RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 NGLY1Q96IV0 654 aa31.59■■■□□ 2.65
SF1-214ENST00000477596 ZNF772Q68DY9 489 aaPredicted RBP31.58■■■□□ 2.65
SF1-214ENST00000477596 ATAD2Q6PL18 1390 aa31.57■■■□□ 2.64
SF1-214ENST00000477596 HAP1P54257 671 aaPredicted RBP31.55■■■□□ 2.64
SF1-214ENST00000477596 USP6P35125 1406 aa31.55■■■□□ 2.64
SF1-214ENST00000477596 AKAP12Q02952 1782 aa31.54■■■□□ 2.64
SF1-214ENST00000477596 NUTM2GQ5VZR2 741 aa31.53■■■□□ 2.64
SF1-214ENST00000477596 PHRF1Q9P1Y6 1649 aaKnown RBP31.52■■■□□ 2.64
SF1-214ENST00000477596 FNBP4Q8N3X1 1017 aaPredicted RBP31.5■■■□□ 2.63
SF1-214ENST00000477596 USP21Q9UK80 565 aa31.49■■■□□ 2.63
SF1-214ENST00000477596 PLCH1Q4KWH8 1693 aa31.48■■■□□ 2.63
SF1-214ENST00000477596 NRKQ7Z2Y5 1582 aa31.48■■■□□ 2.63
SF1-214ENST00000477596 SSH2Q76I76 1423 aa31.48■■■□□ 2.63
SF1-214ENST00000477596 BCL9LQ86UU0 1499 aa31.47■■■□□ 2.63
SF1-214ENST00000477596 CD163L1Q9NR16 1453 aa31.46■■■□□ 2.63
SF1-214ENST00000477596 SLIT2O94813 1529 aa31.46■■■□□ 2.63
SF1-214ENST00000477596 CPSF1Q10570 1443 aaKnown RBP31.46■■■□□ 2.63
SF1-214ENST00000477596 MON2Q7Z3U7 1717 aa31.46■■■□□ 2.63
SF1-214ENST00000477596 PIK3C2AO00443 1686 aa31.45■■■□□ 2.63
SF1-214ENST00000477596 ABTB2Q8N961 1025 aa31.45■■■□□ 2.63
SF1-214ENST00000477596 SOCS7O14512 581 aa31.44■■■□□ 2.62
SF1-214ENST00000477596 TMC1Q8TDI8 760 aa31.44■■■□□ 2.62
SF1-214ENST00000477596 QTRT2Q9H974 415 aaKnown RBP31.44■■■□□ 2.62
SF1-214ENST00000477596 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.43■■■□□ 2.62
SF1-214ENST00000477596 BRD4O60885 1362 aaPredicted RBP31.43■■■□□ 2.62
SF1-214ENST00000477596 ATRNO75882 1429 aa31.42■■■□□ 2.62
SF1-214ENST00000477596 SLC12A5Q9H2X9 1139 aa31.42■■■□□ 2.62
SF1-214ENST00000477596 KTN1Q86UP2 1357 aaKnown RBP31.41■■■□□ 2.62
SF1-214ENST00000477596 FAM83GA6ND36 823 aa31.4■■■□□ 2.62
SF1-214ENST00000477596 RXRBP28702 533 aa31.4■■■□□ 2.62
SF1-214ENST00000477596 USP19O94966 1318 aa31.4■■■□□ 2.62
SF1-214ENST00000477596 PUS7Q96PZ0 661 aaKnown RBP31.39■■■□□ 2.62
SF1-214ENST00000477596 NWD2Q9ULI1 1742 aa31.38■■■□□ 2.61
SF1-214ENST00000477596 COL14A1Q05707 1796 aaKnown RBP31.38■■■□□ 2.61
SF1-214ENST00000477596 TTC21BQ7Z4L5 1316 aa31.38■■■□□ 2.61
SF1-214ENST00000477596 TMF1P82094 1093 aa31.37■■■□□ 2.61
SF1-214ENST00000477596 ZNF692Q9BU19 519 aaPredicted RBP31.37■■■□□ 2.61
SF1-214ENST00000477596 TRPC5Q9UL62 973 aaPredicted RBP31.37■■■□□ 2.61
SF1-214ENST00000477596 NRAPQ86VF7 1730 aa31.37■■■□□ 2.61
SF1-214ENST00000477596 A0A1W2PP64 1363 aa31.36■■■□□ 2.61
SF1-214ENST00000477596 KIAA0232Q92628 1395 aa31.36■■■□□ 2.61
SF1-214ENST00000477596 UNC5CLQ8IV45 518 aa31.35■■■□□ 2.61
SF1-214ENST00000477596 RGS12O14924 1447 aa31.34■■■□□ 2.61
SF1-214ENST00000477596 RBM6P78332 1123 aaKnown RBP31.34■■■□□ 2.61
SF1-214ENST00000477596 NLRP6P59044 892 aa31.33■■■□□ 2.61
SF1-214ENST00000477596 ZC3H6P61129 1189 aaKnown RBP31.33■■■□□ 2.61
SF1-214ENST00000477596 NLRP13Q86W25 1043 aa31.33■■■□□ 2.61
SF1-214ENST00000477596 PRDM11Q9NQV5 511 aa31.33■■■□□ 2.61
SF1-214ENST00000477596 SLIT3O75094 1523 aa31.33■■■□□ 2.61
SF1-214ENST00000477596 SLC24A1O60721 1099 aa31.32■■■□□ 2.6
SF1-214ENST00000477596 CDK12Q9NYV4 1490 aaPredicted RBP31.32■■■□□ 2.6
SF1-214ENST00000477596 HSPA5P11021 654 aaKnown RBP31.31■■■□□ 2.6
SF1-214ENST00000477596 CHRNA2Q15822 529 aa31.31■■■□□ 2.6
SF1-214ENST00000477596 HDGFL2Q7Z4V5 671 aaPredicted RBP31.31■■■□□ 2.6
SF1-214ENST00000477596 GLI3P10071 1580 aa31.3■■■□□ 2.6
SF1-214ENST00000477596 TTC21AQ8NDW8 1320 aa31.3■■■□□ 2.6
SF1-214ENST00000477596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.3■■■□□ 2.6
SF1-214ENST00000477596 NINLQ9Y2I6 1382 aa31.3■■■□□ 2.6
SF1-214ENST00000477596 MYOM1P52179 1685 aa31.29■■■□□ 2.6
SF1-214ENST00000477596 BTG4Q9NY30 223 aa31.29■■■□□ 2.6
SF1-214ENST00000477596 EIF4G2P78344 907 aaKnown RBP eCLIP31.28■■■□□ 2.61e-7■■□□□ 12.5
SF1-214ENST00000477596 TERF2IPQ9NYB0 399 aa31.28■■■□□ 2.6
SF1-214ENST00000477596 ZRANB1Q9UGI0 708 aa31.28■■■□□ 2.6
SF1-214ENST00000477596 EDC4Q6P2E9 1401 aaKnown RBP31.27■■■□□ 2.6
SF1-214ENST00000477596 GCP02774 474 aa31.27■■■□□ 2.6
SF1-214ENST00000477596 NME9Q86XW9 330 aa31.26■■■□□ 2.59
SF1-214ENST00000477596 GJD4Q96KN9 370 aaPredicted RBP31.26■■■□□ 2.59
SF1-214ENST00000477596 CPDO75976 1380 aa31.25■■■□□ 2.59
SF1-214ENST00000477596 USP54Q70EL1 1684 aa31.24■■■□□ 2.59
SF1-214ENST00000477596 LMO7Q8WWI1 1683 aa31.24■■■□□ 2.59
SF1-214ENST00000477596 ANKRD36BQ8N2N9 1353 aa31.23■■■□□ 2.59
SF1-214ENST00000477596 VPS72Q15906 364 aa31.23■■■□□ 2.59
SF1-214ENST00000477596 SOX12O15370 315 aa31.21■■■□□ 2.59
SF1-214ENST00000477596 CDCA8Q53HL2 280 aa31.21■■■□□ 2.59
SF1-214ENST00000477596 NFAT5O94916 1531 aa31.2■■■□□ 2.59
SF1-214ENST00000477596 CAMTA1Q9Y6Y1 1673 aa31.2■■■□□ 2.59
SF1-214ENST00000477596 ZBTB7CA1YPR0 619 aa31.2■■■□□ 2.59
SF1-214ENST00000477596 CCDC9Q9Y3X0 531 aaKnown RBP31.2■■■□□ 2.59
SF1-214ENST00000477596 USP31Q70CQ4 1352 aa31.19■■■□□ 2.58
SF1-214ENST00000477596 POLR3GLQ9BT43 218 aa31.16■■■□□ 2.58
SF1-214ENST00000477596 STRN4Q9NRL3 753 aa31.16■■■□□ 2.58
SF1-214ENST00000477596 OVOS2A0A0J9YW53 1432 aa31.15■■■□□ 2.58
SF1-214ENST00000477596 OVOS2Q6IE36 1432 aa31.15■■■□□ 2.58
SF1-214ENST00000477596 COL18A1P39060 1754 aa31.15■■■□□ 2.58
SF1-214ENST00000477596 SPATA31A5Q5VU36 1347 aa31.11■■■□□ 2.57
SF1-214ENST00000477596 SPATA31A7Q8IWB4 1347 aa31.11■■■□□ 2.57
SF1-214ENST00000477596 KCNH5Q8NCM2 988 aa31.11■■■□□ 2.57
SF1-214ENST00000477596 COL5A2P05997 1499 aaPredicted RBP31.1■■■□□ 2.57
SF1-214ENST00000477596 AATKQ6ZMQ8 1374 aa31.1■■■□□ 2.57
SF1-214ENST00000477596 C11orf95C9JLR9 678 aaPredicted RBP31.09■■■□□ 2.57
SF1-214ENST00000477596 ARHGEF25Q86VW2 580 aa31.09■■■□□ 2.57
SF1-214ENST00000477596 BRWD3Q6RI45 1802 aa31.09■■■□□ 2.57
SF1-214ENST00000477596 RGPD5Q99666 1765 aa31.07■■■□□ 2.56
SF1-214ENST00000477596 CARD14Q9BXL6 1004 aa31.07■■■□□ 2.56
SF1-214ENST00000477596 KIF20BQ96Q89 1820 aa31.07■■■□□ 2.56
SF1-214ENST00000477596 LTN1O94822 1766 aa31.07■■■□□ 2.56
SF1-214ENST00000477596 NSD3Q9BZ95 1437 aa31.07■■■□□ 2.56
SF1-214ENST00000477596 FAM98CQ17RN3 349 aaKnown RBP31.06■■■□□ 2.56
SF1-214ENST00000477596 LARP1Q6PKG0 1096 aaKnown RBP31.06■■■□□ 2.56
SF1-214ENST00000477596 SPATA31A1Q5TZJ5 1347 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms