RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
APTX-228ENST00000486724 KIF1BO60333 1816 aa12.91□□□□□ -0.34
APTX-228ENST00000486724 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
APTX-228ENST00000486724 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
APTX-228ENST00000486724 NUP155O75694 1391 aa12.91□□□□□ -0.34
APTX-228ENST00000486724 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
APTX-228ENST00000486724 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
APTX-228ENST00000486724 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
APTX-228ENST00000486724 TECPR2O15040 1411 aa12.89□□□□□ -0.35
APTX-228ENST00000486724 HSPA6P17066 643 aa12.89□□□□□ -0.35
APTX-228ENST00000486724 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
APTX-228ENST00000486724 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
APTX-228ENST00000486724 MAP3K5Q99683 1374 aa12.88□□□□□ -0.35
APTX-228ENST00000486724 RGPD8O14715 1765 aaPredicted RBP12.88□□□□□ -0.35
APTX-228ENST00000486724 GPR162Q16538 588 aa12.87□□□□□ -0.35
APTX-228ENST00000486724 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
APTX-228ENST00000486724 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
APTX-228ENST00000486724 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
APTX-228ENST00000486724 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
APTX-228ENST00000486724 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
APTX-228ENST00000486724 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
APTX-228ENST00000486724 C11orf95C9JLR9 678 aaPredicted RBP12.85□□□□□ -0.35
APTX-228ENST00000486724 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
APTX-228ENST00000486724 PLSCR1O15162 318 aa12.84□□□□□ -0.35
APTX-228ENST00000486724 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
APTX-228ENST00000486724 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
APTX-228ENST00000486724 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
APTX-228ENST00000486724 PPLO60437 1756 aa12.84□□□□□ -0.35
APTX-228ENST00000486724 PLEKHH1Q9ULM0 1364 aa12.83□□□□□ -0.36
APTX-228ENST00000486724 CAPN15O75808 1086 aa12.83□□□□□ -0.36
APTX-228ENST00000486724 SLC34A2O95436 690 aa12.83□□□□□ -0.36
APTX-228ENST00000486724 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
APTX-228ENST00000486724 ARXQ96QS3 562 aa12.83□□□□□ -0.36
APTX-228ENST00000486724 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
APTX-228ENST00000486724 STK26Q9P289 416 aa12.82□□□□□ -0.36
APTX-228ENST00000486724 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
APTX-228ENST00000486724 RPGRIP1LQ68CZ1 1315 aa12.82□□□□□ -0.36
APTX-228ENST00000486724 OVOS2A0A0G2JMS6 1433 aa12.81□□□□□ -0.36
APTX-228ENST00000486724 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
APTX-228ENST00000486724 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
APTX-228ENST00000486724 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
APTX-228ENST00000486724 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
APTX-228ENST00000486724 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
APTX-228ENST00000486724 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
APTX-228ENST00000486724 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
APTX-228ENST00000486724 KIAA0232Q92628 1395 aa12.8□□□□□ -0.36
APTX-228ENST00000486724 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
APTX-228ENST00000486724 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
APTX-228ENST00000486724 SBF2Q86WG5 1849 aa12.79□□□□□ -0.36
APTX-228ENST00000486724 PRELPP51888 382 aa12.78□□□□□ -0.36
APTX-228ENST00000486724 GPRASP1Q5JY77 1395 aa12.78□□□□□ -0.36
APTX-228ENST00000486724 SLC15A2Q16348 729 aa12.77□□□□□ -0.37
APTX-228ENST00000486724 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
APTX-228ENST00000486724 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
APTX-228ENST00000486724 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
APTX-228ENST00000486724 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.37
APTX-228ENST00000486724 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
APTX-228ENST00000486724 APLP2Q06481 763 aa12.76□□□□□ -0.37
APTX-228ENST00000486724 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
APTX-228ENST00000486724 EVA1CP58658 441 aa12.75□□□□□ -0.37
APTX-228ENST00000486724 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
APTX-228ENST00000486724 DHX57Q6P158 1386 aaKnown RBP12.75□□□□□ -0.37
APTX-228ENST00000486724 PROM2Q8N271 834 aa12.75□□□□□ -0.37
APTX-228ENST00000486724 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
APTX-228ENST00000486724 ATP7BP35670 1465 aa12.74□□□□□ -0.37
APTX-228ENST00000486724 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
APTX-228ENST00000486724 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
APTX-228ENST00000486724 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
APTX-228ENST00000486724 APLP1P51693 650 aa12.73□□□□□ -0.37
APTX-228ENST00000486724 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
APTX-228ENST00000486724 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
APTX-228ENST00000486724 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
APTX-228ENST00000486724 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
APTX-228ENST00000486724 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
APTX-228ENST00000486724 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
APTX-228ENST00000486724 TMEM132EQ6IEE7 984 aa12.71□□□□□ -0.37
APTX-228ENST00000486724 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
APTX-228ENST00000486724 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
APTX-228ENST00000486724 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
APTX-228ENST00000486724 ADGRF5Q8IZF2 1346 aa12.7□□□□□ -0.38
APTX-228ENST00000486724 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
APTX-228ENST00000486724 PTF1AQ7RTS3 328 aa12.7□□□□□ -0.38
APTX-228ENST00000486724 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
APTX-228ENST00000486724 ADCY9O60503 1353 aa12.69□□□□□ -0.38
APTX-228ENST00000486724 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
APTX-228ENST00000486724 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
APTX-228ENST00000486724 PCNTO95613 3336 aa12.69□□□□□ -0.38
APTX-228ENST00000486724 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
APTX-228ENST00000486724 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
APTX-228ENST00000486724 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
APTX-228ENST00000486724 BCL9O00512 1426 aa12.68□□□□□ -0.38
APTX-228ENST00000486724 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
APTX-228ENST00000486724 POLD1P28340 1107 aa12.67□□□□□ -0.38
APTX-228ENST00000486724 DDB1Q16531 1140 aa12.67□□□□□ -0.38
APTX-228ENST00000486724 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
APTX-228ENST00000486724 PIK3C2GO75747 1445 aa12.67□□□□□ -0.38
APTX-228ENST00000486724 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
APTX-228ENST00000486724 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
APTX-228ENST00000486724 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
APTX-228ENST00000486724 CRB1P82279 1406 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms