RNA–Protein interactions for RNA: ENST00000480054.1

RABGAP1-210, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 423 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-210ENST00000480054 COPS2P61201 443 aa10.25□□□□□ -0.77
RABGAP1-210ENST00000480054 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
RABGAP1-210ENST00000480054 KCNH2Q12809 1159 aa10.24□□□□□ -0.77
RABGAP1-210ENST00000480054 SEMA3FQ13275 785 aa10.24□□□□□ -0.77
RABGAP1-210ENST00000480054 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
RABGAP1-210ENST00000480054 MAP10Q9P2G4 905 aa10.24□□□□□ -0.77
RABGAP1-210ENST00000480054 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
RABGAP1-210ENST00000480054 MTRQ99707 1265 aa10.23□□□□□ -0.77
RABGAP1-210ENST00000480054 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
RABGAP1-210ENST00000480054 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
RABGAP1-210ENST00000480054 TJAP1Q5JTD0 557 aa10.22□□□□□ -0.77
RABGAP1-210ENST00000480054 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
RABGAP1-210ENST00000480054 PDXDC2PQ6P474 469 aa10.22□□□□□ -0.77
RABGAP1-210ENST00000480054 IL21Q9HBE4 155 aa10.22□□□□□ -0.77
RABGAP1-210ENST00000480054 CTHP32929 405 aa10.21□□□□□ -0.77
RABGAP1-210ENST00000480054 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
RABGAP1-210ENST00000480054 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.77
RABGAP1-210ENST00000480054 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
RABGAP1-210ENST00000480054 PBXIP1Q96AQ6 731 aa10.21□□□□□ -0.77
RABGAP1-210ENST00000480054 TRAIPQ9BWF2 469 aa10.21□□□□□ -0.77
RABGAP1-210ENST00000480054 ACIN1Q9UKV3 1341 aaKnown RBP10.21□□□□□ -0.78
RABGAP1-210ENST00000480054 MCCD1P59942 119 aaPredicted RBP10.2□□□□□ -0.78
RABGAP1-210ENST00000480054 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
RABGAP1-210ENST00000480054 PDE4CQ08493 712 aa10.19□□□□□ -0.78
RABGAP1-210ENST00000480054 NBPF14Q5TI25 921 aa10.19□□□□□ -0.78
RABGAP1-210ENST00000480054 UCN2Q96RP3 112 aa10.19□□□□□ -0.78
RABGAP1-210ENST00000480054 PTK2Q05397 1052 aa10.18□□□□□ -0.78
RABGAP1-210ENST00000480054 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
RABGAP1-210ENST00000480054 TLL1O43897 1013 aa10.17□□□□□ -0.78
RABGAP1-210ENST00000480054 PTPN5P54829 565 aa10.17□□□□□ -0.78
RABGAP1-210ENST00000480054 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
RABGAP1-210ENST00000480054 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
RABGAP1-210ENST00000480054 SLC6A16Q9GZN6 736 aa10.17□□□□□ -0.78
RABGAP1-210ENST00000480054 TFIP11Q9UBB9 837 aaKnown RBP10.17□□□□□ -0.78
RABGAP1-210ENST00000480054 ZNF516Q92618 1163 aa10.15□□□□□ -0.78
RABGAP1-210ENST00000480054 ATP9BO43861 1147 aa10.14□□□□□ -0.79
RABGAP1-210ENST00000480054 RETREG2Q8NC44 543 aa10.14□□□□□ -0.79
RABGAP1-210ENST00000480054 UNC93B1Q9H1C4 597 aa10.14□□□□□ -0.79
RABGAP1-210ENST00000480054 MAFBQ9Y5Q3 323 aaPredicted RBP10.14□□□□□ -0.79
RABGAP1-210ENST00000480054 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
RABGAP1-210ENST00000480054 OCSTAMPQ9BR26 566 aa10.13□□□□□ -0.79
RABGAP1-210ENST00000480054 RFX1P22670 979 aa10.12□□□□□ -0.79
RABGAP1-210ENST00000480054 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
RABGAP1-210ENST00000480054 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
RABGAP1-210ENST00000480054 SH3BP5LQ7L8J4 393 aa10.12□□□□□ -0.79
RABGAP1-210ENST00000480054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
RABGAP1-210ENST00000480054 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
RABGAP1-210ENST00000480054 KCTD17Q8N5Z5 321 aa10.11□□□□□ -0.79
RABGAP1-210ENST00000480054 SH3RF1Q7Z6J0 888 aa10.1□□□□□ -0.79
RABGAP1-210ENST00000480054 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
RABGAP1-210ENST00000480054 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
RABGAP1-210ENST00000480054 USTQ9Y2C2 406 aa10.1□□□□□ -0.79
RABGAP1-210ENST00000480054 ATG7O95352 703 aa10.09□□□□□ -0.79
RABGAP1-210ENST00000480054 PLEKHM2Q8IWE5 1019 aa10.09□□□□□ -0.79
RABGAP1-210ENST00000480054 ARHGAP9Q9BRR9 750 aa10.09□□□□□ -0.79
RABGAP1-210ENST00000480054 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
RABGAP1-210ENST00000480054 PHTF2Q8N3S3 785 aa10.08□□□□□ -0.8
RABGAP1-210ENST00000480054 ADAM32Q8TC27 787 aa10.08□□□□□ -0.8
RABGAP1-210ENST00000480054 CHIC2Q9UKJ5 165 aa10.08□□□□□ -0.8
RABGAP1-210ENST00000480054 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
RABGAP1-210ENST00000480054 S1PR4O95977 384 aa10.07□□□□□ -0.8
RABGAP1-210ENST00000480054 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
RABGAP1-210ENST00000480054 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
RABGAP1-210ENST00000480054 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
RABGAP1-210ENST00000480054 ZBTB7CA1YPR0 619 aa10.06□□□□□ -0.8
RABGAP1-210ENST00000480054 KANK4Q5T7N3 995 aaPredicted RBP10.06□□□□□ -0.8
RABGAP1-210ENST00000480054 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
RABGAP1-210ENST00000480054 BPHLQ86WA6 291 aaPredicted RBP10.06□□□□□ -0.8
RABGAP1-210ENST00000480054 VRTNQ9H8Y1 702 aa10.06□□□□□ -0.8
RABGAP1-210ENST00000480054 PIK3CDO00329 1044 aa10.05□□□□□ -0.8
RABGAP1-210ENST00000480054 CSB-PGBD3P0DP91 1061 aa10.05□□□□□ -0.8
RABGAP1-210ENST00000480054 ELOAQ14241 798 aaKnown RBP10.05□□□□□ -0.8
RABGAP1-210ENST00000480054 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
RABGAP1-210ENST00000480054 FCF1Q9Y324 198 aaKnown RBP10.05□□□□□ -0.8
RABGAP1-210ENST00000480054 PCDHB9Q9Y5E1 797 aa10.05□□□□□ -0.8
RABGAP1-210ENST00000480054 SKIP12755 728 aa10.04□□□□□ -0.8
RABGAP1-210ENST00000480054 KCNC4Q03721 635 aa10.04□□□□□ -0.8
RABGAP1-210ENST00000480054 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
RABGAP1-210ENST00000480054 ZNF511Q8NB15 262 aa10.04□□□□□ -0.8
RABGAP1-210ENST00000480054 BAP1Q92560 729 aa10.04□□□□□ -0.8
RABGAP1-210ENST00000480054 PODXL2Q9NZ53 605 aa10.04□□□□□ -0.8
RABGAP1-210ENST00000480054 FAM174AQ8TBP5 190 aa10.03□□□□□ -0.8
RABGAP1-210ENST00000480054 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
RABGAP1-210ENST00000480054 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
RABGAP1-210ENST00000480054 USP17L5A8MUK1 530 aa10.02□□□□□ -0.81
RABGAP1-210ENST00000480054 USP17L2Q6R6M4 530 aa10.02□□□□□ -0.81
RABGAP1-210ENST00000480054 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
RABGAP1-210ENST00000480054 RNF135Q8IUD6 432 aa10.02□□□□□ -0.81
RABGAP1-210ENST00000480054 DZIP3Q86Y13 1208 aaKnown RBP10.01□□□□□ -0.81
RABGAP1-210ENST00000480054 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
RABGAP1-210ENST00000480054 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
RABGAP1-210ENST00000480054 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
RABGAP1-210ENST00000480054 ERFEQ4G0M1 354 aa10□□□□□ -0.81
RABGAP1-210ENST00000480054 ANKLE1Q8NAG6 615 aa10□□□□□ -0.81
RABGAP1-210ENST00000480054 PLPP7Q8NBV4 271 aa10□□□□□ -0.81
RABGAP1-210ENST00000480054 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
RABGAP1-210ENST00000480054 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
RABGAP1-210ENST00000480054 FAM196BA6NMK8 535 aa9.99□□□□□ -0.81
RABGAP1-210ENST00000480054 BRD1O95696 1058 aa9.99□□□□□ -0.81
RABGAP1-210ENST00000480054 GGCXP38435 758 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms