RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
RBM39-231ENST00000477334 LILRB3O75022 631 aa8.9□□□□□ -0.98
RBM39-231ENST00000477334 HRCP23327 699 aa8.9□□□□□ -0.98
RBM39-231ENST00000477334 CTC1Q2NKJ3 1217 aa8.9□□□□□ -0.98
RBM39-231ENST00000477334 ZBTB3Q9H5J0 574 aa8.9□□□□□ -0.98
RBM39-231ENST00000477334 SMPD1P17405 629 aa8.89□□□□□ -0.99
RBM39-231ENST00000477334 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
RBM39-231ENST00000477334 EVA1BQ9NVM1 165 aa8.89□□□□□ -0.99
RBM39-231ENST00000477334 AXIN1O15169 862 aa8.88□□□□□ -0.99
RBM39-231ENST00000477334 RFC5P40937 340 aa8.88□□□□□ -0.99
RBM39-231ENST00000477334 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
RBM39-231ENST00000477334 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
RBM39-231ENST00000477334 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
RBM39-231ENST00000477334 POTECB2RU33 542 aa8.87□□□□□ -0.99
RBM39-231ENST00000477334 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
RBM39-231ENST00000477334 J3QL48 77 aa8.87□□□□□ -0.99
RBM39-231ENST00000477334 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
RBM39-231ENST00000477334 PPP2R2DQ66LE6 453 aa8.87□□□□□ -0.99
RBM39-231ENST00000477334 SH3BP2P78314 561 aa8.86□□□□□ -0.99
RBM39-231ENST00000477334 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
RBM39-231ENST00000477334 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
RBM39-231ENST00000477334 DACH1Q9UI36 760 aa8.85□□□□□ -0.99
RBM39-231ENST00000477334 TSC1Q92574 1164 aa8.84□□□□□ -0.99
RBM39-231ENST00000477334 SIAH2O43255 324 aa8.83□□□□□ -1
RBM39-231ENST00000477334 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
RBM39-231ENST00000477334 AP1G2O75843 785 aa8.82□□□□□ -1
RBM39-231ENST00000477334 ALDH1A1P00352 501 aa8.82□□□□□ -1
RBM39-231ENST00000477334 CTHP32929 405 aa8.82□□□□□ -1
RBM39-231ENST00000477334 LINC01559Q495D7 138 aa8.82□□□□□ -1
RBM39-231ENST00000477334 ZNF511Q8NB15 262 aa8.82□□□□□ -1
RBM39-231ENST00000477334 BAP1Q92560 729 aa8.82□□□□□ -1
RBM39-231ENST00000477334 HPS1Q92902 700 aa8.82□□□□□ -1
RBM39-231ENST00000477334 F12P00748 615 aaPredicted RBP8.81□□□□□ -1
RBM39-231ENST00000477334 TMEM259Q4ZIN3 620 aa8.81□□□□□ -1
RBM39-231ENST00000477334 MAP10Q9P2G4 905 aa8.8□□□□□ -1
RBM39-231ENST00000477334 GMPR2Q9P2T1 348 aaKnown RBP8.8□□□□□ -1
RBM39-231ENST00000477334 CTDSPL2Q05D32 466 aa8.79□□□□□ -1
RBM39-231ENST00000477334 HELBQ8NG08 1087 aaPredicted RBP8.79□□□□□ -1
RBM39-231ENST00000477334 PER1O15534 1290 aaPredicted RBP8.78□□□□□ -1
RBM39-231ENST00000477334 FLIIQ13045 1269 aa8.78□□□□□ -1
RBM39-231ENST00000477334 C14orf37Q86TY3 774 aa8.78□□□□□ -1
RBM39-231ENST00000477334 BANK1Q8NDB2 785 aa8.78□□□□□ -1
RBM39-231ENST00000477334 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
RBM39-231ENST00000477334 SNRKQ9NRH2 765 aa8.78□□□□□ -1
RBM39-231ENST00000477334 USP17L8P0C7I0 530 aa8.77□□□□□ -1.01
RBM39-231ENST00000477334 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
RBM39-231ENST00000477334 MCM6Q14566 821 aa8.77□□□□□ -1.01
RBM39-231ENST00000477334 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
RBM39-231ENST00000477334 TLL2Q9Y6L7 1015 aa8.77□□□□□ -1.01
RBM39-231ENST00000477334 WASF2Q9Y6W5 498 aa8.77□□□□□ -1.01
RBM39-231ENST00000477334 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
RBM39-231ENST00000477334 MPNDQ8N594 471 aa8.75□□□□□ -1.01
RBM39-231ENST00000477334 LRRN4Q8WUT4 740 aa8.75□□□□□ -1.01
RBM39-231ENST00000477334 MTMR14Q8NCE2 650 aa8.73□□□□□ -1.01
RBM39-231ENST00000477334 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
RBM39-231ENST00000477334 HMX1Q9NP08 348 aaPredicted RBP8.73□□□□□ -1.01
RBM39-231ENST00000477334 FAM174AQ8TBP5 190 aa8.72□□□□□ -1.01
RBM39-231ENST00000477334 FOXJ1Q92949 421 aa8.72□□□□□ -1.01
RBM39-231ENST00000477334 TRIM47Q96LD4 638 aa8.72□□□□□ -1.01
RBM39-231ENST00000477334 UBTFP17480 764 aaKnown RBP8.71□□□□□ -1.02
RBM39-231ENST00000477334 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
RBM39-231ENST00000477334 CAPN5O15484 640 aaPredicted RBP8.7□□□□□ -1.02
RBM39-231ENST00000477334 NNTQ13423 1086 aa8.7□□□□□ -1.02
RBM39-231ENST00000477334 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
RBM39-231ENST00000477334 BPHLQ86WA6 291 aaPredicted RBP8.7□□□□□ -1.02
RBM39-231ENST00000477334 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
RBM39-231ENST00000477334 ADH1CP00326 375 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
RBM39-231ENST00000477334 AGERQ15109 404 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 EPS8L1Q8TE68 723 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 POM121Q96HA1 1249 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
RBM39-231ENST00000477334 NR6A1Q15406 480 aa8.68□□□□□ -1.02
RBM39-231ENST00000477334 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
RBM39-231ENST00000477334 BMP1P13497 986 aa8.67□□□□□ -1.02
RBM39-231ENST00000477334 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
RBM39-231ENST00000477334 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
RBM39-231ENST00000477334 TRIM34Q9BYJ4 488 aa8.67□□□□□ -1.02
RBM39-231ENST00000477334 APBB1O00213 710 aa8.66□□□□□ -1.02
RBM39-231ENST00000477334 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
RBM39-231ENST00000477334 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
RBM39-231ENST00000477334 ZMYND15Q9H091 742 aa8.66□□□□□ -1.02
RBM39-231ENST00000477334 GDPD2Q9HCC8 539 aa8.66□□□□□ -1.02
RBM39-231ENST00000477334 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
RBM39-231ENST00000477334 COG6Q9Y2V7 657 aa8.66□□□□□ -1.02
RBM39-231ENST00000477334 RAD21O60216 631 aa8.65□□□□□ -1.02
RBM39-231ENST00000477334 ARID5BQ14865 1188 aa8.65□□□□□ -1.02
RBM39-231ENST00000477334 SH3BP5LQ7L8J4 393 aa8.65□□□□□ -1.02
RBM39-231ENST00000477334 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.029e-13■□□□□ 9.8
RBM39-231ENST00000477334 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
RBM39-231ENST00000477334 SOCS7O14512 581 aa8.64□□□□□ -1.03
RBM39-231ENST00000477334 TIMP2P16035 220 aa8.64□□□□□ -1.03
RBM39-231ENST00000477334 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
RBM39-231ENST00000477334 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
RBM39-231ENST00000477334 NDUFB9Q9Y6M9 179 aa8.64□□□□□ -1.03
RBM39-231ENST00000477334 ABL2P42684 1182 aa8.63□□□□□ -1.03
RBM39-231ENST00000477334 NR5A1Q13285 461 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms