RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 CPSF1Q10570 1443 aaKnown RBP33.68■■■□□ 2.98
ARF1-208ENST00000478336 SSH2Q76I76 1423 aa33.67■■■□□ 2.98
ARF1-208ENST00000478336 CABLES1Q8TDN4 633 aa33.66■■■□□ 2.98
ARF1-208ENST00000478336 C8orf37Q96NL8 207 aa33.66■■■□□ 2.98
ARF1-208ENST00000478336 TMF1P82094 1093 aa33.65■■■□□ 2.98
ARF1-208ENST00000478336 ILDR2Q71H61 639 aa33.65■■■□□ 2.98
ARF1-208ENST00000478336 CD163L1Q9NR16 1453 aa33.64■■■□□ 2.98
ARF1-208ENST00000478336 AFF2P51816 1311 aa33.64■■■□□ 2.98
ARF1-208ENST00000478336 MON2Q7Z3U7 1717 aa33.64■■■□□ 2.98
ARF1-208ENST00000478336 NRKQ7Z2Y5 1582 aa33.64■■■□□ 2.98
ARF1-208ENST00000478336 ZNF692Q9BU19 519 aaPredicted RBP33.62■■■□□ 2.97
ARF1-208ENST00000478336 ZNF772Q68DY9 489 aaPredicted RBP33.61■■■□□ 2.97
ARF1-208ENST00000478336 POTEAQ6S8J7 498 aa33.61■■■□□ 2.97
ARF1-208ENST00000478336 NINLQ9Y2I6 1382 aa33.6■■■□□ 2.97
ARF1-208ENST00000478336 EIF4G2P78344 907 aaKnown RBP eCLIP33.6■■■□□ 2.976e-6■□□□□ 8.5
ARF1-208ENST00000478336 NGLY1Q96IV0 654 aa33.6■■■□□ 2.97
ARF1-208ENST00000478336 PHRF1Q9P1Y6 1649 aaKnown RBP33.6■■■□□ 2.97
ARF1-208ENST00000478336 PLEKHG5O94827 1062 aa33.59■■■□□ 2.97
ARF1-208ENST00000478336 TMC1Q8TDI8 760 aa33.59■■■□□ 2.97
ARF1-208ENST00000478336 SLC12A5Q9H2X9 1139 aa33.59■■■□□ 2.97
ARF1-208ENST00000478336 HAP1P54257 671 aaPredicted RBP33.58■■■□□ 2.97
ARF1-208ENST00000478336 FNBP4Q8N3X1 1017 aaPredicted RBP33.57■■■□□ 2.96
ARF1-208ENST00000478336 ABTB2Q8N961 1025 aa33.57■■■□□ 2.96
ARF1-208ENST00000478336 PIK3C2AO00443 1686 aa33.57■■■□□ 2.96
ARF1-208ENST00000478336 KTN1Q86UP2 1357 aaKnown RBP33.57■■■□□ 2.96
ARF1-208ENST00000478336 HSPA5P11021 654 aaKnown RBP33.56■■■□□ 2.96
ARF1-208ENST00000478336 NUTM2GQ5VZR2 741 aa33.55■■■□□ 2.96
ARF1-208ENST00000478336 TTC21BQ7Z4L5 1316 aa33.54■■■□□ 2.96
ARF1-208ENST00000478336 CDCA8Q53HL2 280 aa33.54■■■□□ 2.96
ARF1-208ENST00000478336 USP19O94966 1318 aa33.53■■■□□ 2.96
ARF1-208ENST00000478336 A0A1W2PP64 1363 aa33.53■■■□□ 2.96
ARF1-208ENST00000478336 SLIT2O94813 1529 aa33.53■■■□□ 2.96
ARF1-208ENST00000478336 HDGFL2Q7Z4V5 671 aaPredicted RBP33.51■■■□□ 2.95
ARF1-208ENST00000478336 TERF2IPQ9NYB0 399 aa33.51■■■□□ 2.95
ARF1-208ENST00000478336 TTC21AQ8NDW8 1320 aa33.51■■■□□ 2.95
ARF1-208ENST00000478336 BCL9LQ86UU0 1499 aa33.5■■■□□ 2.95
ARF1-208ENST00000478336 PLCH1Q4KWH8 1693 aa33.5■■■□□ 2.95
ARF1-208ENST00000478336 NLRP13Q86W25 1043 aa33.49■■■□□ 2.95
ARF1-208ENST00000478336 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.49■■■□□ 2.95
ARF1-208ENST00000478336 USP21Q9UK80 565 aa33.49■■■□□ 2.95
ARF1-208ENST00000478336 MYOM1P52179 1685 aa33.48■■■□□ 2.95
ARF1-208ENST00000478336 NWD2Q9ULI1 1742 aa33.48■■■□□ 2.95
ARF1-208ENST00000478336 EDC4Q6P2E9 1401 aaKnown RBP33.47■■■□□ 2.95
ARF1-208ENST00000478336 SLIT3O75094 1523 aa33.47■■■□□ 2.95
ARF1-208ENST00000478336 COL14A1Q05707 1796 aaKnown RBP33.46■■■□□ 2.95
ARF1-208ENST00000478336 ANKRD36BQ8N2N9 1353 aa33.46■■■□□ 2.95
ARF1-208ENST00000478336 NLRP6P59044 892 aa33.45■■■□□ 2.95
ARF1-208ENST00000478336 FAM83GA6ND36 823 aa33.44■■■□□ 2.94
ARF1-208ENST00000478336 USP54Q70EL1 1684 aa33.44■■■□□ 2.94
ARF1-208ENST00000478336 ATRNO75882 1429 aa33.44■■■□□ 2.94
ARF1-208ENST00000478336 QTRT2Q9H974 415 aaKnown RBP33.42■■■□□ 2.94
ARF1-208ENST00000478336 KIAA0232Q92628 1395 aa33.42■■■□□ 2.94
ARF1-208ENST00000478336 NRAPQ86VF7 1730 aa33.4■■■□□ 2.94
ARF1-208ENST00000478336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.4■■■□□ 2.947e-7■■□□□ 13.6
ARF1-208ENST00000478336 TRPC5Q9UL62 973 aaPredicted RBP33.4■■■□□ 2.94
ARF1-208ENST00000478336 CPDO75976 1380 aa33.39■■■□□ 2.94
ARF1-208ENST00000478336 USP31Q70CQ4 1352 aa33.39■■■□□ 2.94
ARF1-208ENST00000478336 GCP02774 474 aa33.39■■■□□ 2.94
ARF1-208ENST00000478336 UNC5CLQ8IV45 518 aa33.39■■■□□ 2.94
ARF1-208ENST00000478336 PRDM11Q9NQV5 511 aa33.39■■■□□ 2.94
ARF1-208ENST00000478336 RXRBP28702 533 aa33.37■■■□□ 2.93
ARF1-208ENST00000478336 ZC3H6P61129 1189 aaKnown RBP33.37■■■□□ 2.93
ARF1-208ENST00000478336 NME9Q86XW9 330 aa33.36■■■□□ 2.93
ARF1-208ENST00000478336 CDK12Q9NYV4 1490 aaPredicted RBP33.36■■■□□ 2.93
ARF1-208ENST00000478336 RBM6P78332 1123 aaKnown RBP33.35■■■□□ 2.93
ARF1-208ENST00000478336 BTG4Q9NY30 223 aa33.33■■■□□ 2.93
ARF1-208ENST00000478336 ZRANB1Q9UGI0 708 aa33.33■■■□□ 2.93
ARF1-208ENST00000478336 LMO7Q8WWI1 1683 aa33.33■■■□□ 2.93
ARF1-208ENST00000478336 OVOS2A0A0J9YW53 1432 aa33.32■■■□□ 2.92
ARF1-208ENST00000478336 OVOS2Q6IE36 1432 aa33.32■■■□□ 2.92
ARF1-208ENST00000478336 NFAT5O94916 1531 aa33.32■■■□□ 2.92
ARF1-208ENST00000478336 CHRNA2Q15822 529 aa33.31■■■□□ 2.92
ARF1-208ENST00000478336 C11orf95C9JLR9 678 aaPredicted RBP33.3■■■□□ 2.92
ARF1-208ENST00000478336 KCNH5Q8NCM2 988 aa33.29■■■□□ 2.92
ARF1-208ENST00000478336 GLI3P10071 1580 aa33.29■■■□□ 2.92
ARF1-208ENST00000478336 VPS72Q15906 364 aa33.28■■■□□ 2.92
ARF1-208ENST00000478336 POLR3GLQ9BT43 218 aa33.28■■■□□ 2.92
ARF1-208ENST00000478336 GJD4Q96KN9 370 aaPredicted RBP33.27■■■□□ 2.92
ARF1-208ENST00000478336 RGS12O14924 1447 aa33.27■■■□□ 2.92
ARF1-208ENST00000478336 CAMTA1Q9Y6Y1 1673 aa33.26■■■□□ 2.91
ARF1-208ENST00000478336 COL18A1P39060 1754 aa33.24■■■□□ 2.91
ARF1-208ENST00000478336 SOCS7O14512 581 aa33.24■■■□□ 2.91
ARF1-208ENST00000478336 CARD14Q9BXL6 1004 aa33.24■■■□□ 2.91
ARF1-208ENST00000478336 NSD3Q9BZ95 1437 aa33.23■■■□□ 2.91
ARF1-208ENST00000478336 KIF20BQ96Q89 1820 aa33.23■■■□□ 2.91
ARF1-208ENST00000478336 AATKQ6ZMQ8 1374 aa33.22■■■□□ 2.91
ARF1-208ENST00000478336 ARHGEF25Q86VW2 580 aa33.22■■■□□ 2.91
ARF1-208ENST00000478336 SOX12O15370 315 aa33.21■■■□□ 2.91
ARF1-208ENST00000478336 KIF7Q2M1P5 1343 aa33.2■■■□□ 2.91
ARF1-208ENST00000478336 FYB1O15117 783 aa33.19■■■□□ 2.9
ARF1-208ENST00000478336 ABCC6O95255 1503 aa33.18■■■□□ 2.9
ARF1-208ENST00000478336 COL5A2P05997 1499 aaPredicted RBP33.18■■■□□ 2.9
ARF1-208ENST00000478336 COG3Q96JB2 828 aa33.17■■■□□ 2.9
ARF1-208ENST00000478336 LTN1O94822 1766 aa33.16■■■□□ 2.9
ARF1-208ENST00000478336 ZBTB7CA1YPR0 619 aa33.16■■■□□ 2.9
ARF1-208ENST00000478336 CCDC9Q9Y3X0 531 aaKnown RBP33.16■■■□□ 2.9
ARF1-208ENST00000478336 SPATA31A5Q5VU36 1347 aa33.15■■■□□ 2.9
ARF1-208ENST00000478336 SPATA31A7Q8IWB4 1347 aa33.15■■■□□ 2.9
ARF1-208ENST00000478336 GGNBP2Q9H3C7 697 aa33.14■■■□□ 2.9
ARF1-208ENST00000478336 STRN4Q9NRL3 753 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms