RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 ZNF692Q9BU19 519 aaPredicted RBP24.41■■□□□ 1.5
PLD3-211ENST00000485448 CABP1Q9NZU7 370 aa24.4■■□□□ 1.5
PLD3-211ENST00000485448 PPIP5K1Q6PFW1 1433 aa24.4■■□□□ 1.5
PLD3-211ENST00000485448 PUS7Q96PZ0 661 aaKnown RBP24.39■■□□□ 1.5
PLD3-211ENST00000485448 QRICH2Q9H0J4 1663 aa24.38■■□□□ 1.49
PLD3-211ENST00000485448 ATAD2Q6PL18 1390 aa24.38■■□□□ 1.49
PLD3-211ENST00000485448 CABLES1Q8TDN4 633 aa24.37■■□□□ 1.49
PLD3-211ENST00000485448 UNC5CLQ8IV45 518 aa24.35■■□□□ 1.49
PLD3-211ENST00000485448 ABTB2Q8N961 1025 aa24.35■■□□□ 1.49
PLD3-211ENST00000485448 CDK12Q9NYV4 1490 aaPredicted RBP24.35■■□□□ 1.49
PLD3-211ENST00000485448 NLRP13Q86W25 1043 aa24.34■■□□□ 1.49
PLD3-211ENST00000485448 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
PLD3-211ENST00000485448 BCL9LQ86UU0 1499 aa24.3■■□□□ 1.48
PLD3-211ENST00000485448 TOPAZ1Q8N9V7 1692 aa24.3■■□□□ 1.48
PLD3-211ENST00000485448 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
PLD3-211ENST00000485448 ST20-MTHFSA0A0A6YYL1 179 aa24.3■■□□□ 1.48
PLD3-211ENST00000485448 FAM83GA6ND36 823 aa24.3■■□□□ 1.48
PLD3-211ENST00000485448 GJD4Q96KN9 370 aaPredicted RBP24.3■■□□□ 1.48
PLD3-211ENST00000485448 SLIT2O94813 1529 aa24.28■■□□□ 1.48
PLD3-211ENST00000485448 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
PLD3-211ENST00000485448 ATRNO75882 1429 aa24.27■■□□□ 1.48
PLD3-211ENST00000485448 MARF1Q9Y4F3 1742 aaKnown RBP24.26■■□□□ 1.47
PLD3-211ENST00000485448 CDCA8Q53HL2 280 aa24.26■■□□□ 1.47
PLD3-211ENST00000485448 USP6P35125 1406 aa24.25■■□□□ 1.47
PLD3-211ENST00000485448 VPS72Q15906 364 aa24.25■■□□□ 1.47
PLD3-211ENST00000485448 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
PLD3-211ENST00000485448 PRDM11Q9NQV5 511 aa24.25■■□□□ 1.47
PLD3-211ENST00000485448 TERF2IPQ9NYB0 399 aa24.25■■□□□ 1.47
PLD3-211ENST00000485448 TTC21AQ8NDW8 1320 aa24.24■■□□□ 1.47
PLD3-211ENST00000485448 NLRP6P59044 892 aa24.24■■□□□ 1.47
PLD3-211ENST00000485448 TMF1P82094 1093 aa24.24■■□□□ 1.47
PLD3-211ENST00000485448 TMC1Q8TDI8 760 aa24.24■■□□□ 1.47
PLD3-211ENST00000485448 TESK2Q96S53 571 aa24.24■■□□□ 1.47
PLD3-211ENST00000485448 NUTM2GQ5VZR2 741 aa24.23■■□□□ 1.47
PLD3-211ENST00000485448 BTG4Q9NY30 223 aa24.23■■□□□ 1.47
PLD3-211ENST00000485448 NINLQ9Y2I6 1382 aa24.22■■□□□ 1.47
PLD3-211ENST00000485448 GCP02774 474 aa24.21■■□□□ 1.47
PLD3-211ENST00000485448 KTN1Q86UP2 1357 aaKnown RBP24.21■■□□□ 1.47
PLD3-211ENST00000485448 USP47Q96K76 1375 aa24.21■■□□□ 1.47
PLD3-211ENST00000485448 USP19O94966 1318 aa24.2■■□□□ 1.47
PLD3-211ENST00000485448 CPSF1Q10570 1443 aaKnown RBP24.2■■□□□ 1.46
PLD3-211ENST00000485448 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.46
PLD3-211ENST00000485448 TTC21BQ7Z4L5 1316 aa24.2■■□□□ 1.46
PLD3-211ENST00000485448 SSH2Q76I76 1423 aa24.19■■□□□ 1.46
PLD3-211ENST00000485448 ZC3H6P61129 1189 aaKnown RBP24.19■■□□□ 1.46
PLD3-211ENST00000485448 KCNH5Q8NCM2 988 aa24.19■■□□□ 1.46
PLD3-211ENST00000485448 CPDO75976 1380 aa24.17■■□□□ 1.46
PLD3-211ENST00000485448 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
PLD3-211ENST00000485448 ONECUT3O60422 494 aaPredicted RBP24.16■■□□□ 1.46
PLD3-211ENST00000485448 SLC12A5Q9H2X9 1139 aa24.16■■□□□ 1.46
PLD3-211ENST00000485448 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.16■■□□□ 1.46
PLD3-211ENST00000485448 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
PLD3-211ENST00000485448 EVA1CP58658 441 aa24.15■■□□□ 1.46
PLD3-211ENST00000485448 RGS12O14924 1447 aa24.15■■□□□ 1.46
PLD3-211ENST00000485448 COL14A1Q05707 1796 aaKnown RBP24.14■■□□□ 1.46
PLD3-211ENST00000485448 ABCA3Q99758 1704 aa24.14■■□□□ 1.45
PLD3-211ENST00000485448 UPF1Q92900 1129 aaKnown RBP eCLIP24.11■■□□□ 1.45
PLD3-211ENST00000485448 CHRNA2Q15822 529 aa24.1■■□□□ 1.45
PLD3-211ENST00000485448 EIF4G2P78344 907 aaKnown RBP eCLIP24.1■■□□□ 1.45
PLD3-211ENST00000485448 CCDC125Q86Z20 511 aa24.1■■□□□ 1.45
PLD3-211ENST00000485448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.09■■□□□ 1.45
PLD3-211ENST00000485448 SPATA31A5Q5VU36 1347 aa24.08■■□□□ 1.45
PLD3-211ENST00000485448 SPATA31A7Q8IWB4 1347 aa24.08■■□□□ 1.45
PLD3-211ENST00000485448 EDC4Q6P2E9 1401 aaKnown RBP24.08■■□□□ 1.45
PLD3-211ENST00000485448 SEPT12Q8IYM1 358 aa24.08■■□□□ 1.44
PLD3-211ENST00000485448 CRYBG1Q9Y4K1 1723 aa24.08■■□□□ 1.44
PLD3-211ENST00000485448 PLCH1Q4KWH8 1693 aa24.07■■□□□ 1.44
PLD3-211ENST00000485448 STRN4Q9NRL3 753 aa24.07■■□□□ 1.44
PLD3-211ENST00000485448 AATKQ6ZMQ8 1374 aa24.06■■□□□ 1.44
PLD3-211ENST00000485448 USP31Q70CQ4 1352 aa24.06■■□□□ 1.44
PLD3-211ENST00000485448 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
PLD3-211ENST00000485448 AKAP12Q02952 1782 aa24.05■■□□□ 1.44
PLD3-211ENST00000485448 CD163L1Q9NR16 1453 aa24.05■■□□□ 1.44
PLD3-211ENST00000485448 A0A1W2PP64 1363 aa24.04■■□□□ 1.44
PLD3-211ENST00000485448 A0A0G2JS52 829 aa24.04■■□□□ 1.44
PLD3-211ENST00000485448 MYT1Q01538 1121 aa24.04■■□□□ 1.44
PLD3-211ENST00000485448 ARHGEF25Q86VW2 580 aa24.04■■□□□ 1.44
PLD3-211ENST00000485448 PIAS4Q8N2W9 510 aaPredicted RBP24.04■■□□□ 1.44
PLD3-211ENST00000485448 THRAP3Q9Y2W1 955 aaKnown RBP24.04■■□□□ 1.44
PLD3-211ENST00000485448 SLIT3O75094 1523 aa24.03■■□□□ 1.44
PLD3-211ENST00000485448 ANKRD36BQ8N2N9 1353 aa24.03■■□□□ 1.44
PLD3-211ENST00000485448 SPATA31A1Q5TZJ5 1347 aa24.03■■□□□ 1.44
PLD3-211ENST00000485448 FAM98CQ17RN3 349 aaKnown RBP24.03■■□□□ 1.44
PLD3-211ENST00000485448 GLI3P10071 1580 aa24.02■■□□□ 1.44
PLD3-211ENST00000485448 NRKQ7Z2Y5 1582 aa24.02■■□□□ 1.44
PLD3-211ENST00000485448 KRT27Q7Z3Y8 459 aa24.02■■□□□ 1.44
PLD3-211ENST00000485448 ZBTB7CA1YPR0 619 aa24.01■■□□□ 1.43
PLD3-211ENST00000485448 BARGINQ6ZT62 677 aa24.01■■□□□ 1.43
PLD3-211ENST00000485448 NME9Q86XW9 330 aa24■■□□□ 1.43
PLD3-211ENST00000485448 COG3Q96JB2 828 aa23.99■■□□□ 1.43
PLD3-211ENST00000485448 PIK3C2AO00443 1686 aa23.99■■□□□ 1.43
PLD3-211ENST00000485448 MON2Q7Z3U7 1717 aa23.98■■□□□ 1.43
PLD3-211ENST00000485448 TCP11L2Q8N4U5 519 aa23.98■■□□□ 1.43
PLD3-211ENST00000485448 CAMTA1Q9Y6Y1 1673 aa23.97■■□□□ 1.43
PLD3-211ENST00000485448 LARP1Q6PKG0 1096 aaKnown RBP23.97■■□□□ 1.43
PLD3-211ENST00000485448 NRAPQ86VF7 1730 aa23.97■■□□□ 1.43
PLD3-211ENST00000485448 SOX12O15370 315 aa23.96■■□□□ 1.43
PLD3-211ENST00000485448 USP35Q9P2H5 1018 aa23.96■■□□□ 1.43
PLD3-211ENST00000485448 HSPA5P11021 654 aaKnown RBP23.95■■□□□ 1.42
PLD3-211ENST00000485448 TOM1L2Q6ZVM7 507 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms