00000487647 ZNF521Q96K83 1311 aa19.43■□□□□ 0.7
FGFR1-222ENST00000487647 EMILIN1Q9Y6C2 1016 aa19.42■□□□□ 0.7
FGFR1-222ENST00000487647 C1orf167Q5SNV9 1468 aa19.42■□□□□ 0.7
FGFR1-222ENST00000487647 PPM1GO15355 546 aaPredicted RBP19.41■□□□□ 0.7
FGFR1-222ENST00000487647 LRRC7Q96NW7 1537 aa19.41■□□□□ 0.7
FGFR1-222ENST00000487647 MSH6P52701 1360 aa19.4■□□□□ 0.7
FGFR1-222ENST00000487647 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
FGFR1-222ENST00000487647 FCHSD2O94868 740 aa19.4■□□□□ 0.7
FGFR1-222ENST00000487647 NLRP6P59044 892 aa19.4■□□□□ 0.7
FGFR1-222ENST00000487647 ABTB2Q8N961 1025 aa19.4■□□□□ 0.7
FGFR1-222ENST00000487647 KIF24Q5T7B8 1368 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 FBLN1P23142 703 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 IL13P35225 146 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 RRS1Q15050 365 aaKnown RBP19.39■□□□□ 0.69
FGFR1-222ENST00000487647 CCDC27Q2M243 656 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 ORAI2Q96SN7 254 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 SUPT16HQ9Y5B9 1047 aaKnown RBP19.39■□□□□ 0.69
FGFR1-222ENST00000487647 STRCP1A6NGW2 1772 aa19.39■□□□□ 0.69
FGFR1-222ENST00000487647 MAP2P11137 1827 aaKnown RBP19.38■□□□□ 0.69
FGFR1-222ENST00000487647 MST1RQ04912 1400 aa19.38■□□□□ 0.69
FGFR1-222ENST00000487647 USP54Q70EL1 1684 aa19.37■□□□□ 0.69
FGFR1-222ENST00000487647 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
FGFR1-222ENST00000487647 TCP11L2Q8N4U5 519 aa19.37■□□□□ 0.69
FGFR1-222ENST00000487647 PLEKHF1Q96S99 279 aa19.37■□□□□ 0.69
FGFR1-222ENST00000487647 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
FGFR1-222ENST00000487647 PIK3C2AO00443 1686 aa19.36■□□□□ 0.69
FGFR1-222ENST00000487647 IQSEC2Q5JU85 1478 aa19.36■□□□□ 0.69
FGFR1-222ENST00000487647 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
FGFR1-222ENST00000487647 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
FGFR1-222ENST00000487647 NEFMP07197 916 aa19.35■□□□□ 0.69
FGFR1-222ENST00000487647 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
FGFR1-222ENST00000487647 FOXO3O43524 673 aa19.34■□□□□ 0.69
FGFR1-222ENST00000487647 CDCA7LQ96GN5 454 aa19.34■□□□□ 0.69
FGFR1-222ENST00000487647 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.69
FGFR1-222ENST00000487647 WDR63Q8IWG1 891 aa19.33■□□□□ 0.69
FGFR1-222ENST00000487647 WWC1Q8IX03 1113 aa19.33■□□□□ 0.69
FGFR1-222ENST00000487647 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.69
FGFR1-222ENST00000487647 FLT4P35916 1363 aa19.33■□□□□ 0.69
FGFR1-222ENST00000487647 MAP3K19Q56UN5 1328 aa19.33■□□□□ 0.68
FGFR1-222ENST00000487647 ZNF335Q9H4Z2 1342 aaPredicted RBP19.33■□□□□ 0.68
FGFR1-222ENST00000487647 E9PSI1 815 aa19.33■□□□□ 0.68
FGFR1-222ENST00000487647 SLFN5Q08AF3 891 aa19.32■□□□□ 0.68
FGFR1-222ENST00000487647 KRT28Q7Z3Y7 464 aa19.32■□□□□ 0.68
FGFR1-222ENST00000487647 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
FGFR1-222ENST00000487647 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
FGFR1-222ENST00000487647 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
FGFR1-222ENST00000487647 AMPHP49418 695 aa19.3■□□□□ 0.68
FGFR1-222ENST00000487647 FKBP8Q14318 412 aa19.3■□□□□ 0.68
FGFR1-222ENST00000487647 EIF4A2Q14240 407 aaKnown RBP19.29■□□□□ 0.68
FGFR1-222ENST00000487647 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
FGFR1-222ENST00000487647 NPHP3Q7Z494 1330 aa19.29■□□□□ 0.68
FGFR1-222ENST00000487647 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
FGFR1-222ENST00000487647 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
FGFR1-222ENST00000487647 RCAN3Q9UKA8 241 aa19.29■□□□□ 0.68
FGFR1-222ENST00000487647 PRKAR2BP31323 418 aa19.28■□□□□ 0.68
FGFR1-222ENST00000487647 HSP90AB2PQ58FF8 381 aa19.28■□□□□ 0.68
FGFR1-222ENST00000487647 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
FGFR1-222ENST00000487647 SOX12O15370 315 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms