RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 KIF13AQ9H1H9 1805 aa11.9□□□□□ -0.5
USP16-206ENST00000485067 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
USP16-206ENST00000485067 MCCP23508 829 aa11.89□□□□□ -0.51
USP16-206ENST00000485067 ZNF521Q96K83 1311 aa11.89□□□□□ -0.51
USP16-206ENST00000485067 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
USP16-206ENST00000485067 STK26Q9P289 416 aa11.88□□□□□ -0.51
USP16-206ENST00000485067 PTMSP20962 102 aa11.88□□□□□ -0.51
USP16-206ENST00000485067 EXOC6Q8TAG9 804 aa11.88□□□□□ -0.51
USP16-206ENST00000485067 ZFYVE9O95405 1425 aa11.87□□□□□ -0.51
USP16-206ENST00000485067 TMEM131LA2VDJ0 1609 aa11.87□□□□□ -0.51
USP16-206ENST00000485067 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
USP16-206ENST00000485067 FAM43BQ6ZT52 329 aaPredicted RBP11.87□□□□□ -0.51
USP16-206ENST00000485067 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
USP16-206ENST00000485067 CLTCQ00610 1675 aaKnown RBP11.87□□□□□ -0.51
USP16-206ENST00000485067 ARHGEF28Q8N1W1 1705 aaKnown RBP11.87□□□□□ -0.51
USP16-206ENST00000485067 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
USP16-206ENST00000485067 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
USP16-206ENST00000485067 NEFMP07197 916 aa11.86□□□□□ -0.51
USP16-206ENST00000485067 FAM193AP78312 1265 aa11.86□□□□□ -0.51
USP16-206ENST00000485067 SLC52A1Q9NWF4 448 aa11.86□□□□□ -0.51
USP16-206ENST00000485067 C1orf115Q9H7X2 142 aa11.85□□□□□ -0.51
USP16-206ENST00000485067 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
USP16-206ENST00000485067 TCERG1O14776 1098 aaKnown RBP11.84□□□□□ -0.51
USP16-206ENST00000485067 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
USP16-206ENST00000485067 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.84□□□□□ -0.51
USP16-206ENST00000485067 PRDM16Q9HAZ2 1276 aa11.84□□□□□ -0.51
USP16-206ENST00000485067 TULP4Q9NRJ4 1543 aa11.84□□□□□ -0.51
USP16-206ENST00000485067 CABP2Q9NPB3 220 aa11.84□□□□□ -0.51
USP16-206ENST00000485067 EVC2Q86UK5 1308 aa11.83□□□□□ -0.52
USP16-206ENST00000485067 SLFN5Q08AF3 891 aa11.83□□□□□ -0.52
USP16-206ENST00000485067 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
USP16-206ENST00000485067 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
USP16-206ENST00000485067 CCDC146Q8IYE0 955 aa11.83□□□□□ -0.52
USP16-206ENST00000485067 NSD2O96028 1365 aa11.82□□□□□ -0.52
USP16-206ENST00000485067 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
USP16-206ENST00000485067 MS4A1P11836 297 aa11.82□□□□□ -0.52
USP16-206ENST00000485067 NINLQ9Y2I6 1382 aa11.82□□□□□ -0.52
USP16-206ENST00000485067 CLGNO14967 610 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 SETQ01105 290 aaPredicted RBP11.81□□□□□ -0.52
USP16-206ENST00000485067 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 SHPRHQ149N8 1683 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 CGNL1Q0VF96 1302 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 MORC1Q86VD1 984 aa11.81□□□□□ -0.52
USP16-206ENST00000485067 NKTRP30414 1462 aaKnown RBP11.81□□□□□ -0.52
USP16-206ENST00000485067 E9PSI1 815 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 ANKRD36BQ8N2N9 1353 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
USP16-206ENST00000485067 AGLP35573 1532 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 RGS3P49796 1198 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 CC2D2BQ6DHV5 1058 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 PROM2Q8N271 834 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 CRBNQ96SW2 442 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
USP16-206ENST00000485067 PATL2C9JE40 543 aaKnown RBP11.79□□□□□ -0.52
USP16-206ENST00000485067 APAF1O14727 1248 aa11.79□□□□□ -0.52
USP16-206ENST00000485067 PLIN1O60240 522 aa11.79□□□□□ -0.52
USP16-206ENST00000485067 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
USP16-206ENST00000485067 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
USP16-206ENST00000485067 ARHGEF40Q8TER5 1519 aa11.79□□□□□ -0.52
USP16-206ENST00000485067 PTPRMP28827 1452 aa11.78□□□□□ -0.52
USP16-206ENST00000485067 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
USP16-206ENST00000485067 CWC22Q9HCG8 908 aaKnown RBP11.78□□□□□ -0.52
USP16-206ENST00000485067 A2ML1A8K2U0 1454 aa11.78□□□□□ -0.52
USP16-206ENST00000485067 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
USP16-206ENST00000485067 CFAP53Q96M91 514 aa11.77□□□□□ -0.52
USP16-206ENST00000485067 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.52
USP16-206ENST00000485067 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.53
USP16-206ENST00000485067 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
USP16-206ENST00000485067 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
USP16-206ENST00000485067 WAPLQ7Z5K2 1190 aa11.76□□□□□ -0.53
USP16-206ENST00000485067 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
USP16-206ENST00000485067 SPATA31D1Q6ZQQ2 1576 aa11.76□□□□□ -0.53
USP16-206ENST00000485067 RUNDC1Q96C34 613 aa11.76□□□□□ -0.53
USP16-206ENST00000485067 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
USP16-206ENST00000485067 SRPK2P78362 688 aaKnown RBP11.75□□□□□ -0.53
USP16-206ENST00000485067 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP16-206ENST00000485067 ANKRD26Q9UPS8 1709 aa11.75□□□□□ -0.53
USP16-206ENST00000485067 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
USP16-206ENST00000485067 CENPQQ7L2Z9 268 aaPredicted RBP11.75□□□□□ -0.53
USP16-206ENST00000485067 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
USP16-206ENST00000485067 RIMS2Q9UQ26 1411 aa11.74□□□□□ -0.53
USP16-206ENST00000485067 IQSEC2Q5JU85 1478 aa11.74□□□□□ -0.53
USP16-206ENST00000485067 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
USP16-206ENST00000485067 MMP14P50281 582 aa11.74□□□□□ -0.53
USP16-206ENST00000485067 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
USP16-206ENST00000485067 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
USP16-206ENST00000485067 POGKQ9P215 609 aa11.74□□□□□ -0.53
USP16-206ENST00000485067 A0A1W2PP64 1363 aa11.73□□□□□ -0.53
USP16-206ENST00000485067 PHF14O94880 888 aa11.73□□□□□ -0.53
USP16-206ENST00000485067 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
USP16-206ENST00000485067 C20orf194Q5TEA3 1177 aa11.73□□□□□ -0.53
USP16-206ENST00000485067 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
USP16-206ENST00000485067 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
USP16-206ENST00000485067 MED14O60244 1454 aa11.73□□□□□ -0.53
USP16-206ENST00000485067 PDE4AP27815 886 aa11.72□□□□□ -0.53
USP16-206ENST00000485067 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
USP16-206ENST00000485067 BACH2Q9BYV9 841 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms