RNA–Protein interactions for RNA: ENST00000477216.1

SKIL-208, Transcript of SKI like proto-oncogene, humanhuman

TSL 4

Gene SKIL, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-208ENST00000477216 ABCA3Q99758 1704 aa35.57■■■■□ 3.29
SKIL-208ENST00000477216 FAM83GA6ND36 823 aa35.57■■■■□ 3.28
SKIL-208ENST00000477216 DLC1Q96QB1 1528 aa35.57■■■■□ 3.28
SKIL-208ENST00000477216 ROCK2O75116 1388 aaKnown RBP35.55■■■■□ 3.28
SKIL-208ENST00000477216 TRAK1Q9UPV9 953 aa35.55■■■■□ 3.28
SKIL-208ENST00000477216 BTG4Q9NY30 223 aa35.52■■■■□ 3.28
SKIL-208ENST00000477216 PLEKHG5O94827 1062 aa35.51■■■■□ 3.28
SKIL-208ENST00000477216 FAM98CQ17RN3 349 aaKnown RBP35.51■■■■□ 3.28
SKIL-208ENST00000477216 COL14A1Q05707 1796 aaKnown RBP35.51■■■■□ 3.27
SKIL-208ENST00000477216 ADGRB2O60241 1585 aa35.51■■■■□ 3.27
SKIL-208ENST00000477216 SAFB2Q14151 953 aaKnown RBP eCLIP35.49■■■■□ 3.27
SKIL-208ENST00000477216 PMFBP1Q8TBY8 1022 aa35.49■■■■□ 3.27
SKIL-208ENST00000477216 RGPD1P0DJD0 1748 aa35.47■■■■□ 3.27
SKIL-208ENST00000477216 NRAPQ86VF7 1730 aa35.46■■■■□ 3.27
SKIL-208ENST00000477216 ARHGEF28Q8N1W1 1705 aaKnown RBP35.43■■■■□ 3.26
SKIL-208ENST00000477216 SPATA31A5Q5VU36 1347 aa35.42■■■■□ 3.26
SKIL-208ENST00000477216 SPATA31A7Q8IWB4 1347 aa35.42■■■■□ 3.26
SKIL-208ENST00000477216 CARD11Q9BXL7 1154 aa35.42■■■■□ 3.26
SKIL-208ENST00000477216 TRPM3Q9HCF6 1732 aaPredicted RBP35.42■■■■□ 3.26
SKIL-208ENST00000477216 DISP2A7MBM2 1401 aa35.41■■■■□ 3.26
SKIL-208ENST00000477216 PSDA5PKW4 1024 aaPredicted RBP35.41■■■■□ 3.26
SKIL-208ENST00000477216 ALS2Q96Q42 1657 aa35.4■■■■□ 3.26
SKIL-208ENST00000477216 NGDNQ8NEJ9 315 aaKnown RBP35.38■■■■□ 3.25
SKIL-208ENST00000477216 TULP4Q9NRJ4 1543 aa35.37■■■■□ 3.25
SKIL-208ENST00000477216 EN1Q05925 392 aaPredicted RBP35.37■■■■□ 3.25
SKIL-208ENST00000477216 PRDM11Q9NQV5 511 aa35.37■■■■□ 3.25
SKIL-208ENST00000477216 WASLO00401 505 aaPredicted RBP35.34■■■■□ 3.25
SKIL-208ENST00000477216 FAM196AQ6ZSG2 479 aa35.34■■■■□ 3.25
SKIL-208ENST00000477216 PARD3Q8TEW0 1356 aa35.34■■■■□ 3.25
SKIL-208ENST00000477216 PAK3O75914 559 aaPredicted RBP35.33■■■■□ 3.25
SKIL-208ENST00000477216 CENPJQ9HC77 1338 aaPredicted RBP35.32■■■■□ 3.24
SKIL-208ENST00000477216 HIRIP3Q9BW71 556 aaPredicted RBP35.31■■■■□ 3.24
SKIL-208ENST00000477216 THSD7AQ9UPZ6 1657 aa35.3■■■■□ 3.24
SKIL-208ENST00000477216 MINK1Q8N4C8 1332 aaPredicted RBP35.3■■■■□ 3.24
SKIL-208ENST00000477216 R3HDM1Q15032 1099 aaKnown RBP35.28■■■■□ 3.24
SKIL-208ENST00000477216 SPATA31A1Q5TZJ5 1347 aa35.26■■■■□ 3.23
SKIL-208ENST00000477216 ITSN1Q15811 1721 aa35.26■■■■□ 3.23
SKIL-208ENST00000477216 ATP7BP35670 1465 aa35.25■■■■□ 3.23
SKIL-208ENST00000477216 PRR36Q9H6K5 1346 aa35.25■■■■□ 3.23
SKIL-208ENST00000477216 TNS1Q9HBL0 1735 aaKnown RBP35.23■■■■□ 3.23
SKIL-208ENST00000477216 QRICH2Q9H0J4 1663 aa35.22■■■■□ 3.23
SKIL-208ENST00000477216 CRYBG1Q9Y4K1 1723 aa35.22■■■■□ 3.23
SKIL-208ENST00000477216 C11orf95C9JLR9 678 aaPredicted RBP35.2■■■■□ 3.23
SKIL-208ENST00000477216 FAM182BQ5T319 152 aa35.2■■■■□ 3.23
SKIL-208ENST00000477216 USP47Q96K76 1375 aa35.2■■■■□ 3.23
SKIL-208ENST00000477216 EZH2Q15910 746 aaKnown RBP35.19■■■■□ 3.22
SKIL-208ENST00000477216 KIAA0232Q92628 1395 aa35.19■■■■□ 3.22
SKIL-208ENST00000477216 CAMKK2Q96RR4 588 aa35.19■■■■□ 3.22
SKIL-208ENST00000477216 EVA1CP58658 441 aa35.18■■■■□ 3.22
SKIL-208ENST00000477216 PDE3BQ13370 1112 aa35.18■■■■□ 3.22
SKIL-208ENST00000477216 NBPF14Q5TI25 921 aa35.18■■■■□ 3.22
SKIL-208ENST00000477216 BARGINQ6ZT62 677 aa35.18■■■■□ 3.22
SKIL-208ENST00000477216 TRIM37O94972 964 aa35.17■■■■□ 3.22
SKIL-208ENST00000477216 APBA3O96018 575 aa35.16■■■■□ 3.22
SKIL-208ENST00000477216 STRN4Q9NRL3 753 aa35.16■■■■□ 3.22
SKIL-208ENST00000477216 NUDT16Q96DE0 195 aaKnown RBP35.15■■■■□ 3.22
SKIL-208ENST00000477216 SBNO2Q9Y2G9 1366 aa35.13■■■■□ 3.21
SKIL-208ENST00000477216 ST20-MTHFSA0A0A6YYL1 179 aa35.12■■■■□ 3.21
SKIL-208ENST00000477216 THRAP3Q9Y2W1 955 aaKnown RBP35.1■■■■□ 3.21
SKIL-208ENST00000477216 PHRF1Q9P1Y6 1649 aaKnown RBP35.1■■■■□ 3.21
SKIL-208ENST00000477216 DCAF8L1A6NGE4 600 aa35.09■■■■□ 3.21
SKIL-208ENST00000477216 CHRNA2Q15822 529 aa35.09■■■■□ 3.21
SKIL-208ENST00000477216 CDK19Q9BWU1 502 aa35.09■■■■□ 3.21
SKIL-208ENST00000477216 ZC3H6P61129 1189 aaKnown RBP35.08■■■■□ 3.21
SKIL-208ENST00000477216 CCDC61Q9Y6R9 512 aa35.08■■■■□ 3.21
SKIL-208ENST00000477216 TCP11L2Q8N4U5 519 aa35.07■■■■□ 3.2
SKIL-208ENST00000477216 POLR3AO14802 1390 aaPredicted RBP35.07■■■■□ 3.2
SKIL-208ENST00000477216 SSH2Q76I76 1423 aa35.06■■■■□ 3.2
SKIL-208ENST00000477216 USP35Q9P2H5 1018 aa35.06■■■■□ 3.2
SKIL-208ENST00000477216 EVC2Q86UK5 1308 aa35.06■■■■□ 3.2
SKIL-208ENST00000477216 TESK2Q96S53 571 aa35.05■■■■□ 3.2
SKIL-208ENST00000477216 CPDO75976 1380 aa35.03■■■■□ 3.2
SKIL-208ENST00000477216 EIF4G2P78344 907 aaKnown RBP eCLIP35.03■■■■□ 3.2
SKIL-208ENST00000477216 SRPK2P78362 688 aaKnown RBP35.02■■■■□ 3.2
SKIL-208ENST00000477216 ABTB2Q8N961 1025 aa35.02■■■■□ 3.2
SKIL-208ENST00000477216 PLEKHG3A1L390 1219 aa35.01■■■■□ 3.2
SKIL-208ENST00000477216 ACEP12821 1306 aa35.01■■■■□ 3.19
SKIL-208ENST00000477216 RREB1Q92766 1687 aa35■■■■□ 3.19
SKIL-208ENST00000477216 NLRP13Q86W25 1043 aa34.99■■■■□ 3.19
SKIL-208ENST00000477216 CABP2Q9NPB3 220 aa34.99■■■■□ 3.19
SKIL-208ENST00000477216 BRD4O60885 1362 aaPredicted RBP34.99■■■■□ 3.19
SKIL-208ENST00000477216 HSPA5P11021 654 aaKnown RBP34.98■■■■□ 3.19
SKIL-208ENST00000477216 SPON1Q9HCB6 807 aa34.98■■■■□ 3.19
SKIL-208ENST00000477216 PPP1R1BQ9UD71 204 aaPredicted RBP34.98■■■■□ 3.19
SKIL-208ENST00000477216 NUTM2GQ5VZR2 741 aa34.97■■■■□ 3.19
SKIL-208ENST00000477216 SLC24A1O60721 1099 aa34.96■■■■□ 3.19
SKIL-208ENST00000477216 YY1P25490 414 aa34.96■■■■□ 3.19
SKIL-208ENST00000477216 ZEB1P37275 1124 aaPredicted RBP34.96■■■■□ 3.19
SKIL-208ENST00000477216 LARP1Q6PKG0 1096 aaKnown RBP34.95■■■■□ 3.19
SKIL-208ENST00000477216 NRKQ7Z2Y5 1582 aa34.94■■■■□ 3.18
SKIL-208ENST00000477216 TOPAZ1Q8N9V7 1692 aa34.94■■■■□ 3.18
SKIL-208ENST00000477216 NUP188Q5SRE5 1749 aa34.93■■■■□ 3.18
SKIL-208ENST00000477216 USP19O94966 1318 aa34.93■■■■□ 3.18
SKIL-208ENST00000477216 CAMTA1Q9Y6Y1 1673 aa34.92■■■■□ 3.18
SKIL-208ENST00000477216 NINLQ9Y2I6 1382 aa34.9■■■■□ 3.18
SKIL-208ENST00000477216 TMF1P82094 1093 aa34.9■■■■□ 3.18
SKIL-208ENST00000477216 LMO7Q8WWI1 1683 aa34.89■■■■□ 3.18
SKIL-208ENST00000477216 KCNQ2O43526 872 aa34.89■■■■□ 3.18
SKIL-208ENST00000477216 PARP4Q9UKK3 1724 aaKnown RBP34.89■■■■□ 3.18
SKIL-208ENST00000477216 GCP02774 474 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms