RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 VPS72Q15906 364 aa13.65□□□□□ -0.22
HMG20B-210ENST00000483417 ABCA3Q99758 1704 aa13.64□□□□□ -0.23
HMG20B-210ENST00000483417 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
HMG20B-210ENST00000483417 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-210ENST00000483417 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-210ENST00000483417 TRPM1Q7Z4N2 1603 aa13.64□□□□□ -0.23
HMG20B-210ENST00000483417 GLI3P10071 1580 aa13.63□□□□□ -0.23
HMG20B-210ENST00000483417 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
HMG20B-210ENST00000483417 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
HMG20B-210ENST00000483417 ITSN1Q15811 1721 aa13.63□□□□□ -0.23
HMG20B-210ENST00000483417 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
HMG20B-210ENST00000483417 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
HMG20B-210ENST00000483417 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
HMG20B-210ENST00000483417 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
HMG20B-210ENST00000483417 SRPK2P78362 688 aaKnown RBP13.61□□□□□ -0.23
HMG20B-210ENST00000483417 NWD2Q9ULI1 1742 aa13.61□□□□□ -0.23
HMG20B-210ENST00000483417 ATAD2Q6PL18 1390 aa13.6□□□□□ -0.23
HMG20B-210ENST00000483417 BTG4Q9NY30 223 aa13.6□□□□□ -0.23
HMG20B-210ENST00000483417 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
HMG20B-210ENST00000483417 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
HMG20B-210ENST00000483417 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
HMG20B-210ENST00000483417 ST20-MTHFSA0A0A6YYL1 179 aa13.58□□□□□ -0.24
HMG20B-210ENST00000483417 SEPT12Q8IYM1 358 aa13.58□□□□□ -0.24
HMG20B-210ENST00000483417 QRICH2Q9H0J4 1663 aa13.58□□□□□ -0.24
HMG20B-210ENST00000483417 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
HMG20B-210ENST00000483417 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
HMG20B-210ENST00000483417 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
HMG20B-210ENST00000483417 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
HMG20B-210ENST00000483417 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
HMG20B-210ENST00000483417 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
HMG20B-210ENST00000483417 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
HMG20B-210ENST00000483417 CCDC125Q86Z20 511 aa13.56□□□□□ -0.24
HMG20B-210ENST00000483417 KIAA0232Q92628 1395 aa13.56□□□□□ -0.24
HMG20B-210ENST00000483417 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
HMG20B-210ENST00000483417 USP19O94966 1318 aa13.55□□□□□ -0.24
HMG20B-210ENST00000483417 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
HMG20B-210ENST00000483417 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
HMG20B-210ENST00000483417 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
HMG20B-210ENST00000483417 ZC3H6P61129 1189 aaKnown RBP13.54□□□□□ -0.24
HMG20B-210ENST00000483417 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
HMG20B-210ENST00000483417 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
HMG20B-210ENST00000483417 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
HMG20B-210ENST00000483417 USP6P35125 1406 aa13.54□□□□□ -0.24
HMG20B-210ENST00000483417 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
HMG20B-210ENST00000483417 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
HMG20B-210ENST00000483417 GCP02774 474 aa13.53□□□□□ -0.24
HMG20B-210ENST00000483417 TESK2Q96S53 571 aa13.53□□□□□ -0.24
HMG20B-210ENST00000483417 CPDO75976 1380 aa13.53□□□□□ -0.24
HMG20B-210ENST00000483417 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
HMG20B-210ENST00000483417 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
HMG20B-210ENST00000483417 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
HMG20B-210ENST00000483417 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
HMG20B-210ENST00000483417 EP400Q96L91 3159 aa13.51□□□□□ -0.25
HMG20B-210ENST00000483417 CPSF1Q10570 1443 aaKnown RBP13.51□□□□□ -0.25
HMG20B-210ENST00000483417 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
HMG20B-210ENST00000483417 C11orf95C9JLR9 678 aaPredicted RBP13.51□□□□□ -0.25
HMG20B-210ENST00000483417 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
HMG20B-210ENST00000483417 NRKQ7Z2Y5 1582 aa13.5□□□□□ -0.25
HMG20B-210ENST00000483417 USP47Q96K76 1375 aa13.5□□□□□ -0.25
HMG20B-210ENST00000483417 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
HMG20B-210ENST00000483417 NLRP6P59044 892 aa13.49□□□□□ -0.25
HMG20B-210ENST00000483417 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-210ENST00000483417 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
HMG20B-210ENST00000483417 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-210ENST00000483417 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
HMG20B-210ENST00000483417 STRN4Q9NRL3 753 aa13.48□□□□□ -0.25
HMG20B-210ENST00000483417 SLIT3O75094 1523 aa13.48□□□□□ -0.25
HMG20B-210ENST00000483417 EVA1CP58658 441 aa13.47□□□□□ -0.25
HMG20B-210ENST00000483417 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
HMG20B-210ENST00000483417 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
HMG20B-210ENST00000483417 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
HMG20B-210ENST00000483417 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
HMG20B-210ENST00000483417 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
HMG20B-210ENST00000483417 PIK3C2AO00443 1686 aa13.46□□□□□ -0.26
HMG20B-210ENST00000483417 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
HMG20B-210ENST00000483417 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
HMG20B-210ENST00000483417 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
HMG20B-210ENST00000483417 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
HMG20B-210ENST00000483417 SLC12A5Q9H2X9 1139 aa13.45□□□□□ -0.26
HMG20B-210ENST00000483417 A0A0G2JS52 829 aa13.44□□□□□ -0.26
HMG20B-210ENST00000483417 MYT1Q01538 1121 aa13.44□□□□□ -0.26
HMG20B-210ENST00000483417 FAM182BQ5T319 152 aa13.44□□□□□ -0.26
HMG20B-210ENST00000483417 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
HMG20B-210ENST00000483417 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
HMG20B-210ENST00000483417 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
HMG20B-210ENST00000483417 COL5A2P05997 1499 aaPredicted RBP13.43□□□□□ -0.26
HMG20B-210ENST00000483417 COL18A1P39060 1754 aa13.43□□□□□ -0.26
HMG20B-210ENST00000483417 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
HMG20B-210ENST00000483417 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
HMG20B-210ENST00000483417 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
HMG20B-210ENST00000483417 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
HMG20B-210ENST00000483417 KCNH5Q8NCM2 988 aa13.42□□□□□ -0.26
HMG20B-210ENST00000483417 THRAP3Q9Y2W1 955 aaKnown RBP13.42□□□□□ -0.26
HMG20B-210ENST00000483417 MON2Q7Z3U7 1717 aa13.41□□□□□ -0.26
HMG20B-210ENST00000483417 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
HMG20B-210ENST00000483417 TMF1P82094 1093 aa13.4□□□□□ -0.26
HMG20B-210ENST00000483417 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
HMG20B-210ENST00000483417 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
HMG20B-210ENST00000483417 CRB1P82279 1406 aa13.39□□□□□ -0.27
HMG20B-210ENST00000483417 FAM196AQ6ZSG2 479 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms