RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 PUS7Q96PZ0 661 aaKnown RBP19.13■□□□□ 0.65
TTC3-219ENST00000485402 ATAD2Q6PL18 1390 aa19.13■□□□□ 0.65
TTC3-219ENST00000485402 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
TTC3-219ENST00000485402 MORC1Q86VD1 984 aa19.13■□□□□ 0.65
TTC3-219ENST00000485402 TERF2IPQ9NYB0 399 aa19.12■□□□□ 0.65
TTC3-219ENST00000485402 NEUROD2Q15784 382 aa19.12■□□□□ 0.65
TTC3-219ENST00000485402 RBM33Q96EV2 1170 aaKnown RBP19.12■□□□□ 0.65
TTC3-219ENST00000485402 APAF1O14727 1248 aa19.11■□□□□ 0.65
TTC3-219ENST00000485402 CGNL1Q0VF96 1302 aa19.11■□□□□ 0.65
TTC3-219ENST00000485402 PTPRUQ92729 1446 aa19.11■□□□□ 0.65
TTC3-219ENST00000485402 KDM2BQ8NHM5 1336 aa19.1■□□□□ 0.65
TTC3-219ENST00000485402 HDGFL2Q7Z4V5 671 aaPredicted RBP19.1■□□□□ 0.65
TTC3-219ENST00000485402 KCNA6P17658 529 aa19.1■□□□□ 0.65
TTC3-219ENST00000485402 DLC1Q96QB1 1528 aa19.1■□□□□ 0.65
TTC3-219ENST00000485402 A0A1W2PP64 1363 aa19.1■□□□□ 0.65
TTC3-219ENST00000485402 ANKRD36BQ8N2N9 1353 aa19.09■□□□□ 0.65
TTC3-219ENST00000485402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.09■□□□□ 0.657e-7■■■■■ 27.2
TTC3-219ENST00000485402 NUDT16Q96DE0 195 aaKnown RBP19.09■□□□□ 0.65
TTC3-219ENST00000485402 SPRYD3Q8NCJ5 442 aa19.08■□□□□ 0.65
TTC3-219ENST00000485402 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.65
TTC3-219ENST00000485402 SIRT1Q96EB6 747 aa19.08■□□□□ 0.64
TTC3-219ENST00000485402 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
TTC3-219ENST00000485402 FAM135BQ49AJ0 1406 aa19.07■□□□□ 0.64
TTC3-219ENST00000485402 MED14O60244 1454 aa19.06■□□□□ 0.64
TTC3-219ENST00000485402 TECPR2O15040 1411 aa19.06■□□□□ 0.64
TTC3-219ENST00000485402 HSPA2P54652 639 aa19.05■□□□□ 0.64
TTC3-219ENST00000485402 COG6Q9Y2V7 657 aa19.05■□□□□ 0.64
TTC3-219ENST00000485402 CCDC61Q9Y6R9 512 aa19.05■□□□□ 0.64
TTC3-219ENST00000485402 NPC1L1Q9UHC9 1359 aa19.04■□□□□ 0.64
TTC3-219ENST00000485402 IGHDP01880 384 aa19.04■□□□□ 0.64
TTC3-219ENST00000485402 SEC24BO95487 1268 aa19.03■□□□□ 0.64
TTC3-219ENST00000485402 NINLQ9Y2I6 1382 aa19.03■□□□□ 0.64
TTC3-219ENST00000485402 PANK1Q8TE04 598 aa19.03■□□□□ 0.64
TTC3-219ENST00000485402 PPIP5K1Q6PFW1 1433 aa19.02■□□□□ 0.63
TTC3-219ENST00000485402 SLFN5Q08AF3 891 aa19.01■□□□□ 0.63
TTC3-219ENST00000485402 PRR36Q9H6K5 1346 aa19.01■□□□□ 0.63
TTC3-219ENST00000485402 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
TTC3-219ENST00000485402 CPS1P31327 1500 aa19.01■□□□□ 0.63
TTC3-219ENST00000485402 FYB1O15117 783 aa19.01■□□□□ 0.63
TTC3-219ENST00000485402 KDM4FA0A1W2PPD8 638 aa19■□□□□ 0.63
TTC3-219ENST00000485402 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
TTC3-219ENST00000485402 BCL2L13Q9BXK5 485 aa18.99■□□□□ 0.63
TTC3-219ENST00000485402 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
TTC3-219ENST00000485402 RRP7AQ9Y3A4 280 aaKnown RBP18.99■□□□□ 0.63
TTC3-219ENST00000485402 MTHFSP49914 203 aa18.99■□□□□ 0.63
TTC3-219ENST00000485402 DMRT2Q9Y5R5 561 aa18.99■□□□□ 0.63
TTC3-219ENST00000485402 GZF1Q9H116 711 aaPredicted RBP18.98■□□□□ 0.63
TTC3-219ENST00000485402 NPHP4O75161 1426 aaPredicted RBP18.98■□□□□ 0.63
TTC3-219ENST00000485402 CLUAP1Q96AJ1 413 aa18.98■□□□□ 0.63
TTC3-219ENST00000485402 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
TTC3-219ENST00000485402 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
TTC3-219ENST00000485402 FBLN1P23142 703 aa18.97■□□□□ 0.63
TTC3-219ENST00000485402 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
TTC3-219ENST00000485402 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.96■□□□□ 0.63
TTC3-219ENST00000485402 BECN1Q14457 450 aa18.95■□□□□ 0.62
TTC3-219ENST00000485402 NME9Q86XW9 330 aa18.95■□□□□ 0.62
TTC3-219ENST00000485402 ZRANB1Q9UGI0 708 aa18.95■□□□□ 0.62
TTC3-219ENST00000485402 NGDNQ8NEJ9 315 aaKnown RBP18.94■□□□□ 0.62
TTC3-219ENST00000485402 ACEP12821 1306 aa18.94■□□□□ 0.62
TTC3-219ENST00000485402 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
TTC3-219ENST00000485402 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
TTC3-219ENST00000485402 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
TTC3-219ENST00000485402 UPF2Q9HAU5 1272 aaKnown RBP18.92■□□□□ 0.62
TTC3-219ENST00000485402 ATP7BP35670 1465 aa18.91■□□□□ 0.62
TTC3-219ENST00000485402 NSD2O96028 1365 aa18.91■□□□□ 0.62
TTC3-219ENST00000485402 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
TTC3-219ENST00000485402 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
TTC3-219ENST00000485402 ZNF692Q9BU19 519 aaPredicted RBP18.91■□□□□ 0.62
TTC3-219ENST00000485402 E9PSI1 815 aa18.9■□□□□ 0.62
TTC3-219ENST00000485402 SOX12O15370 315 aa18.9■□□□□ 0.62
TTC3-219ENST00000485402 TNNQ9UQP3 1299 aa18.9■□□□□ 0.62
TTC3-219ENST00000485402 ZNF521Q96K83 1311 aa18.89■□□□□ 0.61
TTC3-219ENST00000485402 CPSF1Q10570 1443 aaKnown RBP18.88■□□□□ 0.61
TTC3-219ENST00000485402 COG3Q96JB2 828 aa18.87■□□□□ 0.61
TTC3-219ENST00000485402 PLEKHG3A1L390 1219 aa18.87■□□□□ 0.61
TTC3-219ENST00000485402 USP19O94966 1318 aa18.87■□□□□ 0.61
TTC3-219ENST00000485402 U2SURPO15042 1029 aaKnown RBP18.86■□□□□ 0.61
TTC3-219ENST00000485402 EDC4Q6P2E9 1401 aaKnown RBP18.86■□□□□ 0.61
TTC3-219ENST00000485402 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
TTC3-219ENST00000485402 FAM43AQ8N2R8 423 aa18.85■□□□□ 0.61
TTC3-219ENST00000485402 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
TTC3-219ENST00000485402 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
TTC3-219ENST00000485402 POLR3AO14802 1390 aaPredicted RBP18.85■□□□□ 0.61
TTC3-219ENST00000485402 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
TTC3-219ENST00000485402 TTC21BQ7Z4L5 1316 aa18.84■□□□□ 0.61
TTC3-219ENST00000485402 USP32Q8NFA0 1604 aa18.84■□□□□ 0.61
TTC3-219ENST00000485402 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.61
TTC3-219ENST00000485402 RRS1Q15050 365 aaKnown RBP18.83■□□□□ 0.61
TTC3-219ENST00000485402 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.61
TTC3-219ENST00000485402 PLEKHG5O94827 1062 aa18.83■□□□□ 0.6
TTC3-219ENST00000485402 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 ADGRB2O60241 1585 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 CDC42BPGQ6DT37 1551 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 PCDHB15Q9Y5E8 787 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
TTC3-219ENST00000485402 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 RRAGDQ9NQL2 400 aaPredicted RBP18.82■□□□□ 0.6
TTC3-219ENST00000485402 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
TTC3-219ENST00000485402 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms