RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
CMC1-209ENST00000477739 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
CMC1-209ENST00000477739 CEP152O94986 1710 aa12.25□□□□□ -0.45
CMC1-209ENST00000477739 TRAK2O60296 914 aa12.25□□□□□ -0.45
CMC1-209ENST00000477739 TRIM27P14373 513 aa12.25□□□□□ -0.45
CMC1-209ENST00000477739 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
CMC1-209ENST00000477739 CDK19Q9BWU1 502 aa12.25□□□□□ -0.45
CMC1-209ENST00000477739 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
CMC1-209ENST00000477739 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
CMC1-209ENST00000477739 KIF1BO60333 1816 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 PRKAR2BP31323 418 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 WAPLQ7Z5K2 1190 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 SBNO2Q9Y2G9 1366 aa12.24□□□□□ -0.45
CMC1-209ENST00000477739 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
CMC1-209ENST00000477739 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
CMC1-209ENST00000477739 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
CMC1-209ENST00000477739 PPRC1Q5VV67 1664 aaKnown RBP12.23□□□□□ -0.45
CMC1-209ENST00000477739 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
CMC1-209ENST00000477739 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
CMC1-209ENST00000477739 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
CMC1-209ENST00000477739 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
CMC1-209ENST00000477739 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
CMC1-209ENST00000477739 KIDINS220Q9ULH0 1771 aa12.22□□□□□ -0.45
CMC1-209ENST00000477739 MVPQ14764 893 aaKnown RBP12.22□□□□□ -0.45
CMC1-209ENST00000477739 YEATS2Q9ULM3 1422 aa12.22□□□□□ -0.45
CMC1-209ENST00000477739 TSHZ3Q63HK5 1081 aa12.22□□□□□ -0.45
CMC1-209ENST00000477739 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
CMC1-209ENST00000477739 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
CMC1-209ENST00000477739 VWDEQ8N2E2 1590 aa12.21□□□□□ -0.45
CMC1-209ENST00000477739 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.45
CMC1-209ENST00000477739 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
CMC1-209ENST00000477739 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
CMC1-209ENST00000477739 KRT24Q2M2I5 525 aa12.21□□□□□ -0.45
CMC1-209ENST00000477739 MCM4P33991 863 aa12.21□□□□□ -0.46
CMC1-209ENST00000477739 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.46
CMC1-209ENST00000477739 FYB1O15117 783 aa12.2□□□□□ -0.46
CMC1-209ENST00000477739 SMARCA5O60264 1052 aaPredicted RBP12.2□□□□□ -0.46
CMC1-209ENST00000477739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.2□□□□□ -0.46
CMC1-209ENST00000477739 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
CMC1-209ENST00000477739 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
CMC1-209ENST00000477739 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
CMC1-209ENST00000477739 NUTM2GQ5VZR2 741 aa12.2□□□□□ -0.46
CMC1-209ENST00000477739 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
CMC1-209ENST00000477739 MROH1Q8NDA8 1641 aa12.2□□□□□ -0.46
CMC1-209ENST00000477739 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
CMC1-209ENST00000477739 TMPOP42166 694 aaKnown RBP12.19□□□□□ -0.46
CMC1-209ENST00000477739 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
CMC1-209ENST00000477739 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
CMC1-209ENST00000477739 ABCC3O15438 1527 aa12.19□□□□□ -0.46
CMC1-209ENST00000477739 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 ADGRB3O60242 1522 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 TSPYL6Q8N831 410 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
CMC1-209ENST00000477739 CHMP5Q9NZZ3 219 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
CMC1-209ENST00000477739 USP19O94966 1318 aa12.17□□□□□ -0.46
CMC1-209ENST00000477739 TBC1D32Q96NH3 1257 aa12.17□□□□□ -0.46
CMC1-209ENST00000477739 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
CMC1-209ENST00000477739 DDX19BQ9UMR2 479 aa12.17□□□□□ -0.46
CMC1-209ENST00000477739 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
CMC1-209ENST00000477739 RBM10P98175 930 aaKnown RBP12.16□□□□□ -0.46
CMC1-209ENST00000477739 NEO1Q92859 1461 aa12.16□□□□□ -0.46
CMC1-209ENST00000477739 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
CMC1-209ENST00000477739 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
CMC1-209ENST00000477739 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
CMC1-209ENST00000477739 SSFA2P28290 1259 aa12.15□□□□□ -0.46
CMC1-209ENST00000477739 NSD2O96028 1365 aa12.15□□□□□ -0.46
CMC1-209ENST00000477739 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
CMC1-209ENST00000477739 PUS7Q96PZ0 661 aaKnown RBP12.15□□□□□ -0.46
CMC1-209ENST00000477739 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
CMC1-209ENST00000477739 RILPL2Q969X0 211 aa12.14□□□□□ -0.47
CMC1-209ENST00000477739 GOLGA6L22H0YM25 854 aa12.14□□□□□ -0.47
CMC1-209ENST00000477739 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
CMC1-209ENST00000477739 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
CMC1-209ENST00000477739 NRXN1Q9ULB1 1477 aa12.14□□□□□ -0.47
CMC1-209ENST00000477739 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
CMC1-209ENST00000477739 MAP4K4O95819 1239 aaPredicted RBP12.13□□□□□ -0.47
CMC1-209ENST00000477739 HDGFP51858 240 aaKnown RBP12.13□□□□□ -0.47
CMC1-209ENST00000477739 CCDC27Q2M243 656 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
CMC1-209ENST00000477739 KIAA1210Q9ULL0 1709 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 COG3Q96JB2 828 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
CMC1-209ENST00000477739 NME9Q86XW9 330 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
CMC1-209ENST00000477739 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
CMC1-209ENST00000477739 MYOM1P52179 1685 aa12.13□□□□□ -0.47
CMC1-209ENST00000477739 MCM10Q7L590 875 aa12.12□□□□□ -0.47
CMC1-209ENST00000477739 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
CMC1-209ENST00000477739 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms