RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PAK3O75914 559 aaPredicted RBP24.92■■□□□ 1.58
SREBF1-213ENST00000485080 LMOD2Q6P5Q4 547 aa24.91■■□□□ 1.58
SREBF1-213ENST00000485080 AKAP12Q02952 1782 aa24.9■■□□□ 1.58
SREBF1-213ENST00000485080 ADAMTS2O95450 1211 aa24.9■■□□□ 1.58
SREBF1-213ENST00000485080 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.58
SREBF1-213ENST00000485080 ZNF772Q68DY9 489 aaPredicted RBP24.89■■□□□ 1.58
SREBF1-213ENST00000485080 FNBP4Q8N3X1 1017 aaPredicted RBP24.88■■□□□ 1.57
SREBF1-213ENST00000485080 SLC12A5Q9H2X9 1139 aa24.88■■□□□ 1.57
SREBF1-213ENST00000485080 ABCA3Q99758 1704 aa24.87■■□□□ 1.57
SREBF1-213ENST00000485080 MARF1Q9Y4F3 1742 aaKnown RBP24.87■■□□□ 1.57
SREBF1-213ENST00000485080 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
SREBF1-213ENST00000485080 ABTB2Q8N961 1025 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 TMC1Q8TDI8 760 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 CABLES1Q8TDN4 633 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 C8orf37Q96NL8 207 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 AFF2P51816 1311 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
SREBF1-213ENST00000485080 KTN1Q86UP2 1357 aaKnown RBP24.85■■□□□ 1.57
SREBF1-213ENST00000485080 NGLY1Q96IV0 654 aa24.85■■□□□ 1.57
SREBF1-213ENST00000485080 TTC21BQ7Z4L5 1316 aa24.85■■□□□ 1.57
SREBF1-213ENST00000485080 MON2Q7Z3U7 1717 aa24.84■■□□□ 1.57
SREBF1-213ENST00000485080 HDGFL2Q7Z4V5 671 aaPredicted RBP24.84■■□□□ 1.57
SREBF1-213ENST00000485080 USP19O94966 1318 aa24.84■■□□□ 1.57
SREBF1-213ENST00000485080 POTEAQ6S8J7 498 aa24.83■■□□□ 1.57
SREBF1-213ENST00000485080 HAP1P54257 671 aaPredicted RBP24.82■■□□□ 1.56
SREBF1-213ENST00000485080 NRKQ7Z2Y5 1582 aa24.82■■□□□ 1.56
SREBF1-213ENST00000485080 NLRP13Q86W25 1043 aa24.82■■□□□ 1.56
SREBF1-213ENST00000485080 A0A1W2PP64 1363 aa24.81■■□□□ 1.56
SREBF1-213ENST00000485080 EDC4Q6P2E9 1401 aaKnown RBP24.8■■□□□ 1.56
SREBF1-213ENST00000485080 ILDR2Q71H61 639 aa24.8■■□□□ 1.56
SREBF1-213ENST00000485080 SLIT2O94813 1529 aa24.8■■□□□ 1.56
SREBF1-213ENST00000485080 ANKRD36BQ8N2N9 1353 aa24.8■■□□□ 1.56
SREBF1-213ENST00000485080 PIK3C2AO00443 1686 aa24.78■■□□□ 1.56
SREBF1-213ENST00000485080 BCL9LQ86UU0 1499 aa24.77■■□□□ 1.56
SREBF1-213ENST00000485080 PHRF1Q9P1Y6 1649 aaKnown RBP24.77■■□□□ 1.56
SREBF1-213ENST00000485080 NLRP6P59044 892 aa24.77■■□□□ 1.56
SREBF1-213ENST00000485080 NUTM2GQ5VZR2 741 aa24.77■■□□□ 1.56
SREBF1-213ENST00000485080 USP21Q9UK80 565 aa24.77■■□□□ 1.56
SREBF1-213ENST00000485080 USP31Q70CQ4 1352 aa24.77■■□□□ 1.56
SREBF1-213ENST00000485080 FAM83GA6ND36 823 aa24.76■■□□□ 1.55
SREBF1-213ENST00000485080 CPDO75976 1380 aa24.75■■□□□ 1.55
SREBF1-213ENST00000485080 SLIT3O75094 1523 aa24.75■■□□□ 1.55
SREBF1-213ENST00000485080 GCP02774 474 aa24.74■■□□□ 1.55
SREBF1-213ENST00000485080 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.73■■□□□ 1.55
SREBF1-213ENST00000485080 NWD2Q9ULI1 1742 aa24.73■■□□□ 1.55
SREBF1-213ENST00000485080 ATRNO75882 1429 aa24.73■■□□□ 1.55
SREBF1-213ENST00000485080 UNC5CLQ8IV45 518 aa24.73■■□□□ 1.55
SREBF1-213ENST00000485080 QTRT2Q9H974 415 aaKnown RBP24.73■■□□□ 1.55
SREBF1-213ENST00000485080 TRPC5Q9UL62 973 aaPredicted RBP24.73■■□□□ 1.55
SREBF1-213ENST00000485080 USP54Q70EL1 1684 aa24.72■■□□□ 1.55
SREBF1-213ENST00000485080 PLEKHG5O94827 1062 aa24.72■■□□□ 1.55
SREBF1-213ENST00000485080 COL14A1Q05707 1796 aaKnown RBP24.72■■□□□ 1.55
SREBF1-213ENST00000485080 MYOM1P52179 1685 aa24.72■■□□□ 1.55
SREBF1-213ENST00000485080 KIAA0232Q92628 1395 aa24.71■■□□□ 1.55
SREBF1-213ENST00000485080 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
SREBF1-213ENST00000485080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.7■■□□□ 1.54
SREBF1-213ENST00000485080 PRDM11Q9NQV5 511 aa24.7■■□□□ 1.54
SREBF1-213ENST00000485080 RXRBP28702 533 aa24.69■■□□□ 1.54
SREBF1-213ENST00000485080 KCNH5Q8NCM2 988 aa24.69■■□□□ 1.54
SREBF1-213ENST00000485080 CDK12Q9NYV4 1490 aaPredicted RBP24.69■■□□□ 1.54
SREBF1-213ENST00000485080 PLCH1Q4KWH8 1693 aa24.69■■□□□ 1.54
SREBF1-213ENST00000485080 NME9Q86XW9 330 aa24.68■■□□□ 1.54
SREBF1-213ENST00000485080 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
SREBF1-213ENST00000485080 ZC3H6P61129 1189 aaKnown RBP24.67■■□□□ 1.54
SREBF1-213ENST00000485080 OVOS2A0A0J9YW53 1432 aa24.65■■□□□ 1.54
SREBF1-213ENST00000485080 VPS72Q15906 364 aa24.65■■□□□ 1.54
SREBF1-213ENST00000485080 OVOS2Q6IE36 1432 aa24.65■■□□□ 1.54
SREBF1-213ENST00000485080 BTG4Q9NY30 223 aa24.65■■□□□ 1.54
SREBF1-213ENST00000485080 CARD14Q9BXL6 1004 aa24.64■■□□□ 1.54
SREBF1-213ENST00000485080 NRAPQ86VF7 1730 aa24.64■■□□□ 1.53
SREBF1-213ENST00000485080 NFAT5O94916 1531 aa24.63■■□□□ 1.53
SREBF1-213ENST00000485080 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
SREBF1-213ENST00000485080 ZRANB1Q9UGI0 708 aa24.63■■□□□ 1.53
SREBF1-213ENST00000485080 AATKQ6ZMQ8 1374 aa24.63■■□□□ 1.53
SREBF1-213ENST00000485080 ARHGEF25Q86VW2 580 aa24.62■■□□□ 1.53
SREBF1-213ENST00000485080 LMO7Q8WWI1 1683 aa24.62■■□□□ 1.53
SREBF1-213ENST00000485080 FYB1O15117 783 aa24.61■■□□□ 1.53
SREBF1-213ENST00000485080 CHRNA2Q15822 529 aa24.61■■□□□ 1.53
SREBF1-213ENST00000485080 KIF7Q2M1P5 1343 aa24.61■■□□□ 1.53
SREBF1-213ENST00000485080 ABCC6O95255 1503 aa24.58■■□□□ 1.53
SREBF1-213ENST00000485080 COG3Q96JB2 828 aa24.58■■□□□ 1.53
SREBF1-213ENST00000485080 POLR3GLQ9BT43 218 aa24.58■■□□□ 1.53
SREBF1-213ENST00000485080 CAMTA1Q9Y6Y1 1673 aa24.58■■□□□ 1.53
SREBF1-213ENST00000485080 NSD3Q9BZ95 1437 aa24.58■■□□□ 1.53
SREBF1-213ENST00000485080 COL18A1P39060 1754 aa24.57■■□□□ 1.52
SREBF1-213ENST00000485080 SOCS7O14512 581 aa24.56■■□□□ 1.52
SREBF1-213ENST00000485080 ONECUT3O60422 494 aaPredicted RBP24.56■■□□□ 1.52
SREBF1-213ENST00000485080 GLI3P10071 1580 aa24.55■■□□□ 1.52
SREBF1-213ENST00000485080 PANK3Q9H999 370 aa24.55■■□□□ 1.52
SREBF1-213ENST00000485080 SPATA31A5Q5VU36 1347 aa24.55■■□□□ 1.52
SREBF1-213ENST00000485080 SPATA31A7Q8IWB4 1347 aa24.55■■□□□ 1.52
SREBF1-213ENST00000485080 RGS12O14924 1447 aa24.54■■□□□ 1.52
SREBF1-213ENST00000485080 CGNL1Q0VF96 1302 aa24.54■■□□□ 1.52
SREBF1-213ENST00000485080 CCDC7Q96M83 1385 aa24.53■■□□□ 1.52
SREBF1-213ENST00000485080 COL5A2P05997 1499 aaPredicted RBP24.52■■□□□ 1.52
SREBF1-213ENST00000485080 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
SREBF1-213ENST00000485080 KIF20BQ96Q89 1820 aa24.51■■□□□ 1.51
SREBF1-213ENST00000485080 SOX12O15370 315 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms