RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 MYT1Q01538 1121 aa22.34■■□□□ 1.17
PFDN4-204ENST00000487129 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
PFDN4-204ENST00000487129 PRR36Q9H6K5 1346 aa22.32■■□□□ 1.16
PFDN4-204ENST00000487129 R3HDM1Q15032 1099 aaKnown RBP22.32■■□□□ 1.16
PFDN4-204ENST00000487129 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
PFDN4-204ENST00000487129 TULP4Q9NRJ4 1543 aa22.28■■□□□ 1.16
PFDN4-204ENST00000487129 EZH2Q15910 746 aaKnown RBP22.27■■□□□ 1.16
PFDN4-204ENST00000487129 CAMKK2Q96RR4 588 aa22.26■■□□□ 1.15
PFDN4-204ENST00000487129 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
PFDN4-204ENST00000487129 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
PFDN4-204ENST00000487129 POGKQ9P215 609 aa22.25■■□□□ 1.15
PFDN4-204ENST00000487129 SPATA31A1Q5TZJ5 1347 aa22.24■■□□□ 1.15
PFDN4-204ENST00000487129 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
PFDN4-204ENST00000487129 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
PFDN4-204ENST00000487129 MINK1Q8N4C8 1332 aaPredicted RBP22.21■■□□□ 1.15
PFDN4-204ENST00000487129 TRIM37O94972 964 aa22.2■■□□□ 1.14
PFDN4-204ENST00000487129 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
PFDN4-204ENST00000487129 EIF3AQ14152 1382 aaKnown RBP22.2■■□□□ 1.14
PFDN4-204ENST00000487129 KIAA0232Q92628 1395 aa22.2■■□□□ 1.14
PFDN4-204ENST00000487129 RREB1Q92766 1687 aa22.2■■□□□ 1.14
PFDN4-204ENST00000487129 WASLO00401 505 aaPredicted RBP22.19■■□□□ 1.14
PFDN4-204ENST00000487129 PHRF1Q9P1Y6 1649 aaKnown RBP22.19■■□□□ 1.14
PFDN4-204ENST00000487129 ATP7BP35670 1465 aa22.18■■□□□ 1.14
PFDN4-204ENST00000487129 PARD3Q8TEW0 1356 aa22.18■■□□□ 1.14
PFDN4-204ENST00000487129 CHRNA2Q15822 529 aa22.17■■□□□ 1.14
PFDN4-204ENST00000487129 FAM196AQ6ZSG2 479 aa22.17■■□□□ 1.14
PFDN4-204ENST00000487129 NUP188Q5SRE5 1749 aa22.17■■□□□ 1.14
PFDN4-204ENST00000487129 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.13
PFDN4-204ENST00000487129 NGDNQ8NEJ9 315 aaKnown RBP22.14■■□□□ 1.13
PFDN4-204ENST00000487129 APBA3O96018 575 aa22.13■■□□□ 1.13
PFDN4-204ENST00000487129 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
PFDN4-204ENST00000487129 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
PFDN4-204ENST00000487129 STRN4Q9NRL3 753 aa22.12■■□□□ 1.13
PFDN4-204ENST00000487129 CAMTA1Q9Y6Y1 1673 aa22.11■■□□□ 1.13
PFDN4-204ENST00000487129 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
PFDN4-204ENST00000487129 ZC3H6P61129 1189 aaKnown RBP22.1■■□□□ 1.13
PFDN4-204ENST00000487129 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
PFDN4-204ENST00000487129 NRKQ7Z2Y5 1582 aa22.1■■□□□ 1.13
PFDN4-204ENST00000487129 ARHGEF28Q8N1W1 1705 aaKnown RBP22.1■■□□□ 1.13
PFDN4-204ENST00000487129 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
PFDN4-204ENST00000487129 TOPAZ1Q8N9V7 1692 aa22.08■■□□□ 1.13
PFDN4-204ENST00000487129 NUDT16Q96DE0 195 aaKnown RBP22.08■■□□□ 1.13
PFDN4-204ENST00000487129 USP35Q9P2H5 1018 aa22.08■■□□□ 1.13
PFDN4-204ENST00000487129 NUTM2GQ5VZR2 741 aa22.07■■□□□ 1.12
PFDN4-204ENST00000487129 YY1P25490 414 aa22.06■■□□□ 1.12
PFDN4-204ENST00000487129 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
PFDN4-204ENST00000487129 CPDO75976 1380 aa22.05■■□□□ 1.12
PFDN4-204ENST00000487129 USP19O94966 1318 aa22.04■■□□□ 1.12
PFDN4-204ENST00000487129 PDE3BQ13370 1112 aa22.03■■□□□ 1.12
PFDN4-204ENST00000487129 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
PFDN4-204ENST00000487129 DCAF11Q8TEB1 546 aa22.03■■□□□ 1.12
PFDN4-204ENST00000487129 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
PFDN4-204ENST00000487129 PEAK1Q9H792 1746 aa22.02■■□□□ 1.12
PFDN4-204ENST00000487129 PARP4Q9UKK3 1724 aaKnown RBP22.02■■□□□ 1.12
PFDN4-204ENST00000487129 ACEP12821 1306 aa22.02■■□□□ 1.12
PFDN4-204ENST00000487129 NBPF8Q3BBV2 869 aa22.01■■□□□ 1.11
PFDN4-204ENST00000487129 RAB3GAP2Q9H2M9 1393 aa22■■□□□ 1.11
PFDN4-204ENST00000487129 NBPF14Q5TI25 921 aa22■■□□□ 1.11
PFDN4-204ENST00000487129 CDK19Q9BWU1 502 aa22■■□□□ 1.11
PFDN4-204ENST00000487129 COL5A2P05997 1499 aaPredicted RBP22■■□□□ 1.11
PFDN4-204ENST00000487129 NINLQ9Y2I6 1382 aa21.99■■□□□ 1.11
PFDN4-204ENST00000487129 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
PFDN4-204ENST00000487129 EVA1CP58658 441 aa21.99■■□□□ 1.11
PFDN4-204ENST00000487129 SPON1Q9HCB6 807 aa21.99■■□□□ 1.11
PFDN4-204ENST00000487129 KCNQ2O43526 872 aa21.98■■□□□ 1.11
PFDN4-204ENST00000487129 THRAP3Q9Y2W1 955 aaKnown RBP21.98■■□□□ 1.11
PFDN4-204ENST00000487129 RGPD3A6NKT7 1758 aaPredicted RBP21.97■■□□□ 1.11
PFDN4-204ENST00000487129 RGPD4Q7Z3J3 1758 aa21.97■■□□□ 1.11
PFDN4-204ENST00000487129 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
PFDN4-204ENST00000487129 CCDC61Q9Y6R9 512 aa21.97■■□□□ 1.11
PFDN4-204ENST00000487129 CASZ1Q86V15 1759 aa21.96■■□□□ 1.11
PFDN4-204ENST00000487129 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
PFDN4-204ENST00000487129 LRRC37A3O60309 1634 aa21.95■■□□□ 1.1
PFDN4-204ENST00000487129 ABTB2Q8N961 1025 aa21.94■■□□□ 1.1
PFDN4-204ENST00000487129 OVOS2A0A0G2JMS6 1433 aa21.94■■□□□ 1.1
PFDN4-204ENST00000487129 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
PFDN4-204ENST00000487129 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
PFDN4-204ENST00000487129 GCP02774 474 aa21.93■■□□□ 1.1
PFDN4-204ENST00000487129 CRB1P82279 1406 aa21.93■■□□□ 1.1
PFDN4-204ENST00000487129 SBF2Q86WG5 1849 aa21.92■■□□□ 1.1
PFDN4-204ENST00000487129 PTF1AQ7RTS3 328 aa21.92■■□□□ 1.1
PFDN4-204ENST00000487129 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
PFDN4-204ENST00000487129 PLSCR1O15162 318 aa21.91■■□□□ 1.1
PFDN4-204ENST00000487129 PDGFDQ9GZP0 370 aaPredicted RBP21.91■■□□□ 1.1
PFDN4-204ENST00000487129 C11orf95C9JLR9 678 aaPredicted RBP21.89■■□□□ 1.09
PFDN4-204ENST00000487129 PROM2Q8N271 834 aa21.89■■□□□ 1.09
PFDN4-204ENST00000487129 SLIT3O75094 1523 aa21.89■■□□□ 1.09
PFDN4-204ENST00000487129 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
PFDN4-204ENST00000487129 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
PFDN4-204ENST00000487129 AATKQ6ZMQ8 1374 aa21.87■■□□□ 1.09
PFDN4-204ENST00000487129 COL18A1P39060 1754 aa21.87■■□□□ 1.09
PFDN4-204ENST00000487129 BCL9O00512 1426 aa21.86■■□□□ 1.09
PFDN4-204ENST00000487129 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
PFDN4-204ENST00000487129 PTGER2P43116 358 aa21.85■■□□□ 1.09
PFDN4-204ENST00000487129 UTRNP46939 3433 aa21.85■■□□□ 1.09
PFDN4-204ENST00000487129 MYOM1P52179 1685 aa21.85■■□□□ 1.09
PFDN4-204ENST00000487129 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
PFDN4-204ENST00000487129 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
PFDN4-204ENST00000487129 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
PFDN4-204ENST00000487129 USP6P35125 1406 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms