RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 ACEP12821 1306 aa19.7■□□□□ 0.74
HDAC7-222ENST00000477937 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
HDAC7-222ENST00000477937 NWD2Q9ULI1 1742 aa19.69■□□□□ 0.74
HDAC7-222ENST00000477937 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
HDAC7-222ENST00000477937 PLCH1Q4KWH8 1693 aa19.68■□□□□ 0.74
HDAC7-222ENST00000477937 EVC2Q86UK5 1308 aa19.68■□□□□ 0.74
HDAC7-222ENST00000477937 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
HDAC7-222ENST00000477937 GJD4Q96KN9 370 aaPredicted RBP19.67■□□□□ 0.74
HDAC7-222ENST00000477937 CRYBG1Q9Y4K1 1723 aa19.66■□□□□ 0.74
HDAC7-222ENST00000477937 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
HDAC7-222ENST00000477937 UPF1Q92900 1129 aaKnown RBP eCLIP19.66■□□□□ 0.74
HDAC7-222ENST00000477937 CARD11Q9BXL7 1154 aa19.64■□□□□ 0.73
HDAC7-222ENST00000477937 COL14A1Q05707 1796 aaKnown RBP19.63■□□□□ 0.73
HDAC7-222ENST00000477937 CABP1Q9NZU7 370 aa19.63■□□□□ 0.73
HDAC7-222ENST00000477937 RALGAPBQ86X10 1494 aa19.62■□□□□ 0.73
HDAC7-222ENST00000477937 VPS72Q15906 364 aa19.62■□□□□ 0.73
HDAC7-222ENST00000477937 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
HDAC7-222ENST00000477937 ABTB2Q8N961 1025 aa19.61■□□□□ 0.73
HDAC7-222ENST00000477937 PHRF1Q9P1Y6 1649 aaKnown RBP19.61■□□□□ 0.73
HDAC7-222ENST00000477937 GLI3P10071 1580 aa19.61■□□□□ 0.73
HDAC7-222ENST00000477937 BRD4O60885 1362 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-222ENST00000477937 BTG4Q9NY30 223 aa19.6■□□□□ 0.73
HDAC7-222ENST00000477937 CCDC9Q9Y3X0 531 aaKnown RBP19.6■□□□□ 0.73
HDAC7-222ENST00000477937 PRDM11Q9NQV5 511 aa19.59■□□□□ 0.73
HDAC7-222ENST00000477937 NRAPQ86VF7 1730 aa19.59■□□□□ 0.73
HDAC7-222ENST00000477937 ATAD2Q6PL18 1390 aa19.58■□□□□ 0.73
HDAC7-222ENST00000477937 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
HDAC7-222ENST00000477937 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
HDAC7-222ENST00000477937 BRWD3Q6RI45 1802 aa19.56■□□□□ 0.72
HDAC7-222ENST00000477937 USP6P35125 1406 aa19.56■□□□□ 0.72
HDAC7-222ENST00000477937 AKAP12Q02952 1782 aa19.55■□□□□ 0.72
HDAC7-222ENST00000477937 ZC3H6P61129 1189 aaKnown RBP19.55■□□□□ 0.72
HDAC7-222ENST00000477937 ZNF692Q9BU19 519 aaPredicted RBP19.55■□□□□ 0.72
HDAC7-222ENST00000477937 KIAA0232Q92628 1395 aa19.55■□□□□ 0.72
HDAC7-222ENST00000477937 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
HDAC7-222ENST00000477937 ONECUT3O60422 494 aaPredicted RBP19.53■□□□□ 0.72
HDAC7-222ENST00000477937 CHRNA2Q15822 529 aa19.53■□□□□ 0.72
HDAC7-222ENST00000477937 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
HDAC7-222ENST00000477937 USP19O94966 1318 aa19.52■□□□□ 0.72
HDAC7-222ENST00000477937 NLRP6P59044 892 aa19.52■□□□□ 0.72
HDAC7-222ENST00000477937 NRKQ7Z2Y5 1582 aa19.52■□□□□ 0.71
HDAC7-222ENST00000477937 GCP02774 474 aa19.51■□□□□ 0.71
HDAC7-222ENST00000477937 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
HDAC7-222ENST00000477937 SSH2Q76I76 1423 aa19.5■□□□□ 0.71
HDAC7-222ENST00000477937 CPDO75976 1380 aa19.49■□□□□ 0.71
HDAC7-222ENST00000477937 PIK3C2AO00443 1686 aa19.49■□□□□ 0.71
HDAC7-222ENST00000477937 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
HDAC7-222ENST00000477937 A0A0G2JS52 829 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 SLC24A1O60721 1099 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 EVA1CP58658 441 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 MYT1Q01538 1121 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 FAM98CQ17RN3 349 aaKnown RBP19.48■□□□□ 0.71
HDAC7-222ENST00000477937 STRN4Q9NRL3 753 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 TIMELESSQ9UNS1 1208 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
HDAC7-222ENST00000477937 SPATA31A5Q5VU36 1347 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 TTC21BQ7Z4L5 1316 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 SPATA31A7Q8IWB4 1347 aa19.48■□□□□ 0.71
HDAC7-222ENST00000477937 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
HDAC7-222ENST00000477937 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
HDAC7-222ENST00000477937 MON2Q7Z3U7 1717 aa19.47■□□□□ 0.71
HDAC7-222ENST00000477937 TTC21AQ8NDW8 1320 aa19.47■□□□□ 0.71
HDAC7-222ENST00000477937 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
HDAC7-222ENST00000477937 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
HDAC7-222ENST00000477937 PUS7Q96PZ0 661 aaKnown RBP19.46■□□□□ 0.71
HDAC7-222ENST00000477937 LMO7Q8WWI1 1683 aa19.45■□□□□ 0.7
HDAC7-222ENST00000477937 CAMTA1Q9Y6Y1 1673 aa19.45■□□□□ 0.7
HDAC7-222ENST00000477937 SLIT3O75094 1523 aa19.45■□□□□ 0.7
HDAC7-222ENST00000477937 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
HDAC7-222ENST00000477937 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
HDAC7-222ENST00000477937 TESK2Q96S53 571 aa19.43■□□□□ 0.7
HDAC7-222ENST00000477937 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
HDAC7-222ENST00000477937 EP400Q96L91 3159 aa19.42■□□□□ 0.7
HDAC7-222ENST00000477937 ZBTB7CA1YPR0 619 aa19.42■□□□□ 0.7
HDAC7-222ENST00000477937 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
HDAC7-222ENST00000477937 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
HDAC7-222ENST00000477937 CD163L1Q9NR16 1453 aa19.41■□□□□ 0.7
HDAC7-222ENST00000477937 LARP1Q6PKG0 1096 aaKnown RBP19.4■□□□□ 0.7
HDAC7-222ENST00000477937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.7
HDAC7-222ENST00000477937 USP35Q9P2H5 1018 aa19.4■□□□□ 0.7
HDAC7-222ENST00000477937 THSD7AQ9UPZ6 1657 aa19.4■□□□□ 0.7
HDAC7-222ENST00000477937 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
HDAC7-222ENST00000477937 USP47Q96K76 1375 aa19.39■□□□□ 0.69
HDAC7-222ENST00000477937 BLMP54132 1417 aaPredicted RBP19.39■□□□□ 0.69
HDAC7-222ENST00000477937 COL18A1P39060 1754 aa19.38■□□□□ 0.69
HDAC7-222ENST00000477937 SF3B2Q13435 895 aaKnown RBP19.38■□□□□ 0.69
HDAC7-222ENST00000477937 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
HDAC7-222ENST00000477937 RGPD5Q99666 1765 aa19.38■□□□□ 0.69
HDAC7-222ENST00000477937 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
HDAC7-222ENST00000477937 NINLQ9Y2I6 1382 aa19.37■□□□□ 0.69
HDAC7-222ENST00000477937 SOX12O15370 315 aa19.37■□□□□ 0.69
HDAC7-222ENST00000477937 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
HDAC7-222ENST00000477937 EDC4Q6P2E9 1401 aaKnown RBP19.36■□□□□ 0.69
HDAC7-222ENST00000477937 TMF1P82094 1093 aa19.36■□□□□ 0.69
HDAC7-222ENST00000477937 ARHGEF25Q86VW2 580 aa19.36■□□□□ 0.69
HDAC7-222ENST00000477937 TCP11L2Q8N4U5 519 aa19.36■□□□□ 0.69
HDAC7-222ENST00000477937 THRAP3Q9Y2W1 955 aaKnown RBP19.36■□□□□ 0.69
HDAC7-222ENST00000477937 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
HDAC7-222ENST00000477937 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
HDAC7-222ENST00000477937 USP31Q70CQ4 1352 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms