RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
HMGN1-216ENST00000486741 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.23
HMGN1-216ENST00000486741 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
HMGN1-216ENST00000486741 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
HMGN1-216ENST00000486741 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
HMGN1-216ENST00000486741 ATP10AO60312 1499 aa16.44■□□□□ 0.22
HMGN1-216ENST00000486741 C22orf23Q9BZE7 217 aa16.44■□□□□ 0.22
HMGN1-216ENST00000486741 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-216ENST00000486741 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
HMGN1-216ENST00000486741 NLRP2Q9NX02 1062 aa16.43■□□□□ 0.22
HMGN1-216ENST00000486741 TRIM27P14373 513 aa16.43■□□□□ 0.22
HMGN1-216ENST00000486741 NPATQ14207 1427 aa16.42■□□□□ 0.22
HMGN1-216ENST00000486741 PROSER2Q86WR7 435 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-216ENST00000486741 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
HMGN1-216ENST00000486741 ANKRD36BQ8N2N9 1353 aa16.42■□□□□ 0.22
HMGN1-216ENST00000486741 AIMP1Q12904 312 aaKnown RBP16.42■□□□□ 0.22
HMGN1-216ENST00000486741 FGD1P98174 961 aa16.42■□□□□ 0.22
HMGN1-216ENST00000486741 MCCP23508 829 aa16.41■□□□□ 0.22
HMGN1-216ENST00000486741 KIAA1211Q6ZU35 1233 aa16.41■□□□□ 0.22
HMGN1-216ENST00000486741 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-216ENST00000486741 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
HMGN1-216ENST00000486741 KDM5CP41229 1560 aa16.41■□□□□ 0.22
HMGN1-216ENST00000486741 MAGI2Q86UL8 1455 aa16.41■□□□□ 0.22
HMGN1-216ENST00000486741 A0A1W2PP64 1363 aa16.41■□□□□ 0.22
HMGN1-216ENST00000486741 RLBP1P12271 317 aa16.4■□□□□ 0.22
HMGN1-216ENST00000486741 NFKBIBQ15653 356 aa16.4■□□□□ 0.22
HMGN1-216ENST00000486741 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
HMGN1-216ENST00000486741 ACEP12821 1306 aa16.4■□□□□ 0.22
HMGN1-216ENST00000486741 YEATS2Q9ULM3 1422 aa16.4■□□□□ 0.22
HMGN1-216ENST00000486741 POLKQ9UBT6 870 aa16.4■□□□□ 0.22
HMGN1-216ENST00000486741 PREX2Q70Z35 1606 aa16.39■□□□□ 0.22
HMGN1-216ENST00000486741 PCDHB15Q9Y5E8 787 aa16.39■□□□□ 0.22
HMGN1-216ENST00000486741 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-216ENST00000486741 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-216ENST00000486741 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-216ENST00000486741 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
HMGN1-216ENST00000486741 AEBP1Q8IUX7 1158 aa16.39■□□□□ 0.21
HMGN1-216ENST00000486741 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-216ENST00000486741 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
HMGN1-216ENST00000486741 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
HMGN1-216ENST00000486741 FOXO3O43524 673 aa16.37■□□□□ 0.21
HMGN1-216ENST00000486741 ZCCHC11Q5TAX3 1644 aaKnown RBP16.37■□□□□ 0.21
HMGN1-216ENST00000486741 ATF3P18847 181 aa16.37■□□□□ 0.21
HMGN1-216ENST00000486741 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
HMGN1-216ENST00000486741 AAMPQ13685 434 aa16.37■□□□□ 0.21
HMGN1-216ENST00000486741 POGZQ7Z3K3 1410 aa16.37■□□□□ 0.21
HMGN1-216ENST00000486741 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-216ENST00000486741 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
HMGN1-216ENST00000486741 POLR3AO14802 1390 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-216ENST00000486741 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
HMGN1-216ENST00000486741 ABCC1P33527 1531 aa16.36■□□□□ 0.21
HMGN1-216ENST00000486741 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-216ENST00000486741 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
HMGN1-216ENST00000486741 TNRQ92752 1358 aa16.35■□□□□ 0.21
HMGN1-216ENST00000486741 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
HMGN1-216ENST00000486741 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
HMGN1-216ENST00000486741 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
HMGN1-216ENST00000486741 F6X3S4 739 aa16.35■□□□□ 0.21
HMGN1-216ENST00000486741 HDGFL1Q5TGJ6 251 aa16.34■□□□□ 0.21
HMGN1-216ENST00000486741 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
HMGN1-216ENST00000486741 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
HMGN1-216ENST00000486741 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
HMGN1-216ENST00000486741 CFAP44Q96MT7 982 aa16.33■□□□□ 0.21
HMGN1-216ENST00000486741 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.21
HMGN1-216ENST00000486741 GSE1Q14687 1217 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 KRT24Q2M2I5 525 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
HMGN1-216ENST00000486741 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 PTPRTO14522 1441 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-216ENST00000486741 ANO2Q9NQ90 1003 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 NSD2O96028 1365 aa16.33■□□□□ 0.2
HMGN1-216ENST00000486741 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
HMGN1-216ENST00000486741 UBTFL1P0CB47 393 aaPredicted RBP16.32■□□□□ 0.2
HMGN1-216ENST00000486741 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
HMGN1-216ENST00000486741 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
HMGN1-216ENST00000486741 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
HMGN1-216ENST00000486741 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
HMGN1-216ENST00000486741 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
HMGN1-216ENST00000486741 EVA1CP58658 441 aa16.31■□□□□ 0.2
HMGN1-216ENST00000486741 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
HMGN1-216ENST00000486741 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
HMGN1-216ENST00000486741 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
HMGN1-216ENST00000486741 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
HMGN1-216ENST00000486741 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
HMGN1-216ENST00000486741 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
HMGN1-216ENST00000486741 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-216ENST00000486741 ST18O60284 1047 aa16.3■□□□□ 0.2
HMGN1-216ENST00000486741 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
HMGN1-216ENST00000486741 CDC42BPBQ9Y5S2 1711 aa16.29■□□□□ 0.2
HMGN1-216ENST00000486741 PHF8Q9UPP1 1060 aa16.29■□□□□ 0.2
HMGN1-216ENST00000486741 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
HMGN1-216ENST00000486741 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
HMGN1-216ENST00000486741 NPHP1O15259 732 aa16.28■□□□□ 0.2
HMGN1-216ENST00000486741 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
HMGN1-216ENST00000486741 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
HMGN1-216ENST00000486741 CDC45O75419 566 aa16.27■□□□□ 0.2
HMGN1-216ENST00000486741 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
HMGN1-216ENST00000486741 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms