RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
SSR3-207ENST00000478842 NR6A1Q15406 480 aa10.63□□□□□ -0.71
SSR3-207ENST00000478842 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
SSR3-207ENST00000478842 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
SSR3-207ENST00000478842 IRF5Q13568 498 aa10.62□□□□□ -0.71
SSR3-207ENST00000478842 ZPR1O75312 459 aa10.61□□□□□ -0.71
SSR3-207ENST00000478842 PTPN5P54829 565 aa10.61□□□□□ -0.71
SSR3-207ENST00000478842 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
SSR3-207ENST00000478842 GPR37L1O60883 481 aa10.6□□□□□ -0.71
SSR3-207ENST00000478842 DXOO77932 396 aaKnown RBP10.6□□□□□ -0.71
SSR3-207ENST00000478842 ADH1BP00325 375 aa10.6□□□□□ -0.71
SSR3-207ENST00000478842 MMP16P51512 607 aa10.6□□□□□ -0.71
SSR3-207ENST00000478842 CALR3Q96L12 384 aaKnown RBP10.6□□□□□ -0.71
SSR3-207ENST00000478842 MTRQ99707 1265 aa10.6□□□□□ -0.71
SSR3-207ENST00000478842 IL21Q9HBE4 155 aa10.6□□□□□ -0.71
SSR3-207ENST00000478842 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
SSR3-207ENST00000478842 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
SSR3-207ENST00000478842 FAM160A2Q8N612 972 aaPredicted RBP10.59□□□□□ -0.71
SSR3-207ENST00000478842 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
SSR3-207ENST00000478842 F12P00748 615 aaPredicted RBP10.58□□□□□ -0.72
SSR3-207ENST00000478842 SOX11P35716 441 aa10.58□□□□□ -0.72
SSR3-207ENST00000478842 GLMNQ92990 594 aa10.58□□□□□ -0.72
SSR3-207ENST00000478842 ARMC2Q8NEN0 867 aa10.57□□□□□ -0.72
SSR3-207ENST00000478842 POM121CA8CG34 1229 aa10.56□□□□□ -0.72
SSR3-207ENST00000478842 CTHP32929 405 aa10.56□□□□□ -0.72
SSR3-207ENST00000478842 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
SSR3-207ENST00000478842 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
SSR3-207ENST00000478842 EVA1BQ9NVM1 165 aa10.56□□□□□ -0.72
SSR3-207ENST00000478842 FKBPLQ9UIM3 349 aa10.56□□□□□ -0.72
SSR3-207ENST00000478842 VAC14Q08AM6 782 aa10.55□□□□□ -0.72
SSR3-207ENST00000478842 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
SSR3-207ENST00000478842 HDGFL1Q5TGJ6 251 aa10.54□□□□□ -0.72
SSR3-207ENST00000478842 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.723e-8■□□□□ 10.9
SSR3-207ENST00000478842 MRC2Q9UBG0 1479 aa10.54□□□□□ -0.72
SSR3-207ENST00000478842 WDR62O43379 1518 aa10.53□□□□□ -0.72
SSR3-207ENST00000478842 TLL1O43897 1013 aa10.53□□□□□ -0.72
SSR3-207ENST00000478842 EIF4G2P78344 907 aaKnown RBP eCLIP10.53□□□□□ -0.72
SSR3-207ENST00000478842 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
SSR3-207ENST00000478842 SLC6A16Q9GZN6 736 aa10.53□□□□□ -0.72
SSR3-207ENST00000478842 MAP10Q9P2G4 905 aa10.53□□□□□ -0.72
SSR3-207ENST00000478842 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.72
SSR3-207ENST00000478842 NR1H3Q13133 447 aa10.52□□□□□ -0.73
SSR3-207ENST00000478842 PRDM9Q9NQV7 894 aa10.52□□□□□ -0.73
SSR3-207ENST00000478842 ZBBXA8MT70 800 aa10.51□□□□□ -0.73
SSR3-207ENST00000478842 NBPF14Q5TI25 921 aa10.51□□□□□ -0.73
SSR3-207ENST00000478842 HCSTQ9UBK5 93 aa10.51□□□□□ -0.73
SSR3-207ENST00000478842 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
SSR3-207ENST00000478842 SEMA3FQ13275 785 aa10.5□□□□□ -0.73
SSR3-207ENST00000478842 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
SSR3-207ENST00000478842 ZNF516Q92618 1163 aa10.5□□□□□ -0.73
SSR3-207ENST00000478842 ALG2Q9H553 416 aa10.5□□□□□ -0.73
SSR3-207ENST00000478842 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
SSR3-207ENST00000478842 PTK2Q05397 1052 aa10.48□□□□□ -0.73
SSR3-207ENST00000478842 PPP1R15AO75807 674 aaPredicted RBP10.47□□□□□ -0.73
SSR3-207ENST00000478842 ADAMTS19Q8TE59 1207 aa10.47□□□□□ -0.73
SSR3-207ENST00000478842 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
SSR3-207ENST00000478842 FBXO45P0C2W1 286 aa10.46□□□□□ -0.73
SSR3-207ENST00000478842 KCNC4Q03721 635 aa10.46□□□□□ -0.73
SSR3-207ENST00000478842 CCDC24Q8N4L8 307 aa10.46□□□□□ -0.73
SSR3-207ENST00000478842 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
SSR3-207ENST00000478842 MCCD1P59942 119 aaPredicted RBP10.45□□□□□ -0.74
SSR3-207ENST00000478842 UNC93B1Q9H1C4 597 aa10.45□□□□□ -0.74
SSR3-207ENST00000478842 ITGBL1O95965 494 aaPredicted RBP10.43□□□□□ -0.74
SSR3-207ENST00000478842 S1PR4O95977 384 aa10.43□□□□□ -0.74
SSR3-207ENST00000478842 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
SSR3-207ENST00000478842 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
SSR3-207ENST00000478842 PPP1R12CQ9BZL4 782 aa10.42□□□□□ -0.74
SSR3-207ENST00000478842 GGCXP38435 758 aa10.41□□□□□ -0.74
SSR3-207ENST00000478842 ARHGAP9Q9BRR9 750 aa10.41□□□□□ -0.74
SSR3-207ENST00000478842 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
SSR3-207ENST00000478842 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
SSR3-207ENST00000478842 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
SSR3-207ENST00000478842 ACIN1Q9UKV3 1341 aaKnown RBP10.39□□□□□ -0.75
SSR3-207ENST00000478842 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
SSR3-207ENST00000478842 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
SSR3-207ENST00000478842 RIMBP3CA6NJZ7 1639 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 RIMBP3BA6NNM3 1639 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 RIMBP3Q9UFD9 1639 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
SSR3-207ENST00000478842 NFATC2IPQ8NCF5 419 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 PBXIP1Q96AQ6 731 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
SSR3-207ENST00000478842 CFAP70Q5T0N1 1121 aa10.37□□□□□ -0.75
SSR3-207ENST00000478842 SH3BP5LQ7L8J4 393 aa10.37□□□□□ -0.75
SSR3-207ENST00000478842 ADAM32Q8TC27 787 aa10.37□□□□□ -0.75
SSR3-207ENST00000478842 ZBTB24O43167 697 aaPredicted RBP10.36□□□□□ -0.75
SSR3-207ENST00000478842 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
SSR3-207ENST00000478842 PDE4CQ08493 712 aa10.36□□□□□ -0.75
SSR3-207ENST00000478842 TFIP11Q9UBB9 837 aaKnown RBP10.36□□□□□ -0.75
SSR3-207ENST00000478842 ATP9BO43861 1147 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 AGERQ15109 404 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 ZNF511Q8NB15 262 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 BAP1Q92560 729 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 PCDHB9Q9Y5E1 797 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 CFTRP13569 1480 aa10.35□□□□□ -0.75
SSR3-207ENST00000478842 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
SSR3-207ENST00000478842 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms