RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
CTDSP1-208ENST00000482272 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.69
CTDSP1-208ENST00000482272 FAM83GA6ND36 823 aa19.38■□□□□ 0.69
CTDSP1-208ENST00000482272 VPS72Q15906 364 aa19.38■□□□□ 0.69
CTDSP1-208ENST00000482272 CCDC9Q9Y3X0 531 aaKnown RBP19.38■□□□□ 0.69
CTDSP1-208ENST00000482272 CCDC125Q86Z20 511 aa19.37■□□□□ 0.69
CTDSP1-208ENST00000482272 CCDC61Q9Y6R9 512 aa19.37■□□□□ 0.69
CTDSP1-208ENST00000482272 EP400Q96L91 3159 aa19.36■□□□□ 0.69
CTDSP1-208ENST00000482272 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
CTDSP1-208ENST00000482272 POLR3AO14802 1390 aaPredicted RBP19.34■□□□□ 0.69
CTDSP1-208ENST00000482272 COL14A1Q05707 1796 aaKnown RBP19.34■□□□□ 0.69
CTDSP1-208ENST00000482272 CENPJQ9HC77 1338 aaPredicted RBP19.33■□□□□ 0.69
CTDSP1-208ENST00000482272 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
CTDSP1-208ENST00000482272 BTG4Q9NY30 223 aa19.33■□□□□ 0.68
CTDSP1-208ENST00000482272 ACEP12821 1306 aa19.32■□□□□ 0.68
CTDSP1-208ENST00000482272 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
CTDSP1-208ENST00000482272 SRPK2P78362 688 aaKnown RBP19.32■□□□□ 0.68
CTDSP1-208ENST00000482272 NBPF8Q3BBV2 869 aa19.32■□□□□ 0.68
CTDSP1-208ENST00000482272 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
CTDSP1-208ENST00000482272 NRKQ7Z2Y5 1582 aa19.29■□□□□ 0.68
CTDSP1-208ENST00000482272 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
CTDSP1-208ENST00000482272 PRDM11Q9NQV5 511 aa19.29■□□□□ 0.68
CTDSP1-208ENST00000482272 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
CTDSP1-208ENST00000482272 A0A0G2JS52 829 aa19.27■□□□□ 0.68
CTDSP1-208ENST00000482272 MYT1Q01538 1121 aa19.27■□□□□ 0.68
CTDSP1-208ENST00000482272 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.68
CTDSP1-208ENST00000482272 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
CTDSP1-208ENST00000482272 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
CTDSP1-208ENST00000482272 ROCK2O75116 1388 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-208ENST00000482272 SF3B2Q13435 895 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-208ENST00000482272 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-208ENST00000482272 LMO7Q8WWI1 1683 aa19.24■□□□□ 0.67
CTDSP1-208ENST00000482272 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 ZC3H6P61129 1189 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 NLRP13Q86W25 1043 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 AKAP12Q02952 1782 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 BLMP54132 1417 aaPredicted RBP19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 PIK3C2AO00443 1686 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 THSD7AQ9UPZ6 1657 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 EVC2Q86UK5 1308 aa19.23■□□□□ 0.67
CTDSP1-208ENST00000482272 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
CTDSP1-208ENST00000482272 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
CTDSP1-208ENST00000482272 SPATA31A7Q8IWB4 1347 aa19.22■□□□□ 0.67
CTDSP1-208ENST00000482272 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
CTDSP1-208ENST00000482272 BRD4O60885 1362 aaPredicted RBP19.2■□□□□ 0.66
CTDSP1-208ENST00000482272 USP6P35125 1406 aa19.2■□□□□ 0.66
CTDSP1-208ENST00000482272 SSH2Q76I76 1423 aa19.2■□□□□ 0.66
CTDSP1-208ENST00000482272 EVA1CP58658 441 aa19.2■□□□□ 0.66
CTDSP1-208ENST00000482272 USP19O94966 1318 aa19.2■□□□□ 0.66
CTDSP1-208ENST00000482272 STRN4Q9NRL3 753 aa19.19■□□□□ 0.66
CTDSP1-208ENST00000482272 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
CTDSP1-208ENST00000482272 SLIT3O75094 1523 aa19.16■□□□□ 0.66
CTDSP1-208ENST00000482272 GCP02774 474 aa19.16■□□□□ 0.66
CTDSP1-208ENST00000482272 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-208ENST00000482272 SPATA31A1Q5TZJ5 1347 aa19.16■□□□□ 0.66
CTDSP1-208ENST00000482272 MON2Q7Z3U7 1717 aa19.15■□□□□ 0.66
CTDSP1-208ENST00000482272 NLRP6P59044 892 aa19.15■□□□□ 0.66
CTDSP1-208ENST00000482272 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-208ENST00000482272 DEFB132Q7Z7B7 95 aa19.15■□□□□ 0.66
CTDSP1-208ENST00000482272 COL18A1P39060 1754 aa19.14■□□□□ 0.65
CTDSP1-208ENST00000482272 BAG6P46379 1132 aa19.13■□□□□ 0.65
CTDSP1-208ENST00000482272 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
CTDSP1-208ENST00000482272 CPDO75976 1380 aa19.13■□□□□ 0.65
CTDSP1-208ENST00000482272 CD163L1Q9NR16 1453 aa19.12■□□□□ 0.65
CTDSP1-208ENST00000482272 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
CTDSP1-208ENST00000482272 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
CTDSP1-208ENST00000482272 FAM182BQ5T319 152 aa19.12■□□□□ 0.65
CTDSP1-208ENST00000482272 CARD11Q9BXL7 1154 aa19.12■□□□□ 0.65
CTDSP1-208ENST00000482272 TNS1Q9HBL0 1735 aaKnown RBP19.11■□□□□ 0.65
CTDSP1-208ENST00000482272 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
CTDSP1-208ENST00000482272 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
CTDSP1-208ENST00000482272 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
CTDSP1-208ENST00000482272 RGPD5Q99666 1765 aa19.09■□□□□ 0.65
CTDSP1-208ENST00000482272 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
CTDSP1-208ENST00000482272 LARP1Q6PKG0 1096 aaKnown RBP19.09■□□□□ 0.65
CTDSP1-208ENST00000482272 PDE3BQ13370 1112 aa19.08■□□□□ 0.64
CTDSP1-208ENST00000482272 FAM196AQ6ZSG2 479 aa19.08■□□□□ 0.64
CTDSP1-208ENST00000482272 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.64
CTDSP1-208ENST00000482272 THRAP3Q9Y2W1 955 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-208ENST00000482272 TTC21BQ7Z4L5 1316 aa19.07■□□□□ 0.64
CTDSP1-208ENST00000482272 RGPD1P0DJD0 1748 aa19.07■□□□□ 0.64
CTDSP1-208ENST00000482272 USP54Q70EL1 1684 aa19.07■□□□□ 0.64
CTDSP1-208ENST00000482272 NFAT5O94916 1531 aa19.06■□□□□ 0.64
CTDSP1-208ENST00000482272 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
CTDSP1-208ENST00000482272 WNK3Q9BYP7 1800 aa19.06■□□□□ 0.64
CTDSP1-208ENST00000482272 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
CTDSP1-208ENST00000482272 PARP4Q9UKK3 1724 aaKnown RBP19.04■□□□□ 0.64
CTDSP1-208ENST00000482272 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
CTDSP1-208ENST00000482272 KTN1Q86UP2 1357 aaKnown RBP19.04■□□□□ 0.64
CTDSP1-208ENST00000482272 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
CTDSP1-208ENST00000482272 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
CTDSP1-208ENST00000482272 TESK2Q96S53 571 aa19.02■□□□□ 0.64
CTDSP1-208ENST00000482272 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
CTDSP1-208ENST00000482272 LRRC37A3O60309 1634 aa19.02■□□□□ 0.64
CTDSP1-208ENST00000482272 CRB1P82279 1406 aa19.01■□□□□ 0.63
CTDSP1-208ENST00000482272 TRIM37O94972 964 aa19.01■□□□□ 0.63
CTDSP1-208ENST00000482272 TOM1L2Q6ZVM7 507 aa19.01■□□□□ 0.63
CTDSP1-208ENST00000482272 SRCAPQ6ZRS2 3230 aa19■□□□□ 0.63
CTDSP1-208ENST00000482272 SLC24A1O60721 1099 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms