RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 CFAP43Q8NDM7 1665 aa8.81□□□□□ -1
R3HDM1-218ENST00000487294 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
R3HDM1-218ENST00000487294 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
R3HDM1-218ENST00000487294 HECW2Q9P2P5 1572 aa8.8□□□□□ -1
R3HDM1-218ENST00000487294 CD109Q6YHK3 1445 aa8.8□□□□□ -1
R3HDM1-218ENST00000487294 DGAT1O75907 488 aa8.79□□□□□ -1
R3HDM1-218ENST00000487294 CLCN1P35523 988 aa8.79□□□□□ -1
R3HDM1-218ENST00000487294 PKDCCQ504Y2 493 aa8.79□□□□□ -1
R3HDM1-218ENST00000487294 AK7Q96M32 723 aa8.79□□□□□ -1
R3HDM1-218ENST00000487294 ARAP3Q8WWN8 1544 aa8.79□□□□□ -1
R3HDM1-218ENST00000487294 TRIM66O15016 1216 aa8.78□□□□□ -1
R3HDM1-218ENST00000487294 CD46P15529 392 aa8.78□□□□□ -1
R3HDM1-218ENST00000487294 GCGRP47871 477 aa8.78□□□□□ -1
R3HDM1-218ENST00000487294 AMHR2Q16671 573 aa8.78□□□□□ -1
R3HDM1-218ENST00000487294 CTTNBP2Q8WZ74 1663 aa8.78□□□□□ -1
R3HDM1-218ENST00000487294 PRXQ9BXM0 1461 aa8.77□□□□□ -1
R3HDM1-218ENST00000487294 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
R3HDM1-218ENST00000487294 ZNF697Q5TEC3 545 aa8.77□□□□□ -1.01
R3HDM1-218ENST00000487294 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
R3HDM1-218ENST00000487294 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
R3HDM1-218ENST00000487294 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
R3HDM1-218ENST00000487294 LIAT1Q6ZQX7 453 aa8.76□□□□□ -1.01
R3HDM1-218ENST00000487294 FUT2Q10981 343 aa8.75□□□□□ -1.01
R3HDM1-218ENST00000487294 PUS10Q3MIT2 529 aaKnown RBP8.75□□□□□ -1.01
R3HDM1-218ENST00000487294 MYT1Q01538 1121 aa8.74□□□□□ -1.01
R3HDM1-218ENST00000487294 TTLL12Q14166 644 aaPredicted RBP8.74□□□□□ -1.01
R3HDM1-218ENST00000487294 ATP10BO94823 1461 aa8.73□□□□□ -1.01
R3HDM1-218ENST00000487294 GDF9O60383 454 aa8.73□□□□□ -1.01
R3HDM1-218ENST00000487294 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
R3HDM1-218ENST00000487294 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
R3HDM1-218ENST00000487294 GIGYF2Q6Y7W6 1299 aaKnown RBP8.72□□□□□ -1.01
R3HDM1-218ENST00000487294 SCUBE3Q8IX30 993 aa8.72□□□□□ -1.01
R3HDM1-218ENST00000487294 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
R3HDM1-218ENST00000487294 NEO1Q92859 1461 aa8.71□□□□□ -1.01
R3HDM1-218ENST00000487294 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 PDE4DQ08499 809 aa8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 MORN1Q5T089 497 aa8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 SPSB2Q99619 263 aa8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 ADAMTSL3P82987 1691 aa8.71□□□□□ -1.02
R3HDM1-218ENST00000487294 KIF21BO75037 1637 aa8.7□□□□□ -1.02
R3HDM1-218ENST00000487294 TNFRSF10AO00220 468 aa8.7□□□□□ -1.02
R3HDM1-218ENST00000487294 PLA2G2CQ5R387 149 aa8.7□□□□□ -1.02
R3HDM1-218ENST00000487294 KDM4AO75164 1064 aa8.69□□□□□ -1.02
R3HDM1-218ENST00000487294 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
R3HDM1-218ENST00000487294 PTPRMP28827 1452 aa8.69□□□□□ -1.02
R3HDM1-218ENST00000487294 SAMD9Q5K651 1589 aa8.69□□□□□ -1.02
R3HDM1-218ENST00000487294 RPIAP49247 311 aa8.68□□□□□ -1.02
R3HDM1-218ENST00000487294 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
R3HDM1-218ENST00000487294 MS4A1P11836 297 aa8.67□□□□□ -1.02
R3HDM1-218ENST00000487294 FBXO41Q8TF61 875 aa8.67□□□□□ -1.02
R3HDM1-218ENST00000487294 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
R3HDM1-218ENST00000487294 HLA-CQ95604 372 aa8.66□□□□□ -1.02
R3HDM1-218ENST00000487294 FRMPD1Q5SYB0 1578 aa8.65□□□□□ -1.02
R3HDM1-218ENST00000487294 THAP11Q96EK4 314 aa8.65□□□□□ -1.02
R3HDM1-218ENST00000487294 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
R3HDM1-218ENST00000487294 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.02
R3HDM1-218ENST00000487294 BCORL1Q5H9F3 1711 aa8.65□□□□□ -1.03
R3HDM1-218ENST00000487294 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
R3HDM1-218ENST00000487294 NUP153P49790 1475 aaKnown RBP8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 HOXA2O43364 376 aa8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 RAPGEF3O95398 923 aa8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 FMNL1O95466 1100 aaPredicted RBP8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 USP46P62068 366 aa8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 PCF11O94913 1555 aaKnown RBP8.64□□□□□ -1.03
R3HDM1-218ENST00000487294 FHOD3Q2V2M9 1422 aa8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 CRIPAKQ8N1N5 446 aa8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 AAASQ9NRG9 546 aa8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 LMTK3Q96Q04 1460 aa8.63□□□□□ -1.03
R3HDM1-218ENST00000487294 FOXC1Q12948 553 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 ZMYM4Q5VZL5 1548 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
R3HDM1-218ENST00000487294 RICTORQ6R327 1708 aa8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 POTECB2RU33 542 aa8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 CD2BP2O95400 341 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 DENND4BO75064 1496 aaPredicted RBP8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 MAGI2Q86UL8 1455 aa8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 EEA1Q15075 1411 aa8.61□□□□□ -1.03
R3HDM1-218ENST00000487294 AVPP01185 164 aa8.6□□□□□ -1.03
R3HDM1-218ENST00000487294 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
R3HDM1-218ENST00000487294 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-218ENST00000487294 AKNAQ7Z591 1439 aa8.6□□□□□ -1.03
R3HDM1-218ENST00000487294 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
R3HDM1-218ENST00000487294 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
R3HDM1-218ENST00000487294 NDUFV2P19404 249 aa8.59□□□□□ -1.03
R3HDM1-218ENST00000487294 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
R3HDM1-218ENST00000487294 GPBP1L1Q9HC44 474 aaPredicted RBP8.59□□□□□ -1.03
R3HDM1-218ENST00000487294 TOR4AQ9NXH8 423 aa8.59□□□□□ -1.03
R3HDM1-218ENST00000487294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms