RNA–Protein interactions for RNA: ENST00000478516.1

PFKFB4-212, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 3

Gene PFKFB4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-212ENST00000478516 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
PFKFB4-212ENST00000478516 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
PFKFB4-212ENST00000478516 SBNO2Q9Y2G9 1366 aa12□□□□□ -0.49
PFKFB4-212ENST00000478516 TMEM94Q12767 1356 aa11.99□□□□□ -0.49
PFKFB4-212ENST00000478516 EIF3AQ14152 1382 aaKnown RBP11.99□□□□□ -0.49
PFKFB4-212ENST00000478516 KTN1Q86UP2 1357 aaKnown RBP11.99□□□□□ -0.49
PFKFB4-212ENST00000478516 PPLO60437 1756 aa11.98□□□□□ -0.49
PFKFB4-212ENST00000478516 NEXMIFQ5QGS0 1516 aa11.98□□□□□ -0.49
PFKFB4-212ENST00000478516 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
PFKFB4-212ENST00000478516 TMF1P82094 1093 aa11.98□□□□□ -0.49
PFKFB4-212ENST00000478516 RGS17Q9UGC6 210 aaPredicted RBP11.98□□□□□ -0.49
PFKFB4-212ENST00000478516 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
PFKFB4-212ENST00000478516 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
PFKFB4-212ENST00000478516 IER5LQ5T953 404 aa11.97□□□□□ -0.49
PFKFB4-212ENST00000478516 TMEM131LA2VDJ0 1609 aa11.97□□□□□ -0.49
PFKFB4-212ENST00000478516 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
PFKFB4-212ENST00000478516 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
PFKFB4-212ENST00000478516 ADGRB1O14514 1584 aa11.96□□□□□ -0.5
PFKFB4-212ENST00000478516 MSH6P52701 1360 aa11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 PUS7Q96PZ0 661 aaKnown RBP11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 SLAIN2Q9P270 581 aa11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 ROBO1Q9Y6N7 1651 aa11.94□□□□□ -0.5
PFKFB4-212ENST00000478516 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
PFKFB4-212ENST00000478516 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
PFKFB4-212ENST00000478516 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
PFKFB4-212ENST00000478516 YTHDC1Q96MU7 727 aaKnown RBP11.92□□□□□ -0.5
PFKFB4-212ENST00000478516 RALBP1Q15311 655 aa11.91□□□□□ -0.5
PFKFB4-212ENST00000478516 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
PFKFB4-212ENST00000478516 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.91□□□□□ -0.5
PFKFB4-212ENST00000478516 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
PFKFB4-212ENST00000478516 NWD1Q149M9 1564 aa11.91□□□□□ -0.5
PFKFB4-212ENST00000478516 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
PFKFB4-212ENST00000478516 RIMS2Q9UQ26 1411 aa11.9□□□□□ -0.5
PFKFB4-212ENST00000478516 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.5
PFKFB4-212ENST00000478516 ST18O60284 1047 aa11.89□□□□□ -0.51
PFKFB4-212ENST00000478516 NPC1L1Q9UHC9 1359 aa11.89□□□□□ -0.51
PFKFB4-212ENST00000478516 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 MYO5BQ9ULV0 1848 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 JCADQ9P266 1359 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
PFKFB4-212ENST00000478516 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
PFKFB4-212ENST00000478516 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
PFKFB4-212ENST00000478516 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
PFKFB4-212ENST00000478516 BRD4O60885 1362 aaPredicted RBP11.85□□□□□ -0.51
PFKFB4-212ENST00000478516 ATF3P18847 181 aa11.85□□□□□ -0.51
PFKFB4-212ENST00000478516 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
PFKFB4-212ENST00000478516 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
PFKFB4-212ENST00000478516 PANK3Q9H999 370 aa11.85□□□□□ -0.51
PFKFB4-212ENST00000478516 MYBBP1AQ9BQG0 1328 aaKnown RBP11.85□□□□□ -0.51
PFKFB4-212ENST00000478516 PIK3R4Q99570 1358 aa11.84□□□□□ -0.51
PFKFB4-212ENST00000478516 RGL2O15211 777 aa11.84□□□□□ -0.51
PFKFB4-212ENST00000478516 PLCG2P16885 1265 aa11.84□□□□□ -0.51
PFKFB4-212ENST00000478516 ASXL1Q8IXJ9 1541 aa11.84□□□□□ -0.51
PFKFB4-212ENST00000478516 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
PFKFB4-212ENST00000478516 INSRP06213 1382 aa11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 MEX3CQ5U5Q3 659 aaKnown RBP11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
PFKFB4-212ENST00000478516 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 ADAMTS13Q76LX8 1427 aa11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 YTHDC2Q9H6S0 1430 aaKnown RBP11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 DIP2AQ14689 1571 aa11.82□□□□□ -0.52
PFKFB4-212ENST00000478516 LRPPRCP42704 1394 aaKnown RBP11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 NLRP13Q86W25 1043 aa11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 COL16A1Q07092 1604 aaPredicted RBP11.81□□□□□ -0.52
PFKFB4-212ENST00000478516 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
PFKFB4-212ENST00000478516 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
PFKFB4-212ENST00000478516 MYOM1P52179 1685 aa11.79□□□□□ -0.52
PFKFB4-212ENST00000478516 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
PFKFB4-212ENST00000478516 EVC2Q86UK5 1308 aa11.79□□□□□ -0.52
PFKFB4-212ENST00000478516 TECPR2O15040 1411 aa11.78□□□□□ -0.52
PFKFB4-212ENST00000478516 NUBP1P53384 320 aa11.78□□□□□ -0.52
PFKFB4-212ENST00000478516 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
PFKFB4-212ENST00000478516 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
PFKFB4-212ENST00000478516 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
PFKFB4-212ENST00000478516 SETD1AO15047 1707 aaKnown RBP11.77□□□□□ -0.53
PFKFB4-212ENST00000478516 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 LRP6O75581 1613 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 SHPRHQ149N8 1683 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 RXRBP28702 533 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms