RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
ALMS1-204ENST00000484298 ERC2O15083 957 aa11.29□□□□□ -0.6
ALMS1-204ENST00000484298 NOL3O60936 208 aaKnown RBP11.29□□□□□ -0.6
ALMS1-204ENST00000484298 IVLP07476 585 aa11.29□□□□□ -0.6
ALMS1-204ENST00000484298 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
ALMS1-204ENST00000484298 CCDC6Q16204 474 aa11.29□□□□□ -0.6
ALMS1-204ENST00000484298 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
ALMS1-204ENST00000484298 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 TDO2P48775 406 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
ALMS1-204ENST00000484298 TRAK2O60296 914 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 HSPA4P34932 840 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
ALMS1-204ENST00000484298 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 FHAD1B1AJZ9 1412 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 ARHGAP29Q52LW3 1261 aa11.28□□□□□ -0.6
ALMS1-204ENST00000484298 SOGA3Q5TF21 947 aa11.27□□□□□ -0.6
ALMS1-204ENST00000484298 RNF214Q8ND24 703 aa11.27□□□□□ -0.6
ALMS1-204ENST00000484298 TNNT1P13805 278 aa11.27□□□□□ -0.6
ALMS1-204ENST00000484298 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.6
ALMS1-204ENST00000484298 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 UBE2Q2Q8WVN8 375 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
ALMS1-204ENST00000484298 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
ALMS1-204ENST00000484298 TAF4BQ92750 862 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 VPS37DQ86XT2 251 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 KIF15Q9NS87 1388 aa11.27□□□□□ -0.61
ALMS1-204ENST00000484298 GTPBP4Q9BZE4 634 aaKnown RBP11.27□□□□□ -0.61
ALMS1-204ENST00000484298 PDIA4P13667 645 aaKnown RBP11.26□□□□□ -0.61
ALMS1-204ENST00000484298 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 FERP16591 822 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 ANAPC15P60006 121 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-204ENST00000484298 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 IFFO1Q0D2I5 559 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 LTV1Q96GA3 475 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-204ENST00000484298 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-204ENST00000484298 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
ALMS1-204ENST00000484298 C22orf23Q9BZE7 217 aa11.26□□□□□ -0.61
ALMS1-204ENST00000484298 ZSCAN12O43309 604 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 RNF187Q5TA31 235 aaPredicted RBP11.25□□□□□ -0.61
ALMS1-204ENST00000484298 SPC24Q8NBT2 197 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 NEBLO76041 1014 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 ZNF397Q8NF99 534 aaPredicted RBP11.25□□□□□ -0.61
ALMS1-204ENST00000484298 ESPNB1AK53 854 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 SREK1Q8WXA9 508 aaKnown RBP11.25□□□□□ -0.61
ALMS1-204ENST00000484298 DNAI2Q9GZS0 605 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 KIF18AQ8NI77 898 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 DDX12PQ92771 950 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
ALMS1-204ENST00000484298 E9PSI1 815 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 TCHPQ9BT92 498 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 SARNPP82979 210 aaKnown RBP11.25□□□□□ -0.61
ALMS1-204ENST00000484298 EPB41L2O43491 1005 aaKnown RBP11.25□□□□□ -0.61
ALMS1-204ENST00000484298 MIPOL1Q8TD10 442 aa11.25□□□□□ -0.61
ALMS1-204ENST00000484298 FOSBP53539 338 aa11.24□□□□□ -0.61
ALMS1-204ENST00000484298 DNAJC21Q5F1R6 531 aaKnown RBP11.24□□□□□ -0.61
ALMS1-204ENST00000484298 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
ALMS1-204ENST00000484298 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
ALMS1-204ENST00000484298 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
ALMS1-204ENST00000484298 KRT18P05783 430 aaKnown RBP11.24□□□□□ -0.61
ALMS1-204ENST00000484298 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
ALMS1-204ENST00000484298 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
ALMS1-204ENST00000484298 CCDC160A6NGH7 325 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
ALMS1-204ENST00000484298 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 ZSCAN30Q86W11 494 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 CCNB3Q8WWL7 1395 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 CCDC158Q5M9N0 1113 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 TNMDQ9H2S6 317 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 CEP57L1Q8IYX8 460 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 RSRC1Q96IZ7 334 aaKnown RBP11.23□□□□□ -0.61
ALMS1-204ENST00000484298 FMNL2Q96PY5 1086 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 MSL1Q68DK7 614 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 VPS36Q86VN1 386 aa11.23□□□□□ -0.61
ALMS1-204ENST00000484298 NSRP1Q9H0G5 558 aaKnown RBP11.22□□□□□ -0.61
ALMS1-204ENST00000484298 KIF5CO60282 957 aa11.22□□□□□ -0.61
ALMS1-204ENST00000484298 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
ALMS1-204ENST00000484298 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
ALMS1-204ENST00000484298 FBF1Q8TES7 1133 aa11.22□□□□□ -0.61
ALMS1-204ENST00000484298 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
ALMS1-204ENST00000484298 GSTTP1A0A1W2PQM5 241 aa11.21□□□□□ -0.61
ALMS1-204ENST00000484298 GRPEL1Q9HAV7 217 aa11.21□□□□□ -0.61
ALMS1-204ENST00000484298 CEP164Q9UPV0 1460 aa11.21□□□□□ -0.61
ALMS1-204ENST00000484298 PPP1R12BO60237 982 aaPredicted RBP11.21□□□□□ -0.61
ALMS1-204ENST00000484298 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.61
ALMS1-204ENST00000484298 CCDC83Q8IWF9 413 aa11.21□□□□□ -0.61
ALMS1-204ENST00000484298 CEP112Q8N8E3 955 aa11.21□□□□□ -0.61
ALMS1-204ENST00000484298 SH3BGRP55822 239 aaPredicted RBP11.21□□□□□ -0.62
ALMS1-204ENST00000484298 NAA15Q9BXJ9 866 aaKnown RBP11.2□□□□□ -0.62
ALMS1-204ENST00000484298 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
ALMS1-204ENST00000484298 SFPQP23246 707 aaKnown RBP eCLIP11.2□□□□□ -0.62
ALMS1-204ENST00000484298 FAM177A1Q8N128 213 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms