RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.39
CPNE1-225ENST00000483495 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
CPNE1-225ENST00000483495 PLEKHG3A1L390 1219 aa17.44■□□□□ 0.38
CPNE1-225ENST00000483495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
CPNE1-225ENST00000483495 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
CPNE1-225ENST00000483495 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-225ENST00000483495 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
CPNE1-225ENST00000483495 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
CPNE1-225ENST00000483495 E9PSI1 815 aa17.41■□□□□ 0.38
CPNE1-225ENST00000483495 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
CPNE1-225ENST00000483495 SETD1BQ9UPS6 1966 aaKnown RBP17.41■□□□□ 0.38
CPNE1-225ENST00000483495 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
CPNE1-225ENST00000483495 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
CPNE1-225ENST00000483495 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
CPNE1-225ENST00000483495 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-225ENST00000483495 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.384e-24■■□□□ 12.7
CPNE1-225ENST00000483495 POLKQ9UBT6 870 aa17.4■□□□□ 0.38
CPNE1-225ENST00000483495 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
CPNE1-225ENST00000483495 NME9Q86XW9 330 aa17.39■□□□□ 0.38
CPNE1-225ENST00000483495 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
CPNE1-225ENST00000483495 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-225ENST00000483495 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
CPNE1-225ENST00000483495 ACEP12821 1306 aa17.38■□□□□ 0.37
CPNE1-225ENST00000483495 KCNA6P17658 529 aa17.37■□□□□ 0.37
CPNE1-225ENST00000483495 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
CPNE1-225ENST00000483495 USP6P35125 1406 aa17.37■□□□□ 0.37
CPNE1-225ENST00000483495 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
CPNE1-225ENST00000483495 COG3Q96JB2 828 aa17.37■□□□□ 0.37
CPNE1-225ENST00000483495 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
CPNE1-225ENST00000483495 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
CPNE1-225ENST00000483495 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
CPNE1-225ENST00000483495 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
CPNE1-225ENST00000483495 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
CPNE1-225ENST00000483495 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-225ENST00000483495 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
CPNE1-225ENST00000483495 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
CPNE1-225ENST00000483495 CHD2O14647 1828 aaKnown RBP17.34■□□□□ 0.37
CPNE1-225ENST00000483495 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
CPNE1-225ENST00000483495 OVOS2A0A0J9YW53 1432 aa17.33■□□□□ 0.37
CPNE1-225ENST00000483495 OVOS2Q6IE36 1432 aa17.33■□□□□ 0.37
CPNE1-225ENST00000483495 PNNQ9H307 717 aaKnown RBP17.33■□□□□ 0.37
CPNE1-225ENST00000483495 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.37
CPNE1-225ENST00000483495 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
CPNE1-225ENST00000483495 FBLN1P23142 703 aa17.32■□□□□ 0.36
CPNE1-225ENST00000483495 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
CPNE1-225ENST00000483495 FCHSD2O94868 740 aa17.31■□□□□ 0.36
CPNE1-225ENST00000483495 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
CPNE1-225ENST00000483495 NPHP4O75161 1426 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-225ENST00000483495 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
CPNE1-225ENST00000483495 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
CPNE1-225ENST00000483495 EXOC6Q8TAG9 804 aa17.31■□□□□ 0.36
CPNE1-225ENST00000483495 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
CPNE1-225ENST00000483495 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
CPNE1-225ENST00000483495 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
CPNE1-225ENST00000483495 CCDC136Q96JN2 1154 aa17.3■□□□□ 0.36
CPNE1-225ENST00000483495 PLIN1O60240 522 aa17.29■□□□□ 0.36
CPNE1-225ENST00000483495 IL13P35225 146 aa17.29■□□□□ 0.36
CPNE1-225ENST00000483495 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
CPNE1-225ENST00000483495 NALCNQ8IZF0 1738 aa17.28■□□□□ 0.36
CPNE1-225ENST00000483495 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-225ENST00000483495 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
CPNE1-225ENST00000483495 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
CPNE1-225ENST00000483495 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-225ENST00000483495 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.35
CPNE1-225ENST00000483495 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
CPNE1-225ENST00000483495 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
CPNE1-225ENST00000483495 RGPD8O14715 1765 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-225ENST00000483495 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
CPNE1-225ENST00000483495 MYH16Q9H6N6 1097 aa17.25■□□□□ 0.35
CPNE1-225ENST00000483495 IL16Q14005 1332 aa17.25■□□□□ 0.35
CPNE1-225ENST00000483495 ADGRL3Q9HAR2 1447 aa17.24■□□□□ 0.35
CPNE1-225ENST00000483495 NWD1Q149M9 1564 aa17.24■□□□□ 0.35
CPNE1-225ENST00000483495 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
CPNE1-225ENST00000483495 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
CPNE1-225ENST00000483495 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
CPNE1-225ENST00000483495 RIPK4P57078 832 aa17.22■□□□□ 0.35
CPNE1-225ENST00000483495 BCAR3O75815 825 aa17.21■□□□□ 0.35
CPNE1-225ENST00000483495 PIK3C2AO00443 1686 aa17.21■□□□□ 0.34
CPNE1-225ENST00000483495 NEFMP07197 916 aa17.2■□□□□ 0.34
CPNE1-225ENST00000483495 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-225ENST00000483495 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
CPNE1-225ENST00000483495 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
CPNE1-225ENST00000483495 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
CPNE1-225ENST00000483495 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
CPNE1-225ENST00000483495 HMOX1P09601 288 aa17.18■□□□□ 0.34
CPNE1-225ENST00000483495 EIF4A2Q14240 407 aaKnown RBP17.18■□□□□ 0.34
CPNE1-225ENST00000483495 PHACTR3Q96KR7 559 aa17.18■□□□□ 0.34
CPNE1-225ENST00000483495 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
CPNE1-225ENST00000483495 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
CPNE1-225ENST00000483495 PDE3AQ14432 1141 aa17.17■□□□□ 0.34
CPNE1-225ENST00000483495 SBNO1A3KN83 1393 aa17.16■□□□□ 0.34
CPNE1-225ENST00000483495 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
CPNE1-225ENST00000483495 RGPD1P0DJD0 1748 aa17.15■□□□□ 0.34
CPNE1-225ENST00000483495 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
CPNE1-225ENST00000483495 FLT4P35916 1363 aa17.14■□□□□ 0.34
CPNE1-225ENST00000483495 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.34
CPNE1-225ENST00000483495 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.33
CPNE1-225ENST00000483495 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
CPNE1-225ENST00000483495 RBM33Q96EV2 1170 aaKnown RBP17.14■□□□□ 0.33
CPNE1-225ENST00000483495 NLRP6P59044 892 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms