RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
HLA-F-226ENST00000484704 NUDT16Q96DE0 195 aaKnown RBP21.4■■□□□ 1.02
HLA-F-226ENST00000484704 TNS3Q68CZ2 1445 aa21.39■■□□□ 1.02
HLA-F-226ENST00000484704 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.38■■□□□ 1.01
HLA-F-226ENST00000484704 NBPF8Q3BBV2 869 aa21.37■■□□□ 1.01
HLA-F-226ENST00000484704 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
HLA-F-226ENST00000484704 ITSN1Q15811 1721 aa21.37■■□□□ 1.01
HLA-F-226ENST00000484704 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
HLA-F-226ENST00000484704 SF3B2Q13435 895 aaKnown RBP21.36■■□□□ 1.01
HLA-F-226ENST00000484704 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
HLA-F-226ENST00000484704 QRICH2Q9H0J4 1663 aa21.36■■□□□ 1.01
HLA-F-226ENST00000484704 BRWD3Q6RI45 1802 aa21.36■■□□□ 1.01
HLA-F-226ENST00000484704 SBNO1A3KN83 1393 aa21.36■■□□□ 1.01
HLA-F-226ENST00000484704 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
HLA-F-226ENST00000484704 CCDC61Q9Y6R9 512 aa21.34■■□□□ 1.01
HLA-F-226ENST00000484704 ATP7BP35670 1465 aa21.33■■□□□ 1.01
HLA-F-226ENST00000484704 CABP2Q9NPB3 220 aa21.33■■□□□ 1.01
HLA-F-226ENST00000484704 A0A0G2JS52 829 aa21.32■■□□□ 1
HLA-F-226ENST00000484704 MYT1Q01538 1121 aa21.32■■□□□ 1
HLA-F-226ENST00000484704 FAM98CQ17RN3 349 aaKnown RBP21.32■■□□□ 1
HLA-F-226ENST00000484704 EVC2Q86UK5 1308 aa21.31■■□□□ 1
HLA-F-226ENST00000484704 BTG4Q9NY30 223 aa21.31■■□□□ 1
HLA-F-226ENST00000484704 FAM182BQ5T319 152 aa21.3■■□□□ 1
HLA-F-226ENST00000484704 PSDA5PKW4 1024 aaPredicted RBP21.29■■□□□ 1
HLA-F-226ENST00000484704 ACEP12821 1306 aa21.28■■□□□ 1
HLA-F-226ENST00000484704 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
HLA-F-226ENST00000484704 PPIP5K1Q6PFW1 1433 aa21.27■■□□□ 1
HLA-F-226ENST00000484704 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
HLA-F-226ENST00000484704 PLEKHG3A1L390 1219 aa21.25■□□□□ 0.99
HLA-F-226ENST00000484704 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
HLA-F-226ENST00000484704 TRPM3Q9HCF6 1732 aaPredicted RBP21.24■□□□□ 0.99
HLA-F-226ENST00000484704 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
HLA-F-226ENST00000484704 BAG6P46379 1132 aa21.24■□□□□ 0.99
HLA-F-226ENST00000484704 EN1Q05925 392 aaPredicted RBP21.24■□□□□ 0.99
HLA-F-226ENST00000484704 CLSPNQ9HAW4 1339 aa21.24■□□□□ 0.99
HLA-F-226ENST00000484704 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
HLA-F-226ENST00000484704 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
HLA-F-226ENST00000484704 POLR3AO14802 1390 aaPredicted RBP21.22■□□□□ 0.99
HLA-F-226ENST00000484704 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
HLA-F-226ENST00000484704 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
HLA-F-226ENST00000484704 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
HLA-F-226ENST00000484704 NUTM2GQ5VZR2 741 aa21.2■□□□□ 0.98
HLA-F-226ENST00000484704 ABTB2Q8N961 1025 aa21.19■□□□□ 0.98
HLA-F-226ENST00000484704 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
HLA-F-226ENST00000484704 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
HLA-F-226ENST00000484704 NRAPQ86VF7 1730 aa21.18■□□□□ 0.98
HLA-F-226ENST00000484704 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
HLA-F-226ENST00000484704 R3HDM1Q15032 1099 aaKnown RBP21.16■□□□□ 0.98
HLA-F-226ENST00000484704 SBNO2Q9Y2G9 1366 aa21.15■□□□□ 0.98
HLA-F-226ENST00000484704 BRD4O60885 1362 aaPredicted RBP21.14■□□□□ 0.98
HLA-F-226ENST00000484704 EZH2Q15910 746 aaKnown RBP21.14■□□□□ 0.97
HLA-F-226ENST00000484704 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
HLA-F-226ENST00000484704 TMC1Q8TDI8 760 aa21.14■□□□□ 0.97
HLA-F-226ENST00000484704 STRN4Q9NRL3 753 aa21.14■□□□□ 0.97
HLA-F-226ENST00000484704 COL14A1Q05707 1796 aaKnown RBP21.13■□□□□ 0.97
HLA-F-226ENST00000484704 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
HLA-F-226ENST00000484704 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
HLA-F-226ENST00000484704 KIAA0232Q92628 1395 aa21.12■□□□□ 0.97
HLA-F-226ENST00000484704 SPATA31A1Q5TZJ5 1347 aa21.12■□□□□ 0.97
HLA-F-226ENST00000484704 ST20-MTHFSA0A0A6YYL1 179 aa21.12■□□□□ 0.97
HLA-F-226ENST00000484704 TRIM37O94972 964 aa21.12■□□□□ 0.97
HLA-F-226ENST00000484704 ZNF692Q9BU19 519 aaPredicted RBP21.12■□□□□ 0.97
HLA-F-226ENST00000484704 USP6P35125 1406 aa21.12■□□□□ 0.97
HLA-F-226ENST00000484704 LRP5O75197 1615 aa21.11■□□□□ 0.97
HLA-F-226ENST00000484704 USP35Q9P2H5 1018 aa21.1■□□□□ 0.97
HLA-F-226ENST00000484704 NLRP6P59044 892 aa21.09■□□□□ 0.97
HLA-F-226ENST00000484704 CAMKK2Q96RR4 588 aa21.09■□□□□ 0.97
HLA-F-226ENST00000484704 PHRF1Q9P1Y6 1649 aaKnown RBP21.08■□□□□ 0.97
HLA-F-226ENST00000484704 ZBTB7CA1YPR0 619 aa21.08■□□□□ 0.97
HLA-F-226ENST00000484704 HDGFL2Q7Z4V5 671 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-226ENST00000484704 KTN1Q86UP2 1357 aaKnown RBP21.08■□□□□ 0.96
HLA-F-226ENST00000484704 USP47Q96K76 1375 aa21.08■□□□□ 0.96
HLA-F-226ENST00000484704 FAM196AQ6ZSG2 479 aa21.07■□□□□ 0.96
HLA-F-226ENST00000484704 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
HLA-F-226ENST00000484704 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
HLA-F-226ENST00000484704 APBA3O96018 575 aa21.06■□□□□ 0.96
HLA-F-226ENST00000484704 DISP2A7MBM2 1401 aa21.05■□□□□ 0.96
HLA-F-226ENST00000484704 EVA1CP58658 441 aa21.05■□□□□ 0.96
HLA-F-226ENST00000484704 TTC21BQ7Z4L5 1316 aa21.04■□□□□ 0.96
HLA-F-226ENST00000484704 TMF1P82094 1093 aa21.04■□□□□ 0.96
HLA-F-226ENST00000484704 TERF2IPQ9NYB0 399 aa21.04■□□□□ 0.96
HLA-F-226ENST00000484704 USP19O94966 1318 aa21.04■□□□□ 0.96
HLA-F-226ENST00000484704 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
HLA-F-226ENST00000484704 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
HLA-F-226ENST00000484704 GCP02774 474 aa21.03■□□□□ 0.96
HLA-F-226ENST00000484704 LARP1Q6PKG0 1096 aaKnown RBP21.03■□□□□ 0.96
HLA-F-226ENST00000484704 PUS7Q96PZ0 661 aaKnown RBP21.03■□□□□ 0.96
HLA-F-226ENST00000484704 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
HLA-F-226ENST00000484704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
HLA-F-226ENST00000484704 TESK2Q96S53 571 aa21.02■□□□□ 0.96
HLA-F-226ENST00000484704 SLC12A5Q9H2X9 1139 aa21.02■□□□□ 0.96
HLA-F-226ENST00000484704 NRKQ7Z2Y5 1582 aa21.02■□□□□ 0.95
HLA-F-226ENST00000484704 CPSF1Q10570 1443 aaKnown RBP21.01■□□□□ 0.95
HLA-F-226ENST00000484704 TNS1Q9HBL0 1735 aaKnown RBP21.01■□□□□ 0.95
HLA-F-226ENST00000484704 SOX12O15370 315 aa21■□□□□ 0.95
HLA-F-226ENST00000484704 PDE3BQ13370 1112 aa21■□□□□ 0.95
HLA-F-226ENST00000484704 CDCA8Q53HL2 280 aa21■□□□□ 0.95
HLA-F-226ENST00000484704 BARGINQ6ZT62 677 aa21■□□□□ 0.95
HLA-F-226ENST00000484704 SSH2Q76I76 1423 aa20.99■□□□□ 0.95
HLA-F-226ENST00000484704 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms