RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 ALS2Q96Q42 1657 aa24.08■■□□□ 1.45
PCGF3-211ENST00000484141 EIF3AQ14152 1382 aaKnown RBP24.07■■□□□ 1.44
PCGF3-211ENST00000484141 TRPM1Q7Z4N2 1603 aa24.07■■□□□ 1.44
PCGF3-211ENST00000484141 A0A0G2JS52 829 aa24.07■■□□□ 1.44
PCGF3-211ENST00000484141 ONECUT3O60422 494 aaPredicted RBP24.07■■□□□ 1.44
PCGF3-211ENST00000484141 MYT1Q01538 1121 aa24.07■■□□□ 1.44
PCGF3-211ENST00000484141 NGDNQ8NEJ9 315 aaKnown RBP24.07■■□□□ 1.44
PCGF3-211ENST00000484141 PSDA5PKW4 1024 aaPredicted RBP24.06■■□□□ 1.44
PCGF3-211ENST00000484141 BAG6P46379 1132 aa24.06■■□□□ 1.44
PCGF3-211ENST00000484141 ITSN1Q15811 1721 aa24.06■■□□□ 1.44
PCGF3-211ENST00000484141 NBPF8Q3BBV2 869 aa24.05■■□□□ 1.44
PCGF3-211ENST00000484141 TOPAZ1Q8N9V7 1692 aa24.05■■□□□ 1.44
PCGF3-211ENST00000484141 QRICH2Q9H0J4 1663 aa24.04■■□□□ 1.44
PCGF3-211ENST00000484141 ARHGEF10O15013 1369 aa24.03■■□□□ 1.44
PCGF3-211ENST00000484141 GPRASP1Q5JY77 1395 aa24.03■■□□□ 1.44
PCGF3-211ENST00000484141 PLCH1Q4KWH8 1693 aa24.03■■□□□ 1.44
PCGF3-211ENST00000484141 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
PCGF3-211ENST00000484141 CENPJQ9HC77 1338 aaPredicted RBP24.03■■□□□ 1.44
PCGF3-211ENST00000484141 NWD2Q9ULI1 1742 aa24.02■■□□□ 1.44
PCGF3-211ENST00000484141 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
PCGF3-211ENST00000484141 CABP2Q9NPB3 220 aa24.01■■□□□ 1.43
PCGF3-211ENST00000484141 CRYBG1Q9Y4K1 1723 aa24.01■■□□□ 1.43
PCGF3-211ENST00000484141 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
PCGF3-211ENST00000484141 ACEP12821 1306 aa24■■□□□ 1.43
PCGF3-211ENST00000484141 FAM98CQ17RN3 349 aaKnown RBP23.99■■□□□ 1.43
PCGF3-211ENST00000484141 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
PCGF3-211ENST00000484141 SRPK2P78362 688 aaKnown RBP23.97■■□□□ 1.43
PCGF3-211ENST00000484141 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
PCGF3-211ENST00000484141 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
PCGF3-211ENST00000484141 POLR3AO14802 1390 aaPredicted RBP23.95■■□□□ 1.42
PCGF3-211ENST00000484141 PLEKHG3A1L390 1219 aa23.95■■□□□ 1.42
PCGF3-211ENST00000484141 EN1Q05925 392 aaPredicted RBP23.95■■□□□ 1.42
PCGF3-211ENST00000484141 BTG4Q9NY30 223 aa23.95■■□□□ 1.42
PCGF3-211ENST00000484141 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
PCGF3-211ENST00000484141 NRAPQ86VF7 1730 aa23.93■■□□□ 1.42
PCGF3-211ENST00000484141 R3HDM1Q15032 1099 aaKnown RBP23.91■■□□□ 1.42
PCGF3-211ENST00000484141 FAM182BQ5T319 152 aa23.91■■□□□ 1.42
PCGF3-211ENST00000484141 PHRF1Q9P1Y6 1649 aaKnown RBP23.91■■□□□ 1.42
PCGF3-211ENST00000484141 CABP1Q9NZU7 370 aa23.89■■□□□ 1.41
PCGF3-211ENST00000484141 COL14A1Q05707 1796 aaKnown RBP23.88■■□□□ 1.41
PCGF3-211ENST00000484141 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
PCGF3-211ENST00000484141 SPATA31A5Q5VU36 1347 aa23.86■■□□□ 1.41
PCGF3-211ENST00000484141 SPATA31A7Q8IWB4 1347 aa23.86■■□□□ 1.41
PCGF3-211ENST00000484141 ZC3H6P61129 1189 aaKnown RBP23.86■■□□□ 1.41
PCGF3-211ENST00000484141 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
PCGF3-211ENST00000484141 KIAA0232Q92628 1395 aa23.86■■□□□ 1.41
PCGF3-211ENST00000484141 TONSLQ96HA7 1378 aa23.86■■□□□ 1.41
PCGF3-211ENST00000484141 ABTB2Q8N961 1025 aa23.85■■□□□ 1.41
PCGF3-211ENST00000484141 DISP2A7MBM2 1401 aa23.84■■□□□ 1.41
PCGF3-211ENST00000484141 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
PCGF3-211ENST00000484141 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
PCGF3-211ENST00000484141 EZH2Q15910 746 aaKnown RBP23.83■■□□□ 1.41
PCGF3-211ENST00000484141 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
PCGF3-211ENST00000484141 NRKQ7Z2Y5 1582 aa23.82■■□□□ 1.4
PCGF3-211ENST00000484141 USP6P35125 1406 aa23.8■■□□□ 1.4
PCGF3-211ENST00000484141 THSD7AQ9UPZ6 1657 aa23.79■■□□□ 1.4
PCGF3-211ENST00000484141 TRIM37O94972 964 aa23.78■■□□□ 1.4
PCGF3-211ENST00000484141 TNS1Q9HBL0 1735 aaKnown RBP23.78■■□□□ 1.4
PCGF3-211ENST00000484141 USP19O94966 1318 aa23.78■■□□□ 1.4
PCGF3-211ENST00000484141 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
PCGF3-211ENST00000484141 SSH2Q76I76 1423 aa23.76■■□□□ 1.39
PCGF3-211ENST00000484141 AKAP12Q02952 1782 aa23.76■■□□□ 1.39
PCGF3-211ENST00000484141 FAM196AQ6ZSG2 479 aa23.76■■□□□ 1.39
PCGF3-211ENST00000484141 CAMKK2Q96RR4 588 aa23.76■■□□□ 1.39
PCGF3-211ENST00000484141 PIK3C2AO00443 1686 aa23.76■■□□□ 1.39
PCGF3-211ENST00000484141 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
PCGF3-211ENST00000484141 CAMTA1Q9Y6Y1 1673 aa23.74■■□□□ 1.39
PCGF3-211ENST00000484141 GCP02774 474 aa23.74■■□□□ 1.39
PCGF3-211ENST00000484141 APBA3O96018 575 aa23.73■■□□□ 1.39
PCGF3-211ENST00000484141 NLRP13Q86W25 1043 aa23.73■■□□□ 1.39
PCGF3-211ENST00000484141 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
PCGF3-211ENST00000484141 NLRP6P59044 892 aa23.72■■□□□ 1.39
PCGF3-211ENST00000484141 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
PCGF3-211ENST00000484141 ZBTB7CA1YPR0 619 aa23.71■■□□□ 1.39
PCGF3-211ENST00000484141 TTC21BQ7Z4L5 1316 aa23.7■■□□□ 1.38
PCGF3-211ENST00000484141 USP35Q9P2H5 1018 aa23.7■■□□□ 1.38
PCGF3-211ENST00000484141 CPDO75976 1380 aa23.69■■□□□ 1.38
PCGF3-211ENST00000484141 SBNO2Q9Y2G9 1366 aa23.69■■□□□ 1.38
PCGF3-211ENST00000484141 YY1P25490 414 aa23.69■■□□□ 1.38
PCGF3-211ENST00000484141 LARP1Q6PKG0 1096 aaKnown RBP23.69■■□□□ 1.38
PCGF3-211ENST00000484141 SLIT3O75094 1523 aa23.69■■□□□ 1.38
PCGF3-211ENST00000484141 CPSF1Q10570 1443 aaKnown RBP23.68■■□□□ 1.38
PCGF3-211ENST00000484141 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
PCGF3-211ENST00000484141 CD163L1Q9NR16 1453 aa23.68■■□□□ 1.38
PCGF3-211ENST00000484141 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
PCGF3-211ENST00000484141 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
PCGF3-211ENST00000484141 ST20-MTHFSA0A0A6YYL1 179 aa23.66■■□□□ 1.38
PCGF3-211ENST00000484141 SOX12O15370 315 aa23.66■■□□□ 1.38
PCGF3-211ENST00000484141 EVA1CP58658 441 aa23.66■■□□□ 1.38
PCGF3-211ENST00000484141 SLC12A5Q9H2X9 1139 aa23.66■■□□□ 1.38
PCGF3-211ENST00000484141 MON2Q7Z3U7 1717 aa23.66■■□□□ 1.38
PCGF3-211ENST00000484141 KTN1Q86UP2 1357 aaKnown RBP23.65■■□□□ 1.38
PCGF3-211ENST00000484141 NBPF14Q5TI25 921 aa23.65■■□□□ 1.38
PCGF3-211ENST00000484141 TMC1Q8TDI8 760 aa23.65■■□□□ 1.38
PCGF3-211ENST00000484141 TESK2Q96S53 571 aa23.65■■□□□ 1.38
PCGF3-211ENST00000484141 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
PCGF3-211ENST00000484141 COL18A1P39060 1754 aa23.64■■□□□ 1.37
PCGF3-211ENST00000484141 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
PCGF3-211ENST00000484141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.63■■□□□ 1.37
PCGF3-211ENST00000484141 RGPD5Q99666 1765 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms