RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 CADPS2Q86UW7 1296 aa17.36■□□□□ 0.37
SFMBT1-206ENST00000485494 TMEM94Q12767 1356 aa17.36■□□□□ 0.37
SFMBT1-206ENST00000485494 C14orf37Q86TY3 774 aa17.35■□□□□ 0.37
SFMBT1-206ENST00000485494 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
SFMBT1-206ENST00000485494 ACEP12821 1306 aa17.35■□□□□ 0.37
SFMBT1-206ENST00000485494 MSH6P52701 1360 aa17.35■□□□□ 0.37
SFMBT1-206ENST00000485494 SSH2Q76I76 1423 aa17.35■□□□□ 0.37
SFMBT1-206ENST00000485494 FYB1O15117 783 aa17.34■□□□□ 0.37
SFMBT1-206ENST00000485494 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
SFMBT1-206ENST00000485494 PIP4K2BP78356 416 aa17.33■□□□□ 0.36
SFMBT1-206ENST00000485494 AATKQ6ZMQ8 1374 aa17.32■□□□□ 0.36
SFMBT1-206ENST00000485494 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
SFMBT1-206ENST00000485494 ATF3P18847 181 aa17.32■□□□□ 0.36
SFMBT1-206ENST00000485494 SOCS7O14512 581 aa17.31■□□□□ 0.36
SFMBT1-206ENST00000485494 NGDNQ8NEJ9 315 aaKnown RBP17.31■□□□□ 0.36
SFMBT1-206ENST00000485494 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
SFMBT1-206ENST00000485494 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
SFMBT1-206ENST00000485494 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
SFMBT1-206ENST00000485494 HSPA1LP34931 641 aa17.3■□□□□ 0.36
SFMBT1-206ENST00000485494 C1orf167Q5SNV9 1468 aa17.3■□□□□ 0.36
SFMBT1-206ENST00000485494 MST1RQ04912 1400 aa17.3■□□□□ 0.36
SFMBT1-206ENST00000485494 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
SFMBT1-206ENST00000485494 COG3Q96JB2 828 aa17.28■□□□□ 0.36
SFMBT1-206ENST00000485494 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
SFMBT1-206ENST00000485494 PIK3C2AO00443 1686 aa17.28■□□□□ 0.36
SFMBT1-206ENST00000485494 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
SFMBT1-206ENST00000485494 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.36
SFMBT1-206ENST00000485494 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
SFMBT1-206ENST00000485494 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
SFMBT1-206ENST00000485494 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
SFMBT1-206ENST00000485494 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
SFMBT1-206ENST00000485494 SHPRHQ149N8 1683 aa17.24■□□□□ 0.35
SFMBT1-206ENST00000485494 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
SFMBT1-206ENST00000485494 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
SFMBT1-206ENST00000485494 PNPLA6Q8IY17 1366 aa17.24■□□□□ 0.35
SFMBT1-206ENST00000485494 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
SFMBT1-206ENST00000485494 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
SFMBT1-206ENST00000485494 GGNBP2Q9H3C7 697 aa17.23■□□□□ 0.35
SFMBT1-206ENST00000485494 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
SFMBT1-206ENST00000485494 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
SFMBT1-206ENST00000485494 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
SFMBT1-206ENST00000485494 PSME1Q06323 249 aa17.22■□□□□ 0.35
SFMBT1-206ENST00000485494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
SFMBT1-206ENST00000485494 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
SFMBT1-206ENST00000485494 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
SFMBT1-206ENST00000485494 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.34
SFMBT1-206ENST00000485494 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.34
SFMBT1-206ENST00000485494 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
SFMBT1-206ENST00000485494 MTHFSP49914 203 aa17.2■□□□□ 0.34
SFMBT1-206ENST00000485494 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
SFMBT1-206ENST00000485494 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
SFMBT1-206ENST00000485494 NHSL1Q5SYE7 1610 aa17.19■□□□□ 0.34
SFMBT1-206ENST00000485494 NME9Q86XW9 330 aa17.19■□□□□ 0.34
SFMBT1-206ENST00000485494 NUDCQ9Y266 331 aa17.19■□□□□ 0.34
SFMBT1-206ENST00000485494 LTN1O94822 1766 aa17.18■□□□□ 0.34
SFMBT1-206ENST00000485494 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
SFMBT1-206ENST00000485494 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
SFMBT1-206ENST00000485494 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
SFMBT1-206ENST00000485494 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
SFMBT1-206ENST00000485494 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
SFMBT1-206ENST00000485494 KCNH5Q8NCM2 988 aa17.16■□□□□ 0.34
SFMBT1-206ENST00000485494 SLIT3O75094 1523 aa17.16■□□□□ 0.34
SFMBT1-206ENST00000485494 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 ABCC6O95255 1503 aa17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SFMBT1-206ENST00000485494 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
SFMBT1-206ENST00000485494 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
SFMBT1-206ENST00000485494 PXDNQ92626 1479 aa17.13■□□□□ 0.33
SFMBT1-206ENST00000485494 NLRP6P59044 892 aa17.13■□□□□ 0.33
SFMBT1-206ENST00000485494 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.33
SFMBT1-206ENST00000485494 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
SFMBT1-206ENST00000485494 FOXO3O43524 673 aa17.12■□□□□ 0.33
SFMBT1-206ENST00000485494 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
SFMBT1-206ENST00000485494 CRYBG1Q9Y4K1 1723 aa17.12■□□□□ 0.33
SFMBT1-206ENST00000485494 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
SFMBT1-206ENST00000485494 FLT4P35916 1363 aa17.11■□□□□ 0.33
SFMBT1-206ENST00000485494 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
SFMBT1-206ENST00000485494 NFAT5O94916 1531 aa17.11■□□□□ 0.33
SFMBT1-206ENST00000485494 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
SFMBT1-206ENST00000485494 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
SFMBT1-206ENST00000485494 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
SFMBT1-206ENST00000485494 USP19O94966 1318 aa17.1■□□□□ 0.33
SFMBT1-206ENST00000485494 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
SFMBT1-206ENST00000485494 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
SFMBT1-206ENST00000485494 SOS2Q07890 1332 aaPredicted RBP17.09■□□□□ 0.33
SFMBT1-206ENST00000485494 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
SFMBT1-206ENST00000485494 PEAK1Q9H792 1746 aa17.09■□□□□ 0.33
SFMBT1-206ENST00000485494 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
SFMBT1-206ENST00000485494 FCHSD2O94868 740 aa17.07■□□□□ 0.32
SFMBT1-206ENST00000485494 ROBO1Q9Y6N7 1651 aa17.07■□□□□ 0.32
SFMBT1-206ENST00000485494 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
SFMBT1-206ENST00000485494 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
SFMBT1-206ENST00000485494 ZRANB1Q9UGI0 708 aa17.05■□□□□ 0.32
SFMBT1-206ENST00000485494 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
SFMBT1-206ENST00000485494 NEFMP07197 916 aa17.03■□□□□ 0.32
SFMBT1-206ENST00000485494 IL13P35225 146 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms