RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 NLRP13Q86W25 1043 aa21.37■■□□□ 1.01
HDHD3-203ENST00000485934 USP6P35125 1406 aa21.37■■□□□ 1.01
HDHD3-203ENST00000485934 KTN1Q86UP2 1357 aaKnown RBP21.36■■□□□ 1.01
HDHD3-203ENST00000485934 TTC21AQ8NDW8 1320 aa21.36■■□□□ 1.01
HDHD3-203ENST00000485934 TOPAZ1Q8N9V7 1692 aa21.36■■□□□ 1.01
HDHD3-203ENST00000485934 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
HDHD3-203ENST00000485934 ADAMTS2O95450 1211 aa21.34■■□□□ 1.01
HDHD3-203ENST00000485934 NGLY1Q96IV0 654 aa21.34■■□□□ 1.01
HDHD3-203ENST00000485934 MED1Q15648 1581 aaPredicted RBP21.34■■□□□ 1.01
HDHD3-203ENST00000485934 ZNF772Q68DY9 489 aaPredicted RBP21.33■■□□□ 1.01
HDHD3-203ENST00000485934 TTC21BQ7Z4L5 1316 aa21.32■■□□□ 1
HDHD3-203ENST00000485934 NLRP6P59044 892 aa21.32■■□□□ 1
HDHD3-203ENST00000485934 C8orf37Q96NL8 207 aa21.31■■□□□ 1
HDHD3-203ENST00000485934 COL22A1Q8NFW1 1626 aaPredicted RBP21.3■■□□□ 1
HDHD3-203ENST00000485934 POLR3GLQ9BT43 218 aa21.3■■□□□ 1
HDHD3-203ENST00000485934 ANKRD36BQ8N2N9 1353 aa21.3■■□□□ 1
HDHD3-203ENST00000485934 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
HDHD3-203ENST00000485934 SSH2Q76I76 1423 aa21.29■■□□□ 1
HDHD3-203ENST00000485934 PLEKHG5O94827 1062 aa21.28■■□□□ 1
HDHD3-203ENST00000485934 LRP6O75581 1613 aa21.28■■□□□ 1
HDHD3-203ENST00000485934 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
HDHD3-203ENST00000485934 NUTM2GQ5VZR2 741 aa21.27■■□□□ 1
HDHD3-203ENST00000485934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.27■■□□□ 1
HDHD3-203ENST00000485934 KCNH5Q8NCM2 988 aa21.27■■□□□ 1
HDHD3-203ENST00000485934 A0A1W2PP64 1363 aa21.26■□□□□ 0.99
HDHD3-203ENST00000485934 FNBP4Q8N3X1 1017 aaPredicted RBP21.26■□□□□ 0.99
HDHD3-203ENST00000485934 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
HDHD3-203ENST00000485934 AFF2P51816 1311 aa21.25■□□□□ 0.99
HDHD3-203ENST00000485934 GCP02774 474 aa21.24■□□□□ 0.99
HDHD3-203ENST00000485934 USP19O94966 1318 aa21.24■□□□□ 0.99
HDHD3-203ENST00000485934 USP21Q9UK80 565 aa21.23■□□□□ 0.99
HDHD3-203ENST00000485934 CD163L1Q9NR16 1453 aa21.23■□□□□ 0.99
HDHD3-203ENST00000485934 ALS2Q96Q42 1657 aa21.22■□□□□ 0.99
HDHD3-203ENST00000485934 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
HDHD3-203ENST00000485934 USP31Q70CQ4 1352 aa21.21■□□□□ 0.99
HDHD3-203ENST00000485934 FAM83GA6ND36 823 aa21.2■□□□□ 0.98
HDHD3-203ENST00000485934 COG3Q96JB2 828 aa21.2■□□□□ 0.98
HDHD3-203ENST00000485934 RGS17Q9UGC6 210 aaPredicted RBP21.2■□□□□ 0.98
HDHD3-203ENST00000485934 TRPC5Q9UL62 973 aaPredicted RBP21.2■□□□□ 0.98
HDHD3-203ENST00000485934 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
HDHD3-203ENST00000485934 ZC3H6P61129 1189 aaKnown RBP21.18■□□□□ 0.98
HDHD3-203ENST00000485934 NME9Q86XW9 330 aa21.18■□□□□ 0.98
HDHD3-203ENST00000485934 UNC5CLQ8IV45 518 aa21.18■□□□□ 0.98
HDHD3-203ENST00000485934 QTRT2Q9H974 415 aaKnown RBP21.18■□□□□ 0.98
HDHD3-203ENST00000485934 KIF7Q2M1P5 1343 aa21.18■□□□□ 0.98
HDHD3-203ENST00000485934 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
HDHD3-203ENST00000485934 CPDO75976 1380 aa21.17■□□□□ 0.98
HDHD3-203ENST00000485934 AKAP12Q02952 1782 aa21.16■□□□□ 0.98
HDHD3-203ENST00000485934 RXRBP28702 533 aa21.16■□□□□ 0.98
HDHD3-203ENST00000485934 PANK3Q9H999 370 aa21.16■□□□□ 0.98
HDHD3-203ENST00000485934 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
HDHD3-203ENST00000485934 CARD14Q9BXL6 1004 aa21.15■□□□□ 0.98
HDHD3-203ENST00000485934 FYB1O15117 783 aa21.14■□□□□ 0.97
HDHD3-203ENST00000485934 BTG4Q9NY30 223 aa21.14■□□□□ 0.97
HDHD3-203ENST00000485934 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
HDHD3-203ENST00000485934 EVA1CP58658 441 aa21.13■□□□□ 0.97
HDHD3-203ENST00000485934 RBM6P78332 1123 aaKnown RBP21.13■□□□□ 0.97
HDHD3-203ENST00000485934 POTEAQ6S8J7 498 aa21.13■□□□□ 0.97
HDHD3-203ENST00000485934 KNSTRNQ9Y448 316 aa21.13■□□□□ 0.97
HDHD3-203ENST00000485934 SLIT2O94813 1529 aa21.12■□□□□ 0.97
HDHD3-203ENST00000485934 CCDC7Q96M83 1385 aa21.11■□□□□ 0.97
HDHD3-203ENST00000485934 ARHGEF25Q86VW2 580 aa21.11■□□□□ 0.97
HDHD3-203ENST00000485934 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
HDHD3-203ENST00000485934 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
HDHD3-203ENST00000485934 SOX12O15370 315 aa21.1■□□□□ 0.97
HDHD3-203ENST00000485934 CHRNA2Q15822 529 aa21.1■□□□□ 0.97
HDHD3-203ENST00000485934 VPS72Q15906 364 aa21.1■□□□□ 0.97
HDHD3-203ENST00000485934 ZRANB1Q9UGI0 708 aa21.1■□□□□ 0.97
HDHD3-203ENST00000485934 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
HDHD3-203ENST00000485934 AATKQ6ZMQ8 1374 aa21.1■□□□□ 0.97
HDHD3-203ENST00000485934 SLIT3O75094 1523 aa21.09■□□□□ 0.97
HDHD3-203ENST00000485934 WASHC2AQ641Q2 1341 aa21.09■□□□□ 0.97
HDHD3-203ENST00000485934 ZBTB7CA1YPR0 619 aa21.09■□□□□ 0.97
HDHD3-203ENST00000485934 GJD4Q96KN9 370 aaPredicted RBP21.09■□□□□ 0.97
HDHD3-203ENST00000485934 GGNBP2Q9H3C7 697 aa21.09■□□□□ 0.97
HDHD3-203ENST00000485934 CCDC9Q9Y3X0 531 aaKnown RBP21.09■□□□□ 0.97
HDHD3-203ENST00000485934 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
HDHD3-203ENST00000485934 OVOS2A0A0J9YW53 1432 aa21.07■□□□□ 0.96
HDHD3-203ENST00000485934 OVOS2Q6IE36 1432 aa21.07■□□□□ 0.96
HDHD3-203ENST00000485934 NSD2O96028 1365 aa21.06■□□□□ 0.96
HDHD3-203ENST00000485934 COL14A1Q05707 1796 aaKnown RBP21.05■□□□□ 0.96
HDHD3-203ENST00000485934 ATRNO75882 1429 aa21.05■□□□□ 0.96
HDHD3-203ENST00000485934 ABCA3Q99758 1704 aa21.04■□□□□ 0.96
HDHD3-203ENST00000485934 MARF1Q9Y4F3 1742 aaKnown RBP21.04■□□□□ 0.96
HDHD3-203ENST00000485934 STRN4Q9NRL3 753 aa21.04■□□□□ 0.96
HDHD3-203ENST00000485934 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
HDHD3-203ENST00000485934 MYOM1P52179 1685 aa21.03■□□□□ 0.96
HDHD3-203ENST00000485934 CRYBG1Q9Y4K1 1723 aa21.02■□□□□ 0.96
HDHD3-203ENST00000485934 AMPHP49418 695 aa21.02■□□□□ 0.96
HDHD3-203ENST00000485934 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
HDHD3-203ENST00000485934 CSB-PGBD3P0DP91 1061 aa21■□□□□ 0.95
HDHD3-203ENST00000485934 ILDR2Q71H61 639 aa21■□□□□ 0.95
HDHD3-203ENST00000485934 IP6K1Q92551 441 aa21■□□□□ 0.95
HDHD3-203ENST00000485934 NWD2Q9ULI1 1742 aa21■□□□□ 0.95
HDHD3-203ENST00000485934 SPATA31A5Q5VU36 1347 aa21■□□□□ 0.95
HDHD3-203ENST00000485934 SPATA31A7Q8IWB4 1347 aa21■□□□□ 0.95
HDHD3-203ENST00000485934 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
HDHD3-203ENST00000485934 MORC1Q86VD1 984 aa20.99■□□□□ 0.95
HDHD3-203ENST00000485934 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
HDHD3-203ENST00000485934 USP54Q70EL1 1684 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms