RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 FCF1Q9Y324 198 aaKnown RBP11.83□□□□□ -0.52
RTN4-214ENST00000486085 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
RTN4-214ENST00000486085 FKBPLQ9UIM3 349 aa11.81□□□□□ -0.52
RTN4-214ENST00000486085 GGCXP38435 758 aa11.79□□□□□ -0.52
RTN4-214ENST00000486085 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
RTN4-214ENST00000486085 WASHC4Q2M389 1173 aa11.78□□□□□ -0.52
RTN4-214ENST00000486085 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
RTN4-214ENST00000486085 UNC93B1Q9H1C4 597 aa11.78□□□□□ -0.52
RTN4-214ENST00000486085 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
RTN4-214ENST00000486085 VAC14Q08AM6 782 aa11.77□□□□□ -0.53
RTN4-214ENST00000486085 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
RTN4-214ENST00000486085 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
RTN4-214ENST00000486085 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
RTN4-214ENST00000486085 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
RTN4-214ENST00000486085 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
RTN4-214ENST00000486085 BAP1Q92560 729 aa11.73□□□□□ -0.53
RTN4-214ENST00000486085 ZC3H4Q9UPT8 1303 aaKnown RBP11.73□□□□□ -0.53
RTN4-214ENST00000486085 ZBTB24O43167 697 aaPredicted RBP11.72□□□□□ -0.53
RTN4-214ENST00000486085 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
RTN4-214ENST00000486085 ZBBXA8MT70 800 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 FBXO45P0C2W1 286 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 NR1H3Q13133 447 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 LINC01559Q495D7 138 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 PLA2G2CQ5R387 149 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.53
RTN4-214ENST00000486085 ARID3AQ99856 593 aa11.71□□□□□ -0.53
RTN4-214ENST00000486085 PTK2Q05397 1052 aa11.7□□□□□ -0.54
RTN4-214ENST00000486085 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
RTN4-214ENST00000486085 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
RTN4-214ENST00000486085 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
RTN4-214ENST00000486085 GLMNQ92990 594 aa11.68□□□□□ -0.54
RTN4-214ENST00000486085 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
RTN4-214ENST00000486085 ARHGAP9Q9BRR9 750 aa11.67□□□□□ -0.54
RTN4-214ENST00000486085 GPSM3Q9Y4H4 160 aa11.67□□□□□ -0.54
RTN4-214ENST00000486085 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
RTN4-214ENST00000486085 AGERQ15109 404 aa11.66□□□□□ -0.54
RTN4-214ENST00000486085 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
RTN4-214ENST00000486085 ZNF511Q8NB15 262 aa11.66□□□□□ -0.54
RTN4-214ENST00000486085 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
RTN4-214ENST00000486085 FOXJ1Q92949 421 aa11.66□□□□□ -0.54
RTN4-214ENST00000486085 SEMA3FQ13275 785 aa11.65□□□□□ -0.54
RTN4-214ENST00000486085 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
RTN4-214ENST00000486085 OCSTAMPQ9BR26 566 aa11.65□□□□□ -0.54
RTN4-214ENST00000486085 MAGEB6P1A0A0J9YX57 407 aa11.64□□□□□ -0.55
RTN4-214ENST00000486085 TRIM32Q13049 653 aa11.64□□□□□ -0.55
RTN4-214ENST00000486085 ZBTB33Q86T24 672 aa11.64□□□□□ -0.55
RTN4-214ENST00000486085 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
RTN4-214ENST00000486085 CARD14Q9BXL6 1004 aa11.64□□□□□ -0.55
RTN4-214ENST00000486085 ALG2Q9H553 416 aa11.64□□□□□ -0.55
RTN4-214ENST00000486085 SH3BP2P78314 561 aa11.63□□□□□ -0.55
RTN4-214ENST00000486085 BPHLQ86WA6 291 aaPredicted RBP11.63□□□□□ -0.55
RTN4-214ENST00000486085 ADAM32Q8TC27 787 aa11.63□□□□□ -0.55
RTN4-214ENST00000486085 SOX11P35716 441 aa11.62□□□□□ -0.55
RTN4-214ENST00000486085 RPIAP49247 311 aa11.62□□□□□ -0.55
RTN4-214ENST00000486085 LIAT1Q6ZQX7 453 aa11.62□□□□□ -0.55
RTN4-214ENST00000486085 SERPINA10Q9UK55 444 aa11.61□□□□□ -0.55
RTN4-214ENST00000486085 PCDHB9Q9Y5E1 797 aa11.61□□□□□ -0.55
RTN4-214ENST00000486085 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
RTN4-214ENST00000486085 C4orf48Q5BLP8 95 aa11.6□□□□□ -0.55
RTN4-214ENST00000486085 SH3RF1Q7Z6J0 888 aa11.6□□□□□ -0.55
RTN4-214ENST00000486085 SKOR1P84550 965 aa11.59□□□□□ -0.55
RTN4-214ENST00000486085 EMID1Q96A84 441 aaPredicted RBP11.59□□□□□ -0.55
RTN4-214ENST00000486085 A0A0G2JS52 829 aa11.58□□□□□ -0.56
RTN4-214ENST00000486085 SLC19A1P41440 591 aa11.58□□□□□ -0.56
RTN4-214ENST00000486085 WNT7BP56706 349 aa11.57□□□□□ -0.56
RTN4-214ENST00000486085 DZIP3Q86Y13 1208 aaKnown RBP11.57□□□□□ -0.56
RTN4-214ENST00000486085 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
RTN4-214ENST00000486085 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
RTN4-214ENST00000486085 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
RTN4-214ENST00000486085 CEP126Q9P2H0 1117 aa11.54□□□□□ -0.56
RTN4-214ENST00000486085 RC3H1Q5TC82 1133 aaKnown RBP11.53□□□□□ -0.56
RTN4-214ENST00000486085 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
RTN4-214ENST00000486085 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
RTN4-214ENST00000486085 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
RTN4-214ENST00000486085 UCN2Q96RP3 112 aa11.52□□□□□ -0.57
RTN4-214ENST00000486085 C1QTNF2Q9BXJ5 285 aa11.52□□□□□ -0.57
RTN4-214ENST00000486085 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
RTN4-214ENST00000486085 FAM174AQ8TBP5 190 aa11.51□□□□□ -0.57
RTN4-214ENST00000486085 TFIP11Q9UBB9 837 aaKnown RBP11.51□□□□□ -0.57
RTN4-214ENST00000486085 PIK3CDO00329 1044 aa11.5□□□□□ -0.57
RTN4-214ENST00000486085 SLFNL1Q499Z3 407 aa11.5□□□□□ -0.57
RTN4-214ENST00000486085 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
RTN4-214ENST00000486085 PRKD2Q9BZL6 878 aa11.5□□□□□ -0.57
RTN4-214ENST00000486085 PALM3A6NDB9 673 aaPredicted RBP11.49□□□□□ -0.57
RTN4-214ENST00000486085 RFX1P22670 979 aa11.49□□□□□ -0.57
RTN4-214ENST00000486085 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
RTN4-214ENST00000486085 TRMT44Q8IYL2 757 aaKnown RBP11.49□□□□□ -0.57
RTN4-214ENST00000486085 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
RTN4-214ENST00000486085 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
RTN4-214ENST00000486085 ZNF697Q5TEC3 545 aa11.48□□□□□ -0.57
RTN4-214ENST00000486085 SKIP12755 728 aa11.47□□□□□ -0.57
RTN4-214ENST00000486085 RNF135Q8IUD6 432 aa11.47□□□□□ -0.57
RTN4-214ENST00000486085 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
RTN4-214ENST00000486085 CFAP70Q5T0N1 1121 aa11.46□□□□□ -0.57
RTN4-214ENST00000486085 ZNF598Q86UK7 904 aaKnown RBP11.46□□□□□ -0.57
RTN4-214ENST00000486085 WNT7AO00755 349 aa11.45□□□□□ -0.58
RTN4-214ENST00000486085 ATP9BO43861 1147 aa11.45□□□□□ -0.58
RTN4-214ENST00000486085 FOXC1Q12948 553 aa11.45□□□□□ -0.58
RTN4-214ENST00000486085 VASH1Q7L8A9 365 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms