RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.61
CCNC-204ENST00000482541 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.62
CCNC-204ENST00000482541 SBNO1A3KN83 1393 aa11.21□□□□□ -0.62
CCNC-204ENST00000482541 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
CCNC-204ENST00000482541 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
CCNC-204ENST00000482541 MARF1Q9Y4F3 1742 aaKnown RBP11.19□□□□□ -0.62
CCNC-204ENST00000482541 USP32Q8NFA0 1604 aa11.19□□□□□ -0.62
CCNC-204ENST00000482541 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
CCNC-204ENST00000482541 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCNC-204ENST00000482541 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
CCNC-204ENST00000482541 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
CCNC-204ENST00000482541 ARHGEF10O15013 1369 aa11.18□□□□□ -0.62
CCNC-204ENST00000482541 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
CCNC-204ENST00000482541 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
CCNC-204ENST00000482541 NBPF1Q3BBV0 1214 aa11.18□□□□□ -0.62
CCNC-204ENST00000482541 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
CCNC-204ENST00000482541 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
CCNC-204ENST00000482541 BCL9LQ86UU0 1499 aa11.17□□□□□ -0.62
CCNC-204ENST00000482541 ATRNO75882 1429 aa11.16□□□□□ -0.62
CCNC-204ENST00000482541 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
CCNC-204ENST00000482541 NUDT16Q96DE0 195 aaKnown RBP11.16□□□□□ -0.62
CCNC-204ENST00000482541 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
CCNC-204ENST00000482541 UNC5CLQ8IV45 518 aa11.15□□□□□ -0.62
CCNC-204ENST00000482541 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
CCNC-204ENST00000482541 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
CCNC-204ENST00000482541 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
CCNC-204ENST00000482541 RGS12O14924 1447 aa11.15□□□□□ -0.62
CCNC-204ENST00000482541 CABLES1Q8TDN4 633 aa11.15□□□□□ -0.63
CCNC-204ENST00000482541 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.63
CCNC-204ENST00000482541 SLIT2O94813 1529 aa11.14□□□□□ -0.63
CCNC-204ENST00000482541 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
CCNC-204ENST00000482541 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
CCNC-204ENST00000482541 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
CCNC-204ENST00000482541 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
CCNC-204ENST00000482541 ATP7BP35670 1465 aa11.12□□□□□ -0.63
CCNC-204ENST00000482541 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
CCNC-204ENST00000482541 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
CCNC-204ENST00000482541 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
CCNC-204ENST00000482541 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
CCNC-204ENST00000482541 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
CCNC-204ENST00000482541 POLR3AO14802 1390 aaPredicted RBP11.11□□□□□ -0.63
CCNC-204ENST00000482541 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
CCNC-204ENST00000482541 NBPF8Q3BBV2 869 aa11.11□□□□□ -0.63
CCNC-204ENST00000482541 ATAD2Q6PL18 1390 aa11.1□□□□□ -0.63
CCNC-204ENST00000482541 ACEP12821 1306 aa11.1□□□□□ -0.63
CCNC-204ENST00000482541 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
CCNC-204ENST00000482541 VPS72Q15906 364 aa11.1□□□□□ -0.63
CCNC-204ENST00000482541 NWD2Q9ULI1 1742 aa11.1□□□□□ -0.63
CCNC-204ENST00000482541 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
CCNC-204ENST00000482541 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
CCNC-204ENST00000482541 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
CCNC-204ENST00000482541 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
CCNC-204ENST00000482541 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
CCNC-204ENST00000482541 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.64
CCNC-204ENST00000482541 ROCK2O75116 1388 aaKnown RBP11.08□□□□□ -0.64
CCNC-204ENST00000482541 PLCH1Q4KWH8 1693 aa11.07□□□□□ -0.64
CCNC-204ENST00000482541 TOPAZ1Q8N9V7 1692 aa11.07□□□□□ -0.64
CCNC-204ENST00000482541 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
CCNC-204ENST00000482541 GLI3P10071 1580 aa11.07□□□□□ -0.64
CCNC-204ENST00000482541 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
CCNC-204ENST00000482541 BTG4Q9NY30 223 aa11.06□□□□□ -0.64
CCNC-204ENST00000482541 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
CCNC-204ENST00000482541 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
CCNC-204ENST00000482541 QRICH2Q9H0J4 1663 aa11.06□□□□□ -0.64
CCNC-204ENST00000482541 PPIP5K1Q6PFW1 1433 aa11.06□□□□□ -0.64
CCNC-204ENST00000482541 ABTB2Q8N961 1025 aa11.06□□□□□ -0.64
CCNC-204ENST00000482541 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
CCNC-204ENST00000482541 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
CCNC-204ENST00000482541 NLRP13Q86W25 1043 aa11.05□□□□□ -0.64
CCNC-204ENST00000482541 SEPT12Q8IYM1 358 aa11.05□□□□□ -0.64
CCNC-204ENST00000482541 PRDM11Q9NQV5 511 aa11.05□□□□□ -0.64
CCNC-204ENST00000482541 CABP1Q9NZU7 370 aa11.05□□□□□ -0.64
CCNC-204ENST00000482541 NUTM2GQ5VZR2 741 aa11.04□□□□□ -0.64
CCNC-204ENST00000482541 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
CCNC-204ENST00000482541 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
CCNC-204ENST00000482541 KIAA0232Q92628 1395 aa11.02□□□□□ -0.65
CCNC-204ENST00000482541 ZC3H6P61129 1189 aaKnown RBP11.02□□□□□ -0.65
CCNC-204ENST00000482541 CARD11Q9BXL7 1154 aa11.02□□□□□ -0.65
CCNC-204ENST00000482541 NRAPQ86VF7 1730 aa11.02□□□□□ -0.65
CCNC-204ENST00000482541 SPATA31A5Q5VU36 1347 aa11.02□□□□□ -0.65
CCNC-204ENST00000482541 SPATA31A7Q8IWB4 1347 aa11.02□□□□□ -0.65
CCNC-204ENST00000482541 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 KRT27Q7Z3Y8 459 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 USP6P35125 1406 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 USP19O94966 1318 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 BRWD3Q6RI45 1802 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 CPDO75976 1380 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 PHRF1Q9P1Y6 1649 aaKnown RBP11.01□□□□□ -0.65
CCNC-204ENST00000482541 GCP02774 474 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
CCNC-204ENST00000482541 FAM98CQ17RN3 349 aaKnown RBP11.01□□□□□ -0.65
CCNC-204ENST00000482541 A0A0G2JS52 829 aa11□□□□□ -0.65
CCNC-204ENST00000482541 EVA1CP58658 441 aa11□□□□□ -0.65
CCNC-204ENST00000482541 MYT1Q01538 1121 aa11□□□□□ -0.65
CCNC-204ENST00000482541 BLMP54132 1417 aaPredicted RBP10.99□□□□□ -0.65
CCNC-204ENST00000482541 SSH2Q76I76 1423 aa10.99□□□□□ -0.65
CCNC-204ENST00000482541 NLRP6P59044 892 aa10.99□□□□□ -0.65
CCNC-204ENST00000482541 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
CCNC-204ENST00000482541 SPATA31A1Q5TZJ5 1347 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms