RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 NGDNQ8NEJ9 315 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-206ENST00000482632 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
SPTLC1-206ENST00000482632 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
SPTLC1-206ENST00000482632 PRR36Q9H6K5 1346 aa14.12□□□□□ -0.15
SPTLC1-206ENST00000482632 KRT28Q7Z3Y7 464 aa14.11□□□□□ -0.15
SPTLC1-206ENST00000482632 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
SPTLC1-206ENST00000482632 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
SPTLC1-206ENST00000482632 ATP7BP35670 1465 aa14.11□□□□□ -0.15
SPTLC1-206ENST00000482632 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
SPTLC1-206ENST00000482632 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
SPTLC1-206ENST00000482632 PXDNQ92626 1479 aa14.1□□□□□ -0.15
SPTLC1-206ENST00000482632 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-206ENST00000482632 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
SPTLC1-206ENST00000482632 PROM2Q8N271 834 aa14.09□□□□□ -0.15
SPTLC1-206ENST00000482632 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-206ENST00000482632 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
SPTLC1-206ENST00000482632 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
SPTLC1-206ENST00000482632 HAP1P54257 671 aaPredicted RBP14.07□□□□□ -0.16
SPTLC1-206ENST00000482632 USP47Q96K76 1375 aa14.07□□□□□ -0.16
SPTLC1-206ENST00000482632 LRP6O75581 1613 aa14.06□□□□□ -0.16
SPTLC1-206ENST00000482632 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
SPTLC1-206ENST00000482632 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
SPTLC1-206ENST00000482632 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
SPTLC1-206ENST00000482632 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
SPTLC1-206ENST00000482632 TNS3Q68CZ2 1445 aa14.05□□□□□ -0.16
SPTLC1-206ENST00000482632 ACEP12821 1306 aa14.04□□□□□ -0.16
SPTLC1-206ENST00000482632 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
SPTLC1-206ENST00000482632 COL22A1Q8NFW1 1626 aaPredicted RBP14.04□□□□□ -0.16
SPTLC1-206ENST00000482632 UPF1Q92900 1129 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPTLC1-206ENST00000482632 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.16
SPTLC1-206ENST00000482632 TMC1Q8TDI8 760 aa14.02□□□□□ -0.17
SPTLC1-206ENST00000482632 C8orf37Q96NL8 207 aa14.02□□□□□ -0.17
SPTLC1-206ENST00000482632 CABP1Q9NZU7 370 aa14.02□□□□□ -0.17
SPTLC1-206ENST00000482632 ALS2Q96Q42 1657 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 ABCA3Q99758 1704 aa14.01□□□□□ -0.17
SPTLC1-206ENST00000482632 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
SPTLC1-206ENST00000482632 SPDYE6P0CI01 402 aa14□□□□□ -0.17
SPTLC1-206ENST00000482632 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
SPTLC1-206ENST00000482632 NUTM2GQ5VZR2 741 aa14□□□□□ -0.17
SPTLC1-206ENST00000482632 CABLES1Q8TDN4 633 aa14□□□□□ -0.17
SPTLC1-206ENST00000482632 POLR3AO14802 1390 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-206ENST00000482632 PLEKHG3A1L390 1219 aa13.99□□□□□ -0.17
SPTLC1-206ENST00000482632 NGLY1Q96IV0 654 aa13.99□□□□□ -0.17
SPTLC1-206ENST00000482632 POLR3GLQ9BT43 218 aa13.99□□□□□ -0.17
SPTLC1-206ENST00000482632 AFF2P51816 1311 aa13.98□□□□□ -0.17
SPTLC1-206ENST00000482632 TMF1P82094 1093 aa13.98□□□□□ -0.17
SPTLC1-206ENST00000482632 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-206ENST00000482632 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPTLC1-206ENST00000482632 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-206ENST00000482632 TESK2Q96S53 571 aa13.97□□□□□ -0.17
SPTLC1-206ENST00000482632 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
SPTLC1-206ENST00000482632 ABTB2Q8N961 1025 aa13.96□□□□□ -0.17
SPTLC1-206ENST00000482632 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.18
SPTLC1-206ENST00000482632 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-206ENST00000482632 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-206ENST00000482632 USP6P35125 1406 aa13.95□□□□□ -0.18
SPTLC1-206ENST00000482632 MON2Q7Z3U7 1717 aa13.95□□□□□ -0.18
SPTLC1-206ENST00000482632 PHRF1Q9P1Y6 1649 aaKnown RBP13.94□□□□□ -0.18
SPTLC1-206ENST00000482632 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
SPTLC1-206ENST00000482632 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
SPTLC1-206ENST00000482632 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
SPTLC1-206ENST00000482632 SLC12A5Q9H2X9 1139 aa13.93□□□□□ -0.18
SPTLC1-206ENST00000482632 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
SPTLC1-206ENST00000482632 PLCH1Q4KWH8 1693 aa13.93□□□□□ -0.18
SPTLC1-206ENST00000482632 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
SPTLC1-206ENST00000482632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.187e-7■■■□□ 18.1
SPTLC1-206ENST00000482632 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
SPTLC1-206ENST00000482632 USP21Q9UK80 565 aa13.92□□□□□ -0.18
SPTLC1-206ENST00000482632 NRKQ7Z2Y5 1582 aa13.92□□□□□ -0.18
SPTLC1-206ENST00000482632 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
SPTLC1-206ENST00000482632 NLRP6P59044 892 aa13.91□□□□□ -0.18
SPTLC1-206ENST00000482632 NLRP13Q86W25 1043 aa13.91□□□□□ -0.18
SPTLC1-206ENST00000482632 TTC21BQ7Z4L5 1316 aa13.9□□□□□ -0.18
SPTLC1-206ENST00000482632 SOX12O15370 315 aa13.9□□□□□ -0.18
SPTLC1-206ENST00000482632 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
SPTLC1-206ENST00000482632 BRD4O60885 1362 aaPredicted RBP13.9□□□□□ -0.18
SPTLC1-206ENST00000482632 A0A1W2PP64 1363 aa13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 PUS7Q96PZ0 661 aaKnown RBP13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
SPTLC1-206ENST00000482632 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
SPTLC1-206ENST00000482632 MYOM1P52179 1685 aa13.88□□□□□ -0.19
SPTLC1-206ENST00000482632 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
SPTLC1-206ENST00000482632 CD163L1Q9NR16 1453 aa13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 RXRBP28702 533 aa13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 EDC4Q6P2E9 1401 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
SPTLC1-206ENST00000482632 KIAA0232Q92628 1395 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms