RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 PDE3BQ13370 1112 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 NAP1L5Q96NT1 182 aaPredicted RBP9.2□□□□□ -0.94
PKP4-211ENST00000481115 RRAGDQ9NQL2 400 aaPredicted RBP9.2□□□□□ -0.94
PKP4-211ENST00000481115 POLR3EQ9NVU0 708 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 SYCP2Q9BX26 1530 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 ARHGEF12Q9NZN5 1544 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 KDM6BO15054 1643 aa9.2□□□□□ -0.94
PKP4-211ENST00000481115 HMGB1P09429 215 aaKnown RBP9.19□□□□□ -0.94
PKP4-211ENST00000481115 PLPP6Q8IY26 295 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 DCAF11Q8TEB1 546 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 BEGAINQ9BUH8 593 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 TMEM106CQ9BVX2 250 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 SNRKQ9NRH2 765 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 AMOTL2Q9Y2J4 779 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 NCOA1Q15788 1441 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 MBD5Q9P267 1494 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 KDM5CP41229 1560 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 ARHGEF5Q12774 1597 aa9.19□□□□□ -0.94
PKP4-211ENST00000481115 DENND4BO75064 1496 aaPredicted RBP9.18□□□□□ -0.94
PKP4-211ENST00000481115 POGZQ7Z3K3 1410 aa9.18□□□□□ -0.94
PKP4-211ENST00000481115 ILDR1Q86SU0 546 aaPredicted RBP9.18□□□□□ -0.94
PKP4-211ENST00000481115 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
PKP4-211ENST00000481115 SCAPERQ9BY12 1400 aa9.18□□□□□ -0.94
PKP4-211ENST00000481115 ZNF644Q9H582 1327 aaPredicted RBP9.17□□□□□ -0.94
PKP4-211ENST00000481115 FSD2A1L4K1 749 aa9.17□□□□□ -0.94
PKP4-211ENST00000481115 MDM2Q00987 491 aaPredicted RBP9.17□□□□□ -0.94
PKP4-211ENST00000481115 TAF3Q5VWG9 929 aa9.17□□□□□ -0.94
PKP4-211ENST00000481115 CROCC2H7BZ55 1655 aa9.16□□□□□ -0.94
PKP4-211ENST00000481115 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
PKP4-211ENST00000481115 ZNF518AQ6AHZ1 1483 aa9.16□□□□□ -0.94
PKP4-211ENST00000481115 TRAPPC8Q9Y2L5 1435 aa9.16□□□□□ -0.94
PKP4-211ENST00000481115 ZMYM3Q14202 1370 aa9.16□□□□□ -0.94
PKP4-211ENST00000481115 TBC1D12O60347 775 aa9.16□□□□□ -0.94
PKP4-211ENST00000481115 TMEM259Q4ZIN3 620 aa9.16□□□□□ -0.94
PKP4-211ENST00000481115 CCDC141Q6ZP82 1450 aa9.15□□□□□ -0.94
PKP4-211ENST00000481115 RFC5P40937 340 aa9.15□□□□□ -0.94
PKP4-211ENST00000481115 MRE11P49959 708 aa9.15□□□□□ -0.94
PKP4-211ENST00000481115 DDX12PQ92771 950 aa9.15□□□□□ -0.94
PKP4-211ENST00000481115 USTQ9Y2C2 406 aa9.15□□□□□ -0.94
PKP4-211ENST00000481115 INO80Q9ULG1 1556 aaPredicted RBP9.15□□□□□ -0.95
PKP4-211ENST00000481115 HNRNPMP52272 730 aaKnown RBP eCLIP9.14□□□□□ -0.95
PKP4-211ENST00000481115 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 MYSM1Q5VVJ2 828 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 HECW2Q9P2P5 1572 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 KIDINS220Q9ULH0 1771 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 MLH3Q9UHC1 1453 aa9.14□□□□□ -0.95
PKP4-211ENST00000481115 GOLGA6L3A6NEY3 463 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 KIF20AO95235 890 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 RAPGEF3O95398 923 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 PTMSP20962 102 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
PKP4-211ENST00000481115 CLK2P49760 499 aaKnown RBP9.13□□□□□ -0.95
PKP4-211ENST00000481115 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.95
PKP4-211ENST00000481115 EVX2Q03828 476 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 LHX8Q68G74 356 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.13□□□□□ -0.957e-8■□□□□ 10.3
PKP4-211ENST00000481115 ZFYVE16Q7Z3T8 1539 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 SHANK2Q9UPX8 1470 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 ABCC5O15440 1437 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 DAPK1P53355 1430 aa9.13□□□□□ -0.95
PKP4-211ENST00000481115 CCDC7Q96M83 1385 aa9.12□□□□□ -0.95
PKP4-211ENST00000481115 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
PKP4-211ENST00000481115 RRP1P56182 461 aaKnown RBP9.12□□□□□ -0.95
PKP4-211ENST00000481115 BECN1Q14457 450 aa9.12□□□□□ -0.95
PKP4-211ENST00000481115 FAM161AQ3B820 660 aa9.12□□□□□ -0.95
PKP4-211ENST00000481115 AFAP1Q8N556 730 aa9.12□□□□□ -0.95
PKP4-211ENST00000481115 GLMNQ92990 594 aa9.12□□□□□ -0.95
PKP4-211ENST00000481115 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
PKP4-211ENST00000481115 RTEL1-TNFRSF6BF6WH68 1400 aa9.12□□□□□ -0.95
PKP4-211ENST00000481115 ATP7AQ04656 1500 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 ARHGEF40Q8TER5 1519 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 ESPNB1AK53 854 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 TNNT2P45379 298 aaPredicted RBP9.11□□□□□ -0.95
PKP4-211ENST00000481115 CNGB1Q14028 1251 aaPredicted RBP9.11□□□□□ -0.95
PKP4-211ENST00000481115 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 PRM3Q9NNZ6 103 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 ABCA6Q8N139 1617 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 HFM1A2PYH4 1435 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
PKP4-211ENST00000481115 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 FRAT2O75474 233 aaPredicted RBP9.1□□□□□ -0.95
PKP4-211ENST00000481115 CSB-PGBD3P0DP91 1061 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 FAM50AQ14320 339 aaKnown RBP9.1□□□□□ -0.95
PKP4-211ENST00000481115 HS1BP3Q53T59 392 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.1□□□□□ -0.95
PKP4-211ENST00000481115 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 IPO4Q8TEX9 1081 aaKnown RBP9.1□□□□□ -0.95
PKP4-211ENST00000481115 PHOX2BQ99453 314 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 C9orf84Q5VXU9 1444 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 DIP2CQ9Y2E4 1556 aa9.1□□□□□ -0.95
PKP4-211ENST00000481115 ROCK2O75116 1388 aaKnown RBP9.1□□□□□ -0.95
PKP4-211ENST00000481115 LRPPRCP42704 1394 aaKnown RBP9.1□□□□□ -0.95
PKP4-211ENST00000481115 ADGRL2O95490 1459 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 REREQ9P2R6 1566 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms