RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
PTPN7-212ENST00000480836 BLMP54132 1417 aaPredicted RBP19.46■□□□□ 0.71
PTPN7-212ENST00000480836 FAM98CQ17RN3 349 aaKnown RBP19.46■□□□□ 0.71
PTPN7-212ENST00000480836 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
PTPN7-212ENST00000480836 ZRANB1Q9UGI0 708 aa19.46■□□□□ 0.71
PTPN7-212ENST00000480836 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
PTPN7-212ENST00000480836 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
PTPN7-212ENST00000480836 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
PTPN7-212ENST00000480836 CHRNA2Q15822 529 aa19.43■□□□□ 0.7
PTPN7-212ENST00000480836 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
PTPN7-212ENST00000480836 ACEP12821 1306 aa19.41■□□□□ 0.7
PTPN7-212ENST00000480836 SPATA31A5Q5VU36 1347 aa19.41■□□□□ 0.7
PTPN7-212ENST00000480836 SPATA31A7Q8IWB4 1347 aa19.41■□□□□ 0.7
PTPN7-212ENST00000480836 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
PTPN7-212ENST00000480836 EIF3AQ14152 1382 aaKnown RBP19.4■□□□□ 0.7
PTPN7-212ENST00000480836 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.69
PTPN7-212ENST00000480836 KIAA0232Q92628 1395 aa19.39■□□□□ 0.69
PTPN7-212ENST00000480836 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.69
PTPN7-212ENST00000480836 PLEKHG3A1L390 1219 aa19.38■□□□□ 0.69
PTPN7-212ENST00000480836 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
PTPN7-212ENST00000480836 PRDM11Q9NQV5 511 aa19.38■□□□□ 0.69
PTPN7-212ENST00000480836 A0A0G2JS52 829 aa19.37■□□□□ 0.69
PTPN7-212ENST00000480836 MYT1Q01538 1121 aa19.37■□□□□ 0.69
PTPN7-212ENST00000480836 CCDC61Q9Y6R9 512 aa19.37■□□□□ 0.69
PTPN7-212ENST00000480836 SIN3AQ96ST3 1273 aa19.36■□□□□ 0.69
PTPN7-212ENST00000480836 CABP2Q9NPB3 220 aa19.36■□□□□ 0.69
PTPN7-212ENST00000480836 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
PTPN7-212ENST00000480836 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
PTPN7-212ENST00000480836 SPATA31A1Q5TZJ5 1347 aa19.34■□□□□ 0.69
PTPN7-212ENST00000480836 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
PTPN7-212ENST00000480836 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
PTPN7-212ENST00000480836 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
PTPN7-212ENST00000480836 THSD7AQ9UPZ6 1657 aa19.33■□□□□ 0.69
PTPN7-212ENST00000480836 PHRF1Q9P1Y6 1649 aaKnown RBP19.33■□□□□ 0.69
PTPN7-212ENST00000480836 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.68
PTPN7-212ENST00000480836 PSDA5PKW4 1024 aaPredicted RBP19.32■□□□□ 0.68
PTPN7-212ENST00000480836 CAMTA1Q9Y6Y1 1673 aa19.31■□□□□ 0.68
PTPN7-212ENST00000480836 SF3B2Q13435 895 aaKnown RBP19.31■□□□□ 0.68
PTPN7-212ENST00000480836 ABTB2Q8N961 1025 aa19.31■□□□□ 0.68
PTPN7-212ENST00000480836 LARP1Q6PKG0 1096 aaKnown RBP19.3■□□□□ 0.68
PTPN7-212ENST00000480836 USP35Q9P2H5 1018 aa19.3■□□□□ 0.68
PTPN7-212ENST00000480836 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
PTPN7-212ENST00000480836 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
PTPN7-212ENST00000480836 USP19O94966 1318 aa19.28■□□□□ 0.68
PTPN7-212ENST00000480836 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
PTPN7-212ENST00000480836 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
PTPN7-212ENST00000480836 NRKQ7Z2Y5 1582 aa19.27■□□□□ 0.67
PTPN7-212ENST00000480836 GCP02774 474 aa19.26■□□□□ 0.67
PTPN7-212ENST00000480836 BAG6P46379 1132 aa19.26■□□□□ 0.67
PTPN7-212ENST00000480836 EZH2Q15910 746 aaKnown RBP19.26■□□□□ 0.67
PTPN7-212ENST00000480836 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
PTPN7-212ENST00000480836 LMO7Q8WWI1 1683 aa19.25■□□□□ 0.67
PTPN7-212ENST00000480836 TRIM37O94972 964 aa19.25■□□□□ 0.67
PTPN7-212ENST00000480836 CAMKK2Q96RR4 588 aa19.24■□□□□ 0.67
PTPN7-212ENST00000480836 TNS1Q9HBL0 1735 aaKnown RBP19.23■□□□□ 0.67
PTPN7-212ENST00000480836 CPDO75976 1380 aa19.23■□□□□ 0.67
PTPN7-212ENST00000480836 EVA1CP58658 441 aa19.23■□□□□ 0.67
PTPN7-212ENST00000480836 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
PTPN7-212ENST00000480836 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
PTPN7-212ENST00000480836 BARGINQ6ZT62 677 aa19.22■□□□□ 0.67
PTPN7-212ENST00000480836 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
PTPN7-212ENST00000480836 R3HDM1Q15032 1099 aaKnown RBP19.21■□□□□ 0.67
PTPN7-212ENST00000480836 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
PTPN7-212ENST00000480836 USP6P35125 1406 aa19.2■□□□□ 0.66
PTPN7-212ENST00000480836 AXIN2Q9Y2T1 843 aa19.2■□□□□ 0.66
PTPN7-212ENST00000480836 DISP2A7MBM2 1401 aa19.19■□□□□ 0.66
PTPN7-212ENST00000480836 NLRP6P59044 892 aa19.19■□□□□ 0.66
PTPN7-212ENST00000480836 FAM196AQ6ZSG2 479 aa19.19■□□□□ 0.66
PTPN7-212ENST00000480836 TCP11L2Q8N4U5 519 aa19.19■□□□□ 0.66
PTPN7-212ENST00000480836 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
PTPN7-212ENST00000480836 COL5A2P05997 1499 aaPredicted RBP19.18■□□□□ 0.66
PTPN7-212ENST00000480836 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
PTPN7-212ENST00000480836 APBA3O96018 575 aa19.17■□□□□ 0.66
PTPN7-212ENST00000480836 PTF1AQ7RTS3 328 aa19.16■□□□□ 0.66
PTPN7-212ENST00000480836 COL18A1P39060 1754 aa19.16■□□□□ 0.66
PTPN7-212ENST00000480836 SLIT3O75094 1523 aa19.15■□□□□ 0.66
PTPN7-212ENST00000480836 LRP5O75197 1615 aa19.15■□□□□ 0.66
PTPN7-212ENST00000480836 PIK3C2AO00443 1686 aa19.15■□□□□ 0.66
PTPN7-212ENST00000480836 PDE3BQ13370 1112 aa19.15■□□□□ 0.66
PTPN7-212ENST00000480836 TTC21BQ7Z4L5 1316 aa19.14■□□□□ 0.65
PTPN7-212ENST00000480836 EVC2Q86UK5 1308 aa19.13■□□□□ 0.65
PTPN7-212ENST00000480836 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
PTPN7-212ENST00000480836 BRD4O60885 1362 aaPredicted RBP19.11■□□□□ 0.65
PTPN7-212ENST00000480836 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
PTPN7-212ENST00000480836 ARHGEF25Q86VW2 580 aa19.11■□□□□ 0.65
PTPN7-212ENST00000480836 THRAP3Q9Y2W1 955 aaKnown RBP19.11■□□□□ 0.65
PTPN7-212ENST00000480836 CRB1P82279 1406 aa19.1■□□□□ 0.65
PTPN7-212ENST00000480836 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
PTPN7-212ENST00000480836 SOX12O15370 315 aa19.1■□□□□ 0.65
PTPN7-212ENST00000480836 PEAK1Q9H792 1746 aa19.08■□□□□ 0.65
PTPN7-212ENST00000480836 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.65
PTPN7-212ENST00000480836 RGPD5Q99666 1765 aa19.08■□□□□ 0.64
PTPN7-212ENST00000480836 AKAP12Q02952 1782 aa19.07■□□□□ 0.64
PTPN7-212ENST00000480836 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
PTPN7-212ENST00000480836 MARCH10Q8NA82 808 aaPredicted RBP19.07■□□□□ 0.64
PTPN7-212ENST00000480836 RREB1Q92766 1687 aa19.07■□□□□ 0.64
PTPN7-212ENST00000480836 NUP188Q5SRE5 1749 aa19.06■□□□□ 0.64
PTPN7-212ENST00000480836 CD163L1Q9NR16 1453 aa19.06■□□□□ 0.64
PTPN7-212ENST00000480836 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-212ENST00000480836 WDR17Q8IZU2 1322 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms