RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ADGRB2O60241 1585 aa9.91□□□□□ -0.82
VCP-205ENST00000479300 COL14A1Q05707 1796 aaKnown RBP9.91□□□□□ -0.82
VCP-205ENST00000479300 DISP2A7MBM2 1401 aa9.9□□□□□ -0.82
VCP-205ENST00000479300 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.82
VCP-205ENST00000479300 BAG6P46379 1132 aa9.9□□□□□ -0.82
VCP-205ENST00000479300 PSME1Q06323 249 aa9.9□□□□□ -0.82
VCP-205ENST00000479300 R3HDM1Q15032 1099 aaKnown RBP9.9□□□□□ -0.82
VCP-205ENST00000479300 PRAM1Q96QH2 718 aa9.9□□□□□ -0.82
VCP-205ENST00000479300 BTG4Q9NY30 223 aa9.9□□□□□ -0.82
VCP-205ENST00000479300 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.83
VCP-205ENST00000479300 ADGRB1O14514 1584 aa9.89□□□□□ -0.83
VCP-205ENST00000479300 SPATA31A5Q5VU36 1347 aa9.89□□□□□ -0.83
VCP-205ENST00000479300 SPATA31A7Q8IWB4 1347 aa9.89□□□□□ -0.83
VCP-205ENST00000479300 DLC1Q96QB1 1528 aa9.89□□□□□ -0.83
VCP-205ENST00000479300 MPHOSPH9Q99550 1183 aa9.89□□□□□ -0.83
VCP-205ENST00000479300 A0A0G2JS52 829 aa9.88□□□□□ -0.83
VCP-205ENST00000479300 MYT1Q01538 1121 aa9.88□□□□□ -0.83
VCP-205ENST00000479300 EZH2Q15910 746 aaKnown RBP9.88□□□□□ -0.83
VCP-205ENST00000479300 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
VCP-205ENST00000479300 CAMKK2Q96RR4 588 aa9.87□□□□□ -0.83
VCP-205ENST00000479300 DHX57Q6P158 1386 aaKnown RBP9.87□□□□□ -0.83
VCP-205ENST00000479300 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
VCP-205ENST00000479300 HIRIP3Q9BW71 556 aaPredicted RBP9.86□□□□□ -0.83
VCP-205ENST00000479300 RREB1Q92766 1687 aa9.86□□□□□ -0.83
VCP-205ENST00000479300 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
VCP-205ENST00000479300 TULP4Q9NRJ4 1543 aa9.85□□□□□ -0.83
VCP-205ENST00000479300 PHRF1Q9P1Y6 1649 aaKnown RBP9.85□□□□□ -0.83
VCP-205ENST00000479300 SPATA31A1Q5TZJ5 1347 aa9.84□□□□□ -0.83
VCP-205ENST00000479300 TRIM37O94972 964 aa9.84□□□□□ -0.83
VCP-205ENST00000479300 KIAA0232Q92628 1395 aa9.84□□□□□ -0.83
VCP-205ENST00000479300 MINK1Q8N4C8 1332 aaPredicted RBP9.83□□□□□ -0.84
VCP-205ENST00000479300 CHRNA2Q15822 529 aa9.83□□□□□ -0.84
VCP-205ENST00000479300 POGKQ9P215 609 aa9.83□□□□□ -0.84
VCP-205ENST00000479300 ATP7BP35670 1465 aa9.83□□□□□ -0.84
VCP-205ENST00000479300 PRDM11Q9NQV5 511 aa9.82□□□□□ -0.84
VCP-205ENST00000479300 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
VCP-205ENST00000479300 GPRASP1Q5JY77 1395 aa9.82□□□□□ -0.84
VCP-205ENST00000479300 WASLO00401 505 aaPredicted RBP9.81□□□□□ -0.84
VCP-205ENST00000479300 LMO7Q8WWI1 1683 aa9.8□□□□□ -0.84
VCP-205ENST00000479300 CAMTA1Q9Y6Y1 1673 aa9.8□□□□□ -0.84
VCP-205ENST00000479300 APBA3O96018 575 aa9.8□□□□□ -0.84
VCP-205ENST00000479300 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
VCP-205ENST00000479300 SSH2Q76I76 1423 aa9.8□□□□□ -0.84
VCP-205ENST00000479300 NRKQ7Z2Y5 1582 aa9.8□□□□□ -0.84
VCP-205ENST00000479300 ARHGEF28Q8N1W1 1705 aaKnown RBP9.79□□□□□ -0.84
VCP-205ENST00000479300 PARD3Q8TEW0 1356 aa9.79□□□□□ -0.84
VCP-205ENST00000479300 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
VCP-205ENST00000479300 ZC3H6P61129 1189 aaKnown RBP9.79□□□□□ -0.84
VCP-205ENST00000479300 NUTM2GQ5VZR2 741 aa9.79□□□□□ -0.84
VCP-205ENST00000479300 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
VCP-205ENST00000479300 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
VCP-205ENST00000479300 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
VCP-205ENST00000479300 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
VCP-205ENST00000479300 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
VCP-205ENST00000479300 ITSN1Q15811 1721 aa9.78□□□□□ -0.84
VCP-205ENST00000479300 PEAK1Q9H792 1746 aa9.78□□□□□ -0.84
VCP-205ENST00000479300 EIF3AQ14152 1382 aaKnown RBP9.77□□□□□ -0.84
VCP-205ENST00000479300 YY1P25490 414 aa9.77□□□□□ -0.85
VCP-205ENST00000479300 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
VCP-205ENST00000479300 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
VCP-205ENST00000479300 POLR3AO14802 1390 aaPredicted RBP9.76□□□□□ -0.85
VCP-205ENST00000479300 PTF1AQ7RTS3 328 aa9.76□□□□□ -0.85
VCP-205ENST00000479300 USP19O94966 1318 aa9.76□□□□□ -0.85
VCP-205ENST00000479300 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
VCP-205ENST00000479300 CASZ1Q86V15 1759 aa9.75□□□□□ -0.85
VCP-205ENST00000479300 PDGFDQ9GZP0 370 aaPredicted RBP9.75□□□□□ -0.85
VCP-205ENST00000479300 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
VCP-205ENST00000479300 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
VCP-205ENST00000479300 CPDO75976 1380 aa9.75□□□□□ -0.85
VCP-205ENST00000479300 COL5A2P05997 1499 aaPredicted RBP9.74□□□□□ -0.85
VCP-205ENST00000479300 NBPF8Q3BBV2 869 aa9.74□□□□□ -0.85
VCP-205ENST00000479300 ACEP12821 1306 aa9.74□□□□□ -0.85
VCP-205ENST00000479300 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
VCP-205ENST00000479300 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 KCNQ2O43526 872 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 PDE3BQ13370 1112 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 CDK19Q9BWU1 502 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 SPON1Q9HCB6 807 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 RAB3GAP2Q9H2M9 1393 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 NINLQ9Y2I6 1382 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 RGPD3A6NKT7 1758 aaPredicted RBP9.73□□□□□ -0.85
VCP-205ENST00000479300 RGPD4Q7Z3J3 1758 aa9.73□□□□□ -0.85
VCP-205ENST00000479300 PLEKHG3A1L390 1219 aa9.72□□□□□ -0.85
VCP-205ENST00000479300 MYOM1P52179 1685 aa9.71□□□□□ -0.85
VCP-205ENST00000479300 COL18A1P39060 1754 aa9.71□□□□□ -0.85
VCP-205ENST00000479300 EVA1CP58658 441 aa9.71□□□□□ -0.86
VCP-205ENST00000479300 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
VCP-205ENST00000479300 PROM2Q8N271 834 aa9.71□□□□□ -0.86
VCP-205ENST00000479300 GCP02774 474 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 PTGER2P43116 358 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 ABTB2Q8N961 1025 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 OVOS2A0A0G2JMS6 1433 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 OVOS2A0A0J9YW53 1432 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 CRB1P82279 1406 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 OVOS2Q6IE36 1432 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 SLIT3O75094 1523 aa9.7□□□□□ -0.86
VCP-205ENST00000479300 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms