RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 EDC4Q6P2E9 1401 aaKnown RBP27.61■■■□□ 2.01
ACTB-210ENST00000477812 ALS2Q96Q42 1657 aa27.61■■■□□ 2.01
ACTB-210ENST00000477812 TNS3Q68CZ2 1445 aa27.6■■■□□ 2.01
ACTB-210ENST00000477812 ZNF316A6NFI3 1004 aaPredicted RBP27.6■■■□□ 2.01
ACTB-210ENST00000477812 CARD14Q9BXL6 1004 aa27.6■■■□□ 2.01
ACTB-210ENST00000477812 SPATA31A3Q5VYP0 1347 aa27.59■■■□□ 2.01
ACTB-210ENST00000477812 PANK3Q9H999 370 aa27.57■■■□□ 2
ACTB-210ENST00000477812 TTC21BQ7Z4L5 1316 aa27.56■■■□□ 2
ACTB-210ENST00000477812 PIK3C2AO00443 1686 aa27.56■■■□□ 2
ACTB-210ENST00000477812 LRRC59Q96AG4 307 aaKnown RBP27.55■■■□□ 2
ACTB-210ENST00000477812 NSD3Q9BZ95 1437 aa27.55■■■□□ 2
ACTB-210ENST00000477812 PNPLA6Q8IY17 1366 aa27.53■■■□□ 2
ACTB-210ENST00000477812 TTC21AQ8NDW8 1320 aa27.53■■■□□ 2
ACTB-210ENST00000477812 SHPRHQ149N8 1683 aa27.52■■■□□ 2
ACTB-210ENST00000477812 COL22A1Q8NFW1 1626 aaPredicted RBP27.52■■■□□ 2
ACTB-210ENST00000477812 MED1Q15648 1581 aaPredicted RBP27.52■■■□□ 2
ACTB-210ENST00000477812 ARHGEF10O15013 1369 aa27.51■■□□□ 1.99
ACTB-210ENST00000477812 PAK3O75914 559 aaPredicted RBP27.5■■□□□ 1.99
ACTB-210ENST00000477812 MARF1Q9Y4F3 1742 aaKnown RBP27.5■■□□□ 1.99
ACTB-210ENST00000477812 USP54Q70EL1 1684 aa27.49■■□□□ 1.99
ACTB-210ENST00000477812 JCADQ9P266 1359 aa27.49■■□□□ 1.99
ACTB-210ENST00000477812 PER1O15534 1290 aaPredicted RBP27.49■■□□□ 1.99
ACTB-210ENST00000477812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.48■■□□□ 1.99
ACTB-210ENST00000477812 CRYBG1Q9Y4K1 1723 aa27.47■■□□□ 1.99
ACTB-210ENST00000477812 NME9Q86XW9 330 aa27.47■■□□□ 1.99
ACTB-210ENST00000477812 USP31Q70CQ4 1352 aa27.47■■□□□ 1.99
ACTB-210ENST00000477812 ILDR1Q86SU0 546 aaPredicted RBP27.46■■□□□ 1.99
ACTB-210ENST00000477812 OVOS2A0A0J9YW53 1432 aa27.46■■□□□ 1.99
ACTB-210ENST00000477812 OVOS2Q6IE36 1432 aa27.46■■□□□ 1.99
ACTB-210ENST00000477812 ABTB2Q8N961 1025 aa27.45■■□□□ 1.98
ACTB-210ENST00000477812 KIF20BQ96Q89 1820 aa27.45■■□□□ 1.98
ACTB-210ENST00000477812 ABCA3Q99758 1704 aa27.44■■□□□ 1.98
ACTB-210ENST00000477812 USP19O94966 1318 aa27.44■■□□□ 1.98
ACTB-210ENST00000477812 FYB1O15117 783 aa27.43■■□□□ 1.98
ACTB-210ENST00000477812 DDX10Q13206 875 aaKnown RBP27.43■■□□□ 1.98
ACTB-210ENST00000477812 ZRANB1Q9UGI0 708 aa27.43■■□□□ 1.98
ACTB-210ENST00000477812 SLIT3O75094 1523 aa27.42■■□□□ 1.98
ACTB-210ENST00000477812 AMER1Q5JTC6 1135 aaPredicted RBP27.42■■□□□ 1.98
ACTB-210ENST00000477812 LMOD2Q6P5Q4 547 aa27.42■■□□□ 1.98
ACTB-210ENST00000477812 CGNL1Q0VF96 1302 aa27.41■■□□□ 1.98
ACTB-210ENST00000477812 NUTM2GQ5VZR2 741 aa27.41■■□□□ 1.98
ACTB-210ENST00000477812 PHRF1Q9P1Y6 1649 aaKnown RBP27.4■■□□□ 1.98
ACTB-210ENST00000477812 NLRP6P59044 892 aa27.39■■□□□ 1.98
ACTB-210ENST00000477812 KNSTRNQ9Y448 316 aa27.39■■□□□ 1.98
ACTB-210ENST00000477812 NLRP13Q86W25 1043 aa27.38■■□□□ 1.97
ACTB-210ENST00000477812 NSD2O96028 1365 aa27.37■■□□□ 1.97
ACTB-210ENST00000477812 NPC1L1Q9UHC9 1359 aa27.37■■□□□ 1.97
ACTB-210ENST00000477812 GGNBP2Q9H3C7 697 aa27.37■■□□□ 1.97
ACTB-210ENST00000477812 ANKRD26Q9UPS8 1709 aa27.37■■□□□ 1.97
ACTB-210ENST00000477812 SPATA31A6Q5VVP1 1343 aa27.37■■□□□ 1.97
ACTB-210ENST00000477812 CABLES1Q8TDN4 633 aa27.36■■□□□ 1.97
ACTB-210ENST00000477812 LRP6O75581 1613 aa27.35■■□□□ 1.97
ACTB-210ENST00000477812 NFAT5O94916 1531 aa27.35■■□□□ 1.97
ACTB-210ENST00000477812 COG3Q96JB2 828 aa27.32■■□□□ 1.96
ACTB-210ENST00000477812 GCP02774 474 aa27.3■■□□□ 1.96
ACTB-210ENST00000477812 PLEKHG5O94827 1062 aa27.28■■□□□ 1.96
ACTB-210ENST00000477812 CPDO75976 1380 aa27.26■■□□□ 1.95
ACTB-210ENST00000477812 KCNH5Q8NCM2 988 aa27.26■■□□□ 1.95
ACTB-210ENST00000477812 NUTM2BA6NNL0 878 aaPredicted RBP27.25■■□□□ 1.95
ACTB-210ENST00000477812 NUTM2EB1AL46 878 aaPredicted RBP27.25■■□□□ 1.95
ACTB-210ENST00000477812 CC2D1BQ5T0F9 858 aaKnown RBP27.25■■□□□ 1.95
ACTB-210ENST00000477812 NUTM2AQ8IVF1 878 aaPredicted RBP27.25■■□□□ 1.95
ACTB-210ENST00000477812 AATKQ6ZMQ8 1374 aa27.22■■□□□ 1.95
ACTB-210ENST00000477812 KIAA0232Q92628 1395 aa27.22■■□□□ 1.95
ACTB-210ENST00000477812 SOX12O15370 315 aa27.21■■□□□ 1.95
ACTB-210ENST00000477812 HAP1P54257 671 aaPredicted RBP27.21■■□□□ 1.95
ACTB-210ENST00000477812 ARHGEF25Q86VW2 580 aa27.21■■□□□ 1.95
ACTB-210ENST00000477812 ADAMTS2O95450 1211 aa27.2■■□□□ 1.94
ACTB-210ENST00000477812 FBLN1P23142 703 aa27.2■■□□□ 1.94
ACTB-210ENST00000477812 ZC3H6P61129 1189 aaKnown RBP27.2■■□□□ 1.94
ACTB-210ENST00000477812 MORC1Q86VD1 984 aa27.2■■□□□ 1.94
ACTB-210ENST00000477812 PARD3Q8TEW0 1356 aa27.2■■□□□ 1.94
ACTB-210ENST00000477812 LMO7Q8WWI1 1683 aa27.18■■□□□ 1.94
ACTB-210ENST00000477812 LTN1O94822 1766 aa27.18■■□□□ 1.94
ACTB-210ENST00000477812 COL18A1P39060 1754 aa27.18■■□□□ 1.94
ACTB-210ENST00000477812 ABCC6O95255 1503 aa27.18■■□□□ 1.94
ACTB-210ENST00000477812 COL14A1Q05707 1796 aaKnown RBP27.17■■□□□ 1.94
ACTB-210ENST00000477812 MAP3K19Q56UN5 1328 aa27.16■■□□□ 1.94
ACTB-210ENST00000477812 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
ACTB-210ENST00000477812 FAM83GA6ND36 823 aa27.16■■□□□ 1.94
ACTB-210ENST00000477812 PEAK1Q9H792 1746 aa27.16■■□□□ 1.94
ACTB-210ENST00000477812 PRDM11Q9NQV5 511 aa27.15■■□□□ 1.94
ACTB-210ENST00000477812 TNNT2P45379 298 aaPredicted RBP27.14■■□□□ 1.94
ACTB-210ENST00000477812 CNGB1Q14028 1251 aaPredicted RBP27.14■■□□□ 1.94
ACTB-210ENST00000477812 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
ACTB-210ENST00000477812 SLIT2O94813 1529 aa27.14■■□□□ 1.94
ACTB-210ENST00000477812 PLCH1Q4KWH8 1693 aa27.14■■□□□ 1.93
ACTB-210ENST00000477812 CHRNA2Q15822 529 aa27.12■■□□□ 1.93
ACTB-210ENST00000477812 POLKQ9UBT6 870 aa27.12■■□□□ 1.93
ACTB-210ENST00000477812 CAMTA1Q9Y6Y1 1673 aa27.11■■□□□ 1.93
ACTB-210ENST00000477812 RTL1A6NKG5 1358 aa27.11■■□□□ 1.93
ACTB-210ENST00000477812 KIF24Q5T7B8 1368 aa27.11■■□□□ 1.93
ACTB-210ENST00000477812 EMILIN1Q9Y6C2 1016 aa27.11■■□□□ 1.93
ACTB-210ENST00000477812 MAP2P11137 1827 aaKnown RBP27.11■■□□□ 1.93
ACTB-210ENST00000477812 C8orf37Q96NL8 207 aa27.1■■□□□ 1.93
ACTB-210ENST00000477812 NRAPQ86VF7 1730 aa27.1■■□□□ 1.93
ACTB-210ENST00000477812 NWD2Q9ULI1 1742 aa27.1■■□□□ 1.93
ACTB-210ENST00000477812 MEX3CQ5U5Q3 659 aaKnown RBP27.09■■□□□ 1.93
ACTB-210ENST00000477812 FNBP4Q8N3X1 1017 aaPredicted RBP27.09■■□□□ 1.93
ACTB-210ENST00000477812 PRKRIP1Q9H875 184 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms