RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 TJAP1Q5JTD0 557 aa9.6□□□□□ -0.87
SRRM1-213ENST00000485441 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
SRRM1-213ENST00000485441 PNMA1Q8ND90 353 aa9.59□□□□□ -0.87
SRRM1-213ENST00000485441 MTRQ99707 1265 aa9.59□□□□□ -0.87
SRRM1-213ENST00000485441 PRDM9Q9NQV7 894 aa9.59□□□□□ -0.87
SRRM1-213ENST00000485441 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
SRRM1-213ENST00000485441 ZBBXA8MT70 800 aa9.58□□□□□ -0.88
SRRM1-213ENST00000485441 CCNYL3P0C7X3 344 aa9.58□□□□□ -0.88
SRRM1-213ENST00000485441 NUDT12Q9BQG2 462 aa9.58□□□□□ -0.88
SRRM1-213ENST00000485441 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
SRRM1-213ENST00000485441 TRAIPQ9BWF2 469 aa9.58□□□□□ -0.88
SRRM1-213ENST00000485441 TLL1O43897 1013 aa9.57□□□□□ -0.88
SRRM1-213ENST00000485441 ADH1BP00325 375 aa9.57□□□□□ -0.88
SRRM1-213ENST00000485441 PDIA4P13667 645 aaKnown RBP9.57□□□□□ -0.88
SRRM1-213ENST00000485441 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
SRRM1-213ENST00000485441 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
SRRM1-213ENST00000485441 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
SRRM1-213ENST00000485441 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
SRRM1-213ENST00000485441 SEMA3FQ13275 785 aa9.56□□□□□ -0.88
SRRM1-213ENST00000485441 PDXDC2PQ6P474 469 aa9.56□□□□□ -0.88
SRRM1-213ENST00000485441 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
SRRM1-213ENST00000485441 CTHP32929 405 aa9.55□□□□□ -0.88
SRRM1-213ENST00000485441 PTCRAQ6ISU1 281 aaPredicted RBP9.55□□□□□ -0.88
SRRM1-213ENST00000485441 PBXIP1Q96AQ6 731 aa9.55□□□□□ -0.88
SRRM1-213ENST00000485441 TBC1D9Q6ZT07 1266 aa9.54□□□□□ -0.88
SRRM1-213ENST00000485441 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
SRRM1-213ENST00000485441 GPKOWQ92917 476 aaPredicted RBP eCLIP9.54□□□□□ -0.88
SRRM1-213ENST00000485441 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
SRRM1-213ENST00000485441 GPSM3Q9Y4H4 160 aa9.54□□□□□ -0.88
SRRM1-213ENST00000485441 RFX1P22670 979 aa9.53□□□□□ -0.88
SRRM1-213ENST00000485441 PTPN5P54829 565 aa9.53□□□□□ -0.88
SRRM1-213ENST00000485441 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
SRRM1-213ENST00000485441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
SRRM1-213ENST00000485441 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
SRRM1-213ENST00000485441 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-213ENST00000485441 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
SRRM1-213ENST00000485441 SLC6A16Q9GZN6 736 aa9.51□□□□□ -0.89
SRRM1-213ENST00000485441 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-213ENST00000485441 PHTF2Q8N3S3 785 aa9.5□□□□□ -0.89
SRRM1-213ENST00000485441 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
SRRM1-213ENST00000485441 ATP9BO43861 1147 aa9.49□□□□□ -0.89
SRRM1-213ENST00000485441 PTK2Q05397 1052 aa9.49□□□□□ -0.89
SRRM1-213ENST00000485441 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
SRRM1-213ENST00000485441 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
SRRM1-213ENST00000485441 UNC93B1Q9H1C4 597 aa9.49□□□□□ -0.89
SRRM1-213ENST00000485441 CEP126Q9P2H0 1117 aa9.48□□□□□ -0.89
SRRM1-213ENST00000485441 MCCD1P59942 119 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-213ENST00000485441 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-213ENST00000485441 NBPF14Q5TI25 921 aa9.47□□□□□ -0.89
SRRM1-213ENST00000485441 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
SRRM1-213ENST00000485441 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
SRRM1-213ENST00000485441 CHIC2Q9UKJ5 165 aa9.47□□□□□ -0.89
SRRM1-213ENST00000485441 ATG7O95352 703 aa9.46□□□□□ -0.9
SRRM1-213ENST00000485441 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
SRRM1-213ENST00000485441 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
SRRM1-213ENST00000485441 S1PR4O95977 384 aa9.45□□□□□ -0.9
SRRM1-213ENST00000485441 ADAM32Q8TC27 787 aa9.45□□□□□ -0.9
SRRM1-213ENST00000485441 CDCA8Q53HL2 280 aa9.43□□□□□ -0.9
SRRM1-213ENST00000485441 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
SRRM1-213ENST00000485441 BAP1Q92560 729 aa9.43□□□□□ -0.9
SRRM1-213ENST00000485441 ARHGAP9Q9BRR9 750 aa9.43□□□□□ -0.9
SRRM1-213ENST00000485441 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
SRRM1-213ENST00000485441 KCTD17Q8N5Z5 321 aa9.42□□□□□ -0.9
SRRM1-213ENST00000485441 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
SRRM1-213ENST00000485441 USTQ9Y2C2 406 aa9.42□□□□□ -0.9
SRRM1-213ENST00000485441 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
SRRM1-213ENST00000485441 PDE4CQ08493 712 aa9.41□□□□□ -0.9
SRRM1-213ENST00000485441 ZNF592Q92610 1267 aa9.41□□□□□ -0.9
SRRM1-213ENST00000485441 FOXJ1Q92949 421 aa9.41□□□□□ -0.9
SRRM1-213ENST00000485441 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
SRRM1-213ENST00000485441 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
SRRM1-213ENST00000485441 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
SRRM1-213ENST00000485441 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
SRRM1-213ENST00000485441 SKIP12755 728 aa9.4□□□□□ -0.9
SRRM1-213ENST00000485441 TSGA10IPQ3SY00 556 aa9.4□□□□□ -0.9
SRRM1-213ENST00000485441 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 USP17L5A8MUK1 530 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 ELOAQ14241 798 aaKnown RBP9.39□□□□□ -0.91
SRRM1-213ENST00000485441 USP17L2Q6R6M4 530 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 USP17L1Q7RTZ2 530 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 ZBTB33Q86T24 672 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 ZNF511Q8NB15 262 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 C1QTNF2Q9BXJ5 285 aa9.39□□□□□ -0.91
SRRM1-213ENST00000485441 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
SRRM1-213ENST00000485441 CARNS1A5YM72 827 aa9.38□□□□□ -0.91
SRRM1-213ENST00000485441 PPEF1O14829 653 aaPredicted RBP9.38□□□□□ -0.91
SRRM1-213ENST00000485441 SH3BP2P78314 561 aa9.38□□□□□ -0.91
SRRM1-213ENST00000485441 ERFEQ4G0M1 354 aa9.38□□□□□ -0.91
SRRM1-213ENST00000485441 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
SRRM1-213ENST00000485441 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
SRRM1-213ENST00000485441 CSB-PGBD3P0DP91 1061 aa9.37□□□□□ -0.91
SRRM1-213ENST00000485441 KCNC4Q03721 635 aa9.37□□□□□ -0.91
SRRM1-213ENST00000485441 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
SRRM1-213ENST00000485441 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
SRRM1-213ENST00000485441 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
SRRM1-213ENST00000485441 DEPDC4Q8N2C3 294 aa9.37□□□□□ -0.91
SRRM1-213ENST00000485441 HCSTQ9UBK5 93 aa9.37□□□□□ -0.91
SRRM1-213ENST00000485441 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
SRRM1-213ENST00000485441 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms