RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 DXOO77932 396 aaKnown RBP7.41□□□□□ -1.22
FN1-222ENST00000485567 MMP16P51512 607 aa7.41□□□□□ -1.22
FN1-222ENST00000485567 FAM160A2Q8N612 972 aaPredicted RBP7.41□□□□□ -1.22
FN1-222ENST00000485567 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
FN1-222ENST00000485567 GPKOWQ92917 476 aaPredicted RBP eCLIP7.41□□□□□ -1.22
FN1-222ENST00000485567 SPSB2Q99619 263 aa7.41□□□□□ -1.22
FN1-222ENST00000485567 GPSM3Q9Y4H4 160 aa7.41□□□□□ -1.22
FN1-222ENST00000485567 UCN2Q96RP3 112 aa7.4□□□□□ -1.22
FN1-222ENST00000485567 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
FN1-222ENST00000485567 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
FN1-222ENST00000485567 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
FN1-222ENST00000485567 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
FN1-222ENST00000485567 CCNYL3P0C7X3 344 aa7.39□□□□□ -1.23
FN1-222ENST00000485567 RFX1P22670 979 aa7.39□□□□□ -1.23
FN1-222ENST00000485567 MCCD1P59942 119 aaPredicted RBP7.39□□□□□ -1.23
FN1-222ENST00000485567 KCNH2Q12809 1159 aa7.39□□□□□ -1.23
FN1-222ENST00000485567 MAP10Q9P2G4 905 aa7.39□□□□□ -1.23
FN1-222ENST00000485567 CTHP32929 405 aa7.38□□□□□ -1.23
FN1-222ENST00000485567 PDXDC2PQ6P474 469 aa7.38□□□□□ -1.23
FN1-222ENST00000485567 ZNF592Q92610 1267 aa7.38□□□□□ -1.23
FN1-222ENST00000485567 NUDT12Q9BQG2 462 aa7.38□□□□□ -1.23
FN1-222ENST00000485567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.37□□□□□ -1.23
FN1-222ENST00000485567 ATP9BO43861 1147 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 ZPR1O75312 459 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 ADH1BP00325 375 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 LMOD1P29536 600 aaPredicted RBP7.37□□□□□ -1.23
FN1-222ENST00000485567 COPS2P61201 443 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 PTK2Q05397 1052 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 NFATC2IPQ8NCF5 419 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 USTQ9Y2C2 406 aa7.37□□□□□ -1.23
FN1-222ENST00000485567 MAFBQ9Y5Q3 323 aaPredicted RBP7.37□□□□□ -1.23
FN1-222ENST00000485567 KCTD12Q96CX2 325 aaKnown RBP7.36□□□□□ -1.23
FN1-222ENST00000485567 MYT1LQ9UL68 1186 aa7.36□□□□□ -1.23
FN1-222ENST00000485567 ATG7O95352 703 aa7.35□□□□□ -1.23
FN1-222ENST00000485567 CSB-PGBD3P0DP91 1061 aa7.35□□□□□ -1.23
FN1-222ENST00000485567 NBPF14Q5TI25 921 aa7.35□□□□□ -1.23
FN1-222ENST00000485567 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
FN1-222ENST00000485567 MTRQ99707 1265 aa7.34□□□□□ -1.23
FN1-222ENST00000485567 IL21Q9HBE4 155 aa7.34□□□□□ -1.23
FN1-222ENST00000485567 TJAP1Q5JTD0 557 aa7.33□□□□□ -1.24
FN1-222ENST00000485567 PRDM9Q9NQV7 894 aa7.33□□□□□ -1.24
FN1-222ENST00000485567 POTEMA6NI47 508 aa7.32□□□□□ -1.24
FN1-222ENST00000485567 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
FN1-222ENST00000485567 AEBP1Q8IUX7 1158 aa7.32□□□□□ -1.24
FN1-222ENST00000485567 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
FN1-222ENST00000485567 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
FN1-222ENST00000485567 CEP126Q9P2H0 1117 aa7.32□□□□□ -1.24
FN1-222ENST00000485567 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
FN1-222ENST00000485567 KANK4Q5T7N3 995 aaPredicted RBP7.31□□□□□ -1.24
FN1-222ENST00000485567 OCSTAMPQ9BR26 566 aa7.31□□□□□ -1.24
FN1-222ENST00000485567 SLC6A16Q9GZN6 736 aa7.31□□□□□ -1.24
FN1-222ENST00000485567 UNC93B1Q9H1C4 597 aa7.31□□□□□ -1.24
FN1-222ENST00000485567 TLL1O43897 1013 aa7.3□□□□□ -1.24
FN1-222ENST00000485567 BRD1O95696 1058 aa7.3□□□□□ -1.24
FN1-222ENST00000485567 SKIP12755 728 aa7.3□□□□□ -1.24
FN1-222ENST00000485567 ELOAQ14241 798 aaKnown RBP7.3□□□□□ -1.24
FN1-222ENST00000485567 PTCRAQ6ISU1 281 aaPredicted RBP7.3□□□□□ -1.24
FN1-222ENST00000485567 SH3BP5LQ7L8J4 393 aa7.3□□□□□ -1.24
FN1-222ENST00000485567 PHTF2Q8N3S3 785 aa7.3□□□□□ -1.24
FN1-222ENST00000485567 ARHGAP9Q9BRR9 750 aa7.3□□□□□ -1.24
FN1-222ENST00000485567 PIK3CDO00329 1044 aa7.29□□□□□ -1.24
FN1-222ENST00000485567 ADAM32Q8TC27 787 aa7.29□□□□□ -1.24
FN1-222ENST00000485567 ZNF516Q92618 1163 aa7.29□□□□□ -1.24
FN1-222ENST00000485567 CHIC2Q9UKJ5 165 aa7.29□□□□□ -1.24
FN1-222ENST00000485567 PTPN5P54829 565 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 KCNA1Q09470 495 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 SLFNL1Q499Z3 407 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 CDCA8Q53HL2 280 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 CCDC24Q8N4L8 307 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 CCDC9Q9Y3X0 531 aaKnown RBP7.28□□□□□ -1.24
FN1-222ENST00000485567 PCDHB9Q9Y5E1 797 aa7.28□□□□□ -1.24
FN1-222ENST00000485567 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 TMEM88BA6NKF7 163 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 SH3RF1Q7Z6J0 888 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 ZBTB33Q86T24 672 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 FAM174AQ8TBP5 190 aa7.27□□□□□ -1.25
FN1-222ENST00000485567 BPHLQ86WA6 291 aaPredicted RBP7.26□□□□□ -1.25
FN1-222ENST00000485567 RNF135Q8IUD6 432 aa7.26□□□□□ -1.25
FN1-222ENST00000485567 CDAN1Q8IWY9 1227 aa7.26□□□□□ -1.25
FN1-222ENST00000485567 FAM196BA6NMK8 535 aa7.25□□□□□ -1.25
FN1-222ENST00000485567 DZIP3Q86Y13 1208 aaKnown RBP7.25□□□□□ -1.25
FN1-222ENST00000485567 PLPP7Q8NBV4 271 aa7.25□□□□□ -1.25
FN1-222ENST00000485567 BAP1Q92560 729 aa7.25□□□□□ -1.25
FN1-222ENST00000485567 MKRN1Q9UHC7 482 aaKnown RBP7.25□□□□□ -1.25
FN1-222ENST00000485567 ATP5J2-PTCD1G3V325 749 aa7.24□□□□□ -1.25
FN1-222ENST00000485567 S1PR4O95977 384 aa7.24□□□□□ -1.25
FN1-222ENST00000485567 CCDC125Q86Z20 511 aa7.24□□□□□ -1.25
FN1-222ENST00000485567 NCOA4Q13772 614 aa7.23□□□□□ -1.25
FN1-222ENST00000485567 LARP1Q6PKG0 1096 aaKnown RBP7.23□□□□□ -1.25
FN1-222ENST00000485567 TRAF7Q6Q0C0 670 aa7.23□□□□□ -1.25
FN1-222ENST00000485567 ZNF511Q8NB15 262 aa7.23□□□□□ -1.25
FN1-222ENST00000485567 NKX2-3Q8TAU0 364 aa7.23□□□□□ -1.25
FN1-222ENST00000485567 ERFEQ4G0M1 354 aa7.22□□□□□ -1.25
FN1-222ENST00000485567 RNF20Q5VTR2 975 aa7.22□□□□□ -1.25
FN1-222ENST00000485567 B4GALNT3Q6L9W6 998 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms